RNA–Protein interactions for RNA: ENST00000405547.7

SNED1-205, Transcript of sushi, nidogen and EGF like domains 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene SNED1, Length 7,986 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNED1-205ENST00000405547 FOXR1Q6PIV2 292 aa13.77□□□□□ -0.2
SNED1-205ENST00000405547 BBS7Q8IWZ6 715 aa13.77□□□□□ -0.2
SNED1-205ENST00000405547 ZCCHC9Q8N567 271 aaKnown RBP13.77□□□□□ -0.2
SNED1-205ENST00000405547 C2orf69Q8N8R5 385 aa13.77□□□□□ -0.2
SNED1-205ENST00000405547 GMCL1P1Q8NEA9 526 aa13.77□□□□□ -0.2
SNED1-205ENST00000405547 RNPEPL1Q9HAU8 725 aa13.77□□□□□ -0.2
SNED1-205ENST00000405547 ZNF70Q9UC06 446 aaPredicted RBP13.77□□□□□ -0.2
SNED1-205ENST00000405547 SAC3D1A6NKF1 404 aa13.77□□□□□ -0.2
SNED1-205ENST00000405547 M0QYT0 321 aa13.77□□□□□ -0.2
SNED1-205ENST00000405547 SLC25A27O95847 323 aa13.77□□□□□ -0.2
SNED1-205ENST00000405547 MPOP05164 745 aa13.77□□□□□ -0.2
SNED1-205ENST00000405547 OASLQ15646 514 aaKnown RBP13.77□□□□□ -0.2
SNED1-205ENST00000405547 ERMARDQ5T6L9 678 aa13.77□□□□□ -0.2
SNED1-205ENST00000405547 SERBP1Q8NC51 408 aaKnown RBP eCLIP13.77□□□□□ -0.2
SNED1-205ENST00000405547 SLC5A5Q92911 643 aa13.77□□□□□ -0.2
SNED1-205ENST00000405547 BRD8Q9H0E9 1235 aa13.77□□□□□ -0.2
SNED1-205ENST00000405547 AVENQ9NQS1 362 aaPredicted RBP13.77□□□□□ -0.2
SNED1-205ENST00000405547 RRN3P2A6NIE6 340 aa13.77□□□□□ -0.21
SNED1-205ENST00000405547 SKAP2O75563 359 aaPredicted RBP13.77□□□□□ -0.21
SNED1-205ENST00000405547 CACHD1Q5VU97 1274 aa13.77□□□□□ -0.21
SNED1-205ENST00000405547 WDR49Q8IV35 697 aa13.77□□□□□ -0.21
SNED1-205ENST00000405547 ZKSCAN4Q969J2 545 aaPredicted RBP13.77□□□□□ -0.21
SNED1-205ENST00000405547 OXNAD1Q96HP4 312 aaPredicted RBP13.77□□□□□ -0.21
SNED1-205ENST00000405547 TMEM79Q9BSE2 394 aa13.77□□□□□ -0.21
SNED1-205ENST00000405547 RHOBTB1O94844 696 aa13.77□□□□□ -0.21
SNED1-205ENST00000405547 GSNP06396 782 aa13.77□□□□□ -0.21
SNED1-205ENST00000405547 GEMP55040 296 aa13.77□□□□□ -0.21
SNED1-205ENST00000405547 TRAF7Q6Q0C0 670 aa13.77□□□□□ -0.21
SNED1-205ENST00000405547 DDIT4Q9NX09 232 aa13.77□□□□□ -0.21
SNED1-205ENST00000405547 PCYOX1Q9UHG3 505 aa13.77□□□□□ -0.21
SNED1-205ENST00000405547 TRMT6Q9UJA5 497 aaKnown RBP13.77□□□□□ -0.21
SNED1-205ENST00000405547 ACTL7BQ9Y614 415 aa13.77□□□□□ -0.21
SNED1-205ENST00000405547 GCNT1Q02742 428 aa13.77□□□□□ -0.21
SNED1-205ENST00000405547 SLC45A4Q5BKX6 768 aa13.77□□□□□ -0.21
SNED1-205ENST00000405547 IRGCQ6NXR0 463 aa13.77□□□□□ -0.21
SNED1-205ENST00000405547 PRMT9Q6P2P2 845 aa13.77□□□□□ -0.21
SNED1-205ENST00000405547 KYAT3Q6YP21 454 aaKnown RBP13.77□□□□□ -0.21
SNED1-205ENST00000405547 C4orf19Q8IY42 314 aa13.77□□□□□ -0.21
SNED1-205ENST00000405547 SLC25A41Q8N5S1 370 aa13.77□□□□□ -0.21
SNED1-205ENST00000405547 RNF112Q9ULX5 631 aa13.77□□□□□ -0.21
SNED1-205ENST00000405547 V9GYQ6 96 aa13.77□□□□□ -0.21
SNED1-205ENST00000405547 A0A087X0B3 334 aa13.76□□□□□ -0.21
SNED1-205ENST00000405547 SPDYE5A6NIY4 337 aa13.76□□□□□ -0.21
SNED1-205ENST00000405547 TRDMT1O14717 391 aaKnown RBP13.76□□□□□ -0.21
SNED1-205ENST00000405547 RARAP10276 462 aa13.76□□□□□ -0.21
SNED1-205ENST00000405547 TAF6P49848 677 aa13.76□□□□□ -0.21
SNED1-205ENST00000405547 SLC12A3P55017 1021 aa13.76□□□□□ -0.21
SNED1-205ENST00000405547 LAMC2Q13753 1193 aa13.76□□□□□ -0.21
SNED1-205ENST00000405547 TTLL9Q3SXZ7 439 aa13.76□□□□□ -0.21
SNED1-205ENST00000405547 SPDYE7PQ495Y7 208 aa13.76□□□□□ -0.21
SNED1-205ENST00000405547 C2CD6Q53TS8 623 aa13.76□□□□□ -0.21
SNED1-205ENST00000405547 LPCAT2Q7L5N7 544 aa13.76□□□□□ -0.21
SNED1-205ENST00000405547 HES6Q96HZ4 224 aa13.76□□□□□ -0.21
SNED1-205ENST00000405547 ZDHHC15Q96MV8 337 aa13.76□□□□□ -0.21
SNED1-205ENST00000405547 TMEM237Q96Q45 408 aa13.76□□□□□ -0.21
SNED1-205ENST00000405547 POP1Q99575 1024 aaKnown RBP13.76□□□□□ -0.21
SNED1-205ENST00000405547 GPR63Q9BZJ6 419 aa13.76□□□□□ -0.21
SNED1-205ENST00000405547 EHD4Q9H223 541 aa13.76□□□□□ -0.21
SNED1-205ENST00000405547 VANGL2Q9ULK5 521 aa13.76□□□□□ -0.21
SNED1-205ENST00000405547 EIF3LQ9Y262 564 aaKnown RBP13.76□□□□□ -0.21
SNED1-205ENST00000405547 E9PBE3 544 aa13.76□□□□□ -0.21
SNED1-205ENST00000405547 DDX3XO00571 662 aaKnown RBP eCLIP13.76□□□□□ -0.21
SNED1-205ENST00000405547 KLHL41O60662 606 aa13.76□□□□□ -0.21
SNED1-205ENST00000405547 SERPINE1P05121 402 aa13.76□□□□□ -0.21
SNED1-205ENST00000405547 ELF3P78545 371 aaPredicted RBP13.76□□□□□ -0.21
SNED1-205ENST00000405547 TTMPQ5BVD1 217 aa13.76□□□□□ -0.21
SNED1-205ENST00000405547 AARS2Q5JTZ9 985 aaKnown RBP13.76□□□□□ -0.21
SNED1-205ENST00000405547 ANKS3Q6ZW76 656 aa13.76□□□□□ -0.21
SNED1-205ENST00000405547 TBC1D19Q8N5T2 526 aa13.76□□□□□ -0.21
SNED1-205ENST00000405547 SEPT8Q92599 483 aa13.76□□□□□ -0.21
SNED1-205ENST00000405547 ACOT9Q9Y305 439 aa13.76□□□□□ -0.21
SNED1-205ENST00000405547 C2orf81A6NN90 581 aa13.76□□□□□ -0.21
SNED1-205ENST00000405547 LZTS3O60299 673 aaPredicted RBP13.76□□□□□ -0.21
SNED1-205ENST00000405547 TADA2AO75478 443 aa13.76□□□□□ -0.21
SNED1-205ENST00000405547 MGAT5Q09328 741 aa13.76□□□□□ -0.21
SNED1-205ENST00000405547 PHF21AQ96BD5 680 aa13.76□□□□□ -0.21
SNED1-205ENST00000405547 MYLK2Q9H1R3 596 aa13.76□□□□□ -0.21
SNED1-205ENST00000405547 BTNL10A8MVZ5 291 aa13.76□□□□□ -0.21
SNED1-205ENST00000405547 PGK2P07205 417 aa13.76□□□□□ -0.21
SNED1-205ENST00000405547 PREPLQ4J6C6 727 aaPredicted RBP13.76□□□□□ -0.21
SNED1-205ENST00000405547 CCDC81Q6ZN84 652 aa13.76□□□□□ -0.21
SNED1-205ENST00000405547 DIS3LQ8TF46 1054 aaKnown RBP13.76□□□□□ -0.21
SNED1-205ENST00000405547 GTF3C2Q8WUA4 911 aaPredicted RBP13.76□□□□□ -0.21
SNED1-205ENST00000405547 PLEKHA8Q96JA3 519 aa13.76□□□□□ -0.21
SNED1-205ENST00000405547 BDH2Q9BUT1 245 aa13.76□□□□□ -0.21
SNED1-205ENST00000405547 CHST12Q9NRB3 414 aa13.76□□□□□ -0.21
SNED1-205ENST00000405547 SIK3Q9Y2K2 1263 aa13.76□□□□□ -0.21
SNED1-205ENST00000405547 FMN2Q9NZ56 1722 aa13.76□□□□□ -0.21
SNED1-205ENST00000405547 FCHO1O14526 889 aa13.76□□□□□ -0.21
SNED1-205ENST00000405547 AKT1P31749 480 aa13.76□□□□□ -0.21
SNED1-205ENST00000405547 PRKCIP41743 596 aa13.76□□□□□ -0.21
SNED1-205ENST00000405547 ILF2Q12905 390 aaKnown RBP13.76□□□□□ -0.21
SNED1-205ENST00000405547 PRKAA1Q13131 559 aa13.76□□□□□ -0.21
SNED1-205ENST00000405547 SNX17Q15036 470 aa13.76□□□□□ -0.21
SNED1-205ENST00000405547 FAM172AQ8WUF8 416 aa13.76□□□□□ -0.21
SNED1-205ENST00000405547 CKAP2Q8WWK9 683 aa13.76□□□□□ -0.21
SNED1-205ENST00000405547 MUC3BQ9H195 1237 aa13.76□□□□□ -0.21
SNED1-205ENST00000405547 DDX52Q9Y2R4 599 aaKnown RBP eCLIP13.76□□□□□ -0.21
SNED1-205ENST00000405547 MROH1Q8NDA8 1641 aa13.76□□□□□ -0.21
SNED1-205ENST00000405547 ARIH2O95376 493 aa13.76□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms