RNA–Protein interactions for RNA: ENST00000407422.7

SMARCB1-204, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SMARCB1, Length 1,643 nt, Biotype protein coding, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCB1-204ENST00000407422 SECISBP2LQ93073 1101 aaKnown RBP20.38■□□□□ 0.85
SMARCB1-204ENST00000407422 CISHQ9NSE2 258 aa20.38■□□□□ 0.85
SMARCB1-204ENST00000407422 OSER1Q9NX31 292 aa20.38■□□□□ 0.85
SMARCB1-204ENST00000407422 HOOK1Q9UJC3 728 aaKnown RBP20.38■□□□□ 0.85
SMARCB1-204ENST00000407422 MAN1B1Q9UKM7 699 aa20.38■□□□□ 0.85
SMARCB1-204ENST00000407422 LAMA1P25391 3075 aa20.37■□□□□ 0.85
SMARCB1-204ENST00000407422 E2F8A0AVK6 867 aa20.37■□□□□ 0.85
SMARCB1-204ENST00000407422 STX10O60499 249 aa20.37■□□□□ 0.85
SMARCB1-204ENST00000407422 TLR5O60602 858 aa20.37■□□□□ 0.85
SMARCB1-204ENST00000407422 CD44P16070 742 aaKnown RBP20.37■□□□□ 0.85
SMARCB1-204ENST00000407422 ACO1P21399 889 aaKnown RBP20.37■□□□□ 0.85
SMARCB1-204ENST00000407422 CNR2P34972 360 aa20.37■□□□□ 0.85
SMARCB1-204ENST00000407422 SLC6A11P48066 632 aa20.37■□□□□ 0.85
SMARCB1-204ENST00000407422 MESP2Q0VG99 397 aa20.37■□□□□ 0.85
SMARCB1-204ENST00000407422 SFTPA1Q8IWL2 248 aa20.37■□□□□ 0.85
SMARCB1-204ENST00000407422 HEXIM2Q96MH2 286 aaKnown RBP20.37■□□□□ 0.85
SMARCB1-204ENST00000407422 HHIPQ96QV1 700 aa20.37■□□□□ 0.85
SMARCB1-204ENST00000407422 NACA2Q9H009 215 aa20.37■□□□□ 0.85
SMARCB1-204ENST00000407422 PARD6AQ9NPB6 346 aa20.37■□□□□ 0.85
SMARCB1-204ENST00000407422 TLR8Q9NR97 1041 aaKnown RBP20.37■□□□□ 0.85
SMARCB1-204ENST00000407422 GMEB2Q9UKD1 530 aa20.37■□□□□ 0.85
SMARCB1-204ENST00000407422 SCML2Q9UQR0 700 aa20.37■□□□□ 0.85
SMARCB1-204ENST00000407422 MYO18AQ92614 2054 aaKnown RBP20.36■□□□□ 0.85
SMARCB1-204ENST00000407422 K7EQS6 105 aa20.36■□□□□ 0.85
SMARCB1-204ENST00000407422 IRF1P10914 325 aa20.36■□□□□ 0.85
SMARCB1-204ENST00000407422 LRRC63Q05C16 580 aa20.36■□□□□ 0.85
SMARCB1-204ENST00000407422 LAIR1Q6GTX8 287 aa20.36■□□□□ 0.85
SMARCB1-204ENST00000407422 C12orf40Q86WS4 652 aa20.36■□□□□ 0.85
SMARCB1-204ENST00000407422 SLC4A11Q8NBS3 891 aa20.36■□□□□ 0.85
SMARCB1-204ENST00000407422 NMUR1Q9HB89 426 aa20.36■□□□□ 0.85
SMARCB1-204ENST00000407422 BMP6P22004 513 aa20.35■□□□□ 0.85
SMARCB1-204ENST00000407422 RAD23BP54727 409 aa20.35■□□□□ 0.85
SMARCB1-204ENST00000407422 SEC13P55735 322 aa20.35■□□□□ 0.85
SMARCB1-204ENST00000407422 LY6G5CQ5SRR4 150 aa20.35■□□□□ 0.85
SMARCB1-204ENST00000407422 BBS7Q8IWZ6 715 aa20.35■□□□□ 0.85
SMARCB1-204ENST00000407422 ELOA2Q8IYF1 753 aaPredicted RBP20.35■□□□□ 0.85
SMARCB1-204ENST00000407422 SLC35C1Q96A29 364 aa20.35■□□□□ 0.85
SMARCB1-204ENST00000407422 FAXDC2Q96IV6 333 aa20.35■□□□□ 0.85
SMARCB1-204ENST00000407422 DUSP16Q9BY84 665 aa20.35■□□□□ 0.85
SMARCB1-204ENST00000407422 TBC1D14Q9P2M4 693 aa20.35■□□□□ 0.85
SMARCB1-204ENST00000407422 ARMCX3Q9UH62 379 aaPredicted RBP20.35■□□□□ 0.85
SMARCB1-204ENST00000407422 COQ4Q9Y3A0 265 aa20.35■□□□□ 0.85
SMARCB1-204ENST00000407422 SH3BP1Q9Y3L3 701 aa20.35■□□□□ 0.85
SMARCB1-204ENST00000407422 ADH5P11766 374 aa20.35■□□□□ 0.85
SMARCB1-204ENST00000407422 SPEM2Q0P670 501 aa20.35■□□□□ 0.85
SMARCB1-204ENST00000407422 C2orf27AQ580R0 203 aa20.35■□□□□ 0.85
SMARCB1-204ENST00000407422 CEP68Q76N32 757 aa20.35■□□□□ 0.85
SMARCB1-204ENST00000407422 SYT13Q7L8C5 426 aa20.35■□□□□ 0.85
SMARCB1-204ENST00000407422 TMEM176AQ96HP8 235 aa20.35■□□□□ 0.85
SMARCB1-204ENST00000407422 PNPLA8Q9NP80 782 aa20.35■□□□□ 0.85
SMARCB1-204ENST00000407422 CYLDQ9NQC7 956 aa20.35■□□□□ 0.85
SMARCB1-204ENST00000407422 NUDT5Q9UKK9 219 aa20.35■□□□□ 0.85
SMARCB1-204ENST00000407422 A0A1W2PQH9 124 aa20.34■□□□□ 0.85
SMARCB1-204ENST00000407422 PSMA7O14818 248 aa20.34■□□□□ 0.85
SMARCB1-204ENST00000407422 ADH1CP00326 375 aa20.34■□□□□ 0.85
SMARCB1-204ENST00000407422 KIF11P52732 1056 aa20.34■□□□□ 0.85
SMARCB1-204ENST00000407422 DMC1Q14565 340 aa20.34■□□□□ 0.85
SMARCB1-204ENST00000407422 CAMKK1Q8N5S9 505 aa20.34■□□□□ 0.85
SMARCB1-204ENST00000407422 FAM160A2Q8N612 972 aaPredicted RBP20.34■□□□□ 0.85
SMARCB1-204ENST00000407422 USP33Q8TEY7 942 aa20.34■□□□□ 0.85
SMARCB1-204ENST00000407422 DHTKD1Q96HY7 919 aaPredicted RBP20.34■□□□□ 0.85
SMARCB1-204ENST00000407422 KLF16Q9BXK1 252 aaPredicted RBP20.34■□□□□ 0.85
SMARCB1-204ENST00000407422 GTPBP4Q9BZE4 634 aaKnown RBP20.34■□□□□ 0.85
SMARCB1-204ENST00000407422 USP18Q9UMW8 372 aa20.34■□□□□ 0.85
SMARCB1-204ENST00000407422 CCDC163A0A0D9SF12 145 aa20.33■□□□□ 0.84
SMARCB1-204ENST00000407422 GREM1O60565 184 aa20.33■□□□□ 0.84
SMARCB1-204ENST00000407422 RETP07949 1114 aa20.33■□□□□ 0.84
SMARCB1-204ENST00000407422 STIM1Q13586 685 aa20.33■□□□□ 0.84
SMARCB1-204ENST00000407422 KLHL10Q6JEL2 608 aa20.33■□□□□ 0.84
SMARCB1-204ENST00000407422 ARHGAP30Q7Z6I6 1101 aaPredicted RBP20.33■□□□□ 0.84
SMARCB1-204ENST00000407422 SCD5Q86SK9 330 aa20.33■□□□□ 0.84
SMARCB1-204ENST00000407422 GPR161Q8N6U8 529 aaKnown RBP20.33■□□□□ 0.84
SMARCB1-204ENST00000407422 GAB3Q8WWW8 586 aa20.33■□□□□ 0.84
SMARCB1-204ENST00000407422 DUSP9Q99956 384 aaKnown RBP20.33■□□□□ 0.84
SMARCB1-204ENST00000407422 DNAI2Q9GZS0 605 aa20.33■□□□□ 0.84
SMARCB1-204ENST00000407422 PPP1R3GB7ZBB8 358 aa20.32■□□□□ 0.84
SMARCB1-204ENST00000407422 BIN1O00499 593 aa20.32■□□□□ 0.84
SMARCB1-204ENST00000407422 MDM4O15151 490 aa20.32■□□□□ 0.84
SMARCB1-204ENST00000407422 RPP40O75818 363 aaKnown RBP20.32■□□□□ 0.84
SMARCB1-204ENST00000407422 RARGP13631 454 aa20.32■□□□□ 0.84
SMARCB1-204ENST00000407422 ATP5C1P36542 298 aaKnown RBP20.32■□□□□ 0.84
SMARCB1-204ENST00000407422 LRMPQ12912 555 aa20.32■□□□□ 0.84
SMARCB1-204ENST00000407422 CUL2Q13617 745 aa20.32■□□□□ 0.84
SMARCB1-204ENST00000407422 TMEM25Q86YD3 366 aa20.32■□□□□ 0.84
SMARCB1-204ENST00000407422 TTC39CQ8N584 583 aa20.32■□□□□ 0.84
SMARCB1-204ENST00000407422 CCDC33Q8N5R6 958 aa20.32■□□□□ 0.84
SMARCB1-204ENST00000407422 NAT16Q8N8M0 369 aa20.32■□□□□ 0.84
SMARCB1-204ENST00000407422 ACDQ96AP0 544 aa20.32■□□□□ 0.84
SMARCB1-204ENST00000407422 OTUB2Q96DC9 234 aa20.32■□□□□ 0.84
SMARCB1-204ENST00000407422 PNKPQ96T60 521 aa20.32■□□□□ 0.84
SMARCB1-204ENST00000407422 MTPAPQ9NVV4 582 aaKnown RBP eCLIP20.32■□□□□ 0.84
SMARCB1-204ENST00000407422 USP3Q9Y6I4 520 aa20.32■□□□□ 0.84
SMARCB1-204ENST00000407422 KAT7O95251 611 aa20.31■□□□□ 0.84
SMARCB1-204ENST00000407422 EIF2DP41214 584 aaKnown RBP20.31■□□□□ 0.84
SMARCB1-204ENST00000407422 KDSRQ06136 332 aa20.31■□□□□ 0.84
SMARCB1-204ENST00000407422 RSPO4Q2I0M5 234 aaPredicted RBP20.31■□□□□ 0.84
SMARCB1-204ENST00000407422 TTI2Q6NXR4 508 aa20.31■□□□□ 0.84
SMARCB1-204ENST00000407422 CCDC186Q7Z3E2 898 aa20.31■□□□□ 0.84
SMARCB1-204ENST00000407422 NAGPAQ9UK23 515 aa20.31■□□□□ 0.84
SMARCB1-204ENST00000407422 SPTBN2O15020 2390 aa20.31■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 52.4 ms