RNA–Protein interactions for RNA: ENST00000407298.7

APOBEC3B-204, Transcript of apolipoprotein B mRNA editing enzyme catalytic subunit 3B, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene APOBEC3B, Length 1,282 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOBEC3B-204ENST00000407298 ATXN2Q99700 1313 aaKnown RBP13.06□□□□□ -0.32
APOBEC3B-204ENST00000407298 WDFY3Q8IZQ1 3526 aa13.06□□□□□ -0.32
APOBEC3B-204ENST00000407298 MYO18AQ92614 2054 aaKnown RBP13.06□□□□□ -0.32
APOBEC3B-204ENST00000407298 ANTXRLA6NF34 631 aa13.05□□□□□ -0.32
APOBEC3B-204ENST00000407298 NDUFS2O75306 463 aa13.05□□□□□ -0.32
APOBEC3B-204ENST00000407298 CHRM1P11229 460 aaPredicted RBP13.05□□□□□ -0.32
APOBEC3B-204ENST00000407298 PTPN1P18031 435 aaKnown RBP13.05□□□□□ -0.32
APOBEC3B-204ENST00000407298 GABRG2P18507 467 aa13.05□□□□□ -0.32
APOBEC3B-204ENST00000407298 TNNC1P63316 161 aa13.05□□□□□ -0.32
APOBEC3B-204ENST00000407298 MESP2Q0VG99 397 aa13.05□□□□□ -0.32
APOBEC3B-204ENST00000407298 ANO4Q32M45 955 aa13.05□□□□□ -0.32
APOBEC3B-204ENST00000407298 C10orf76Q5T2E6 689 aa13.05□□□□□ -0.32
APOBEC3B-204ENST00000407298 CCDC73Q6ZRK6 1079 aa13.05□□□□□ -0.32
APOBEC3B-204ENST00000407298 WDR49Q8IV35 697 aa13.05□□□□□ -0.32
APOBEC3B-204ENST00000407298 NAT16Q8N8M0 369 aa13.05□□□□□ -0.32
APOBEC3B-204ENST00000407298 TERB1Q8NA31 727 aa13.05□□□□□ -0.32
APOBEC3B-204ENST00000407298 FOXJ1Q92949 421 aa13.05□□□□□ -0.32
APOBEC3B-204ENST00000407298 XPO6Q96QU8 1125 aaKnown RBP13.05□□□□□ -0.32
APOBEC3B-204ENST00000407298 SPHK2Q9NRA0 654 aa13.05□□□□□ -0.32
APOBEC3B-204ENST00000407298 PANK4Q9NVE7 773 aa13.05□□□□□ -0.32
APOBEC3B-204ENST00000407298 COMMD8Q9NX08 183 aa13.05□□□□□ -0.32
APOBEC3B-204ENST00000407298 CALCOCO1Q9P1Z2 691 aa13.05□□□□□ -0.32
APOBEC3B-204ENST00000407298 FBXO2Q9UK22 296 aaPredicted RBP13.05□□□□□ -0.32
APOBEC3B-204ENST00000407298 STARD13Q9Y3M8 1113 aa13.05□□□□□ -0.32
APOBEC3B-204ENST00000407298 ATP8B3O60423 1300 aa13.05□□□□□ -0.32
APOBEC3B-204ENST00000407298 TNRC6BQ9UPQ9 1833 aaKnown RBP13.04□□□□□ -0.32
APOBEC3B-204ENST00000407298 STX6O43752 255 aa13.04□□□□□ -0.32
APOBEC3B-204ENST00000407298 TULP3O75386 442 aa13.04□□□□□ -0.32
APOBEC3B-204ENST00000407298 CD59P13987 128 aa13.04□□□□□ -0.32
APOBEC3B-204ENST00000407298 TUBP50607 506 aa13.04□□□□□ -0.32
APOBEC3B-204ENST00000407298 IFRD2Q12894 506 aaPredicted RBP13.04□□□□□ -0.32
APOBEC3B-204ENST00000407298 PLEKHG6Q3KR16 790 aa13.04□□□□□ -0.32
APOBEC3B-204ENST00000407298 WDR45BQ5MNZ6 344 aa13.04□□□□□ -0.32
APOBEC3B-204ENST00000407298 SNX30Q5VWJ9 437 aa13.04□□□□□ -0.32
APOBEC3B-204ENST00000407298 USP49Q70CQ1 688 aa13.04□□□□□ -0.32
APOBEC3B-204ENST00000407298 TRAPPC11Q7Z392 1133 aa13.04□□□□□ -0.32
APOBEC3B-204ENST00000407298 ETFBKMTQ8IXQ9 262 aa13.04□□□□□ -0.32
APOBEC3B-204ENST00000407298 CCDC65Q8IXS2 484 aa13.04□□□□□ -0.32
APOBEC3B-204ENST00000407298 RGL4Q8IZJ4 473 aa13.04□□□□□ -0.32
APOBEC3B-204ENST00000407298 PHTF2Q8N3S3 785 aa13.04□□□□□ -0.32
APOBEC3B-204ENST00000407298 DEFB119Q8N690 84 aa13.04□□□□□ -0.32
APOBEC3B-204ENST00000407298 TRIML1Q8N9V2 468 aa13.04□□□□□ -0.32
APOBEC3B-204ENST00000407298 OR5B17Q8NGF7 314 aa13.04□□□□□ -0.32
APOBEC3B-204ENST00000407298 ADAMTS14Q8WXS8 1223 aa13.04□□□□□ -0.32
APOBEC3B-204ENST00000407298 USP28Q96RU2 1077 aa13.04□□□□□ -0.32
APOBEC3B-204ENST00000407298 NACA2Q9H009 215 aa13.04□□□□□ -0.32
APOBEC3B-204ENST00000407298 APOBEC2Q9Y235 224 aaKnown RBP13.04□□□□□ -0.32
APOBEC3B-204ENST00000407298 MYOFQ9NZM1 2061 aa13.03□□□□□ -0.32
APOBEC3B-204ENST00000407298 IGSF10Q6WRI0 2623 aa13.03□□□□□ -0.32
APOBEC3B-204ENST00000407298 IGHV1OR15-9A0A0B4J2B8 117 aa13.03□□□□□ -0.32
APOBEC3B-204ENST00000407298 FRMD3A2A2Y4 597 aa13.03□□□□□ -0.32
APOBEC3B-204ENST00000407298 SCAMP3O14828 347 aaKnown RBP13.03□□□□□ -0.32
APOBEC3B-204ENST00000407298 COCHO43405 550 aa13.03□□□□□ -0.32
APOBEC3B-204ENST00000407298 TNNI1P19237 187 aa13.03□□□□□ -0.32
APOBEC3B-204ENST00000407298 CASP5P51878 434 aa13.03□□□□□ -0.32
APOBEC3B-204ENST00000407298 GOLGA8FQ08AF8 430 aa13.03□□□□□ -0.32
APOBEC3B-204ENST00000407298 GOLGA8DPQ0D2H9 430 aa13.03□□□□□ -0.32
APOBEC3B-204ENST00000407298 SCAPQ12770 1279 aa13.03□□□□□ -0.32
APOBEC3B-204ENST00000407298 WDR72Q3MJ13 1102 aa13.03□□□□□ -0.32
APOBEC3B-204ENST00000407298 SCARA3Q6AZY7 606 aa13.03□□□□□ -0.32
APOBEC3B-204ENST00000407298 GRAMD4Q6IC98 578 aa13.03□□□□□ -0.32
APOBEC3B-204ENST00000407298 CHPFQ8IZ52 775 aa13.03□□□□□ -0.32
APOBEC3B-204ENST00000407298 B3GALNT2Q8NCR0 500 aa13.03□□□□□ -0.32
APOBEC3B-204ENST00000407298 SCFD1Q8WVM8 642 aa13.03□□□□□ -0.32
APOBEC3B-204ENST00000407298 ZNF419Q96HQ0 510 aaPredicted RBP13.03□□□□□ -0.32
APOBEC3B-204ENST00000407298 HSPA12BQ96MM6 686 aa13.03□□□□□ -0.32
APOBEC3B-204ENST00000407298 MRPL45Q9BRJ2 306 aaKnown RBP13.03□□□□□ -0.32
APOBEC3B-204ENST00000407298 LRRC27Q9C0I9 530 aa13.03□□□□□ -0.32
APOBEC3B-204ENST00000407298 CCDC86Q9H6F5 360 aaKnown RBP13.03□□□□□ -0.32
APOBEC3B-204ENST00000407298 ZDHHC4Q9NPG8 344 aa13.03□□□□□ -0.32
APOBEC3B-204ENST00000407298 FSCN3Q9NQT6 498 aa13.03□□□□□ -0.32
APOBEC3B-204ENST00000407298 WDR35Q9P2L0 1181 aa13.03□□□□□ -0.32
APOBEC3B-204ENST00000407298 CHORDC1Q9UHD1 332 aaPredicted RBP13.03□□□□□ -0.32
APOBEC3B-204ENST00000407298 GPSM3Q9Y4H4 160 aa13.03□□□□□ -0.32
APOBEC3B-204ENST00000407298 SRPRBQ9Y5M8 271 aaKnown RBP13.03□□□□□ -0.32
APOBEC3B-204ENST00000407298 MORC2Q9Y6X9 1032 aaPredicted RBP13.03□□□□□ -0.32
APOBEC3B-204ENST00000407298 GCN1Q92616 2671 aaKnown RBP13.02□□□□□ -0.32
APOBEC3B-204ENST00000407298 CEP192Q8TEP8 1941 aa13.02□□□□□ -0.32
APOBEC3B-204ENST00000407298 A0A1W2PQF6 199 aa13.02□□□□□ -0.33
APOBEC3B-204ENST00000407298 A8MXQ7 604 aa13.02□□□□□ -0.33
APOBEC3B-204ENST00000407298 GFRA2O00451 464 aa13.02□□□□□ -0.33
APOBEC3B-204ENST00000407298 SH3BP5O60239 455 aa13.02□□□□□ -0.33
APOBEC3B-204ENST00000407298 CAPNS1P04632 268 aa13.02□□□□□ -0.33
APOBEC3B-204ENST00000407298 STAT6P42226 847 aa13.02□□□□□ -0.33
APOBEC3B-204ENST00000407298 FAM193AP78312 1265 aa13.02□□□□□ -0.33
APOBEC3B-204ENST00000407298 TRPC3Q13507 836 aa13.02□□□□□ -0.33
APOBEC3B-204ENST00000407298 E2F5Q15329 346 aa13.02□□□□□ -0.33
APOBEC3B-204ENST00000407298 CCNI2Q6ZMN8 369 aaPredicted RBP13.02□□□□□ -0.33
APOBEC3B-204ENST00000407298 TMEM25Q86YD3 366 aa13.02□□□□□ -0.33
APOBEC3B-204ENST00000407298 SLC41A1Q8IVJ1 513 aa13.02□□□□□ -0.33
APOBEC3B-204ENST00000407298 NAXDQ8IW45 347 aa13.02□□□□□ -0.33
APOBEC3B-204ENST00000407298 HSCBQ8IWL3 235 aa13.02□□□□□ -0.33
APOBEC3B-204ENST00000407298 IPO4Q8TEX9 1081 aaKnown RBP13.02□□□□□ -0.33
APOBEC3B-204ENST00000407298 FAM84AQ96KN4 292 aa13.02□□□□□ -0.33
APOBEC3B-204ENST00000407298 CLIC6Q96NY7 704 aa13.02□□□□□ -0.33
APOBEC3B-204ENST00000407298 ZNF518BQ9C0D4 1074 aa13.02□□□□□ -0.33
APOBEC3B-204ENST00000407298 UTP3Q9NQZ2 479 aaKnown RBP eCLIP13.02□□□□□ -0.33
APOBEC3B-204ENST00000407298 DNAJC17Q9NVM6 304 aaKnown RBP13.02□□□□□ -0.33
APOBEC3B-204ENST00000407298 HSPBP1Q9NZL4 362 aa13.02□□□□□ -0.33
APOBEC3B-204ENST00000407298 LSM7Q9UK45 103 aaKnown RBP13.02□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms