RNA–Protein interactions for RNA: ENST00000404484.8

TPM1-208, Transcript of tropomyosin 1, humanhuman

TSL 1 (best) BASIC

Gene TPM1, Length 1,568 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-208ENST00000404484 PBX3P40426 434 aa21.99■■□□□ 1.11
TPM1-208ENST00000404484 CAMK1Q14012 370 aa21.99■■□□□ 1.11
TPM1-208ENST00000404484 MRPL58Q14197 206 aaKnown RBP21.99■■□□□ 1.11
TPM1-208ENST00000404484 CTXN3Q4LDR2 81 aa21.99■■□□□ 1.11
TPM1-208ENST00000404484 RCOR2Q8IZ40 523 aa21.99■■□□□ 1.11
TPM1-208ENST00000404484 RUBCNQ92622 972 aa21.99■■□□□ 1.11
TPM1-208ENST00000404484 PIWIL1Q96J94 861 aaKnown RBP21.99■■□□□ 1.11
TPM1-208ENST00000404484 GPR62Q9BZJ7 368 aa21.99■■□□□ 1.11
TPM1-208ENST00000404484 COL4A4P53420 1690 aaPredicted RBP21.98■■□□□ 1.11
TPM1-208ENST00000404484 BRWD1Q9NSI6 2320 aa21.98■■□□□ 1.11
TPM1-208ENST00000404484 LAG3P18627 525 aa21.98■■□□□ 1.11
TPM1-208ENST00000404484 BDNFP23560 247 aa21.98■■□□□ 1.11
TPM1-208ENST00000404484 DNAJB1P25685 340 aa21.98■■□□□ 1.11
TPM1-208ENST00000404484 FLT3P36888 993 aa21.98■■□□□ 1.11
TPM1-208ENST00000404484 PTPN9P43378 593 aa21.98■■□□□ 1.11
TPM1-208ENST00000404484 COPS2P61201 443 aa21.98■■□□□ 1.11
TPM1-208ENST00000404484 MRPS5P82675 430 aaKnown RBP21.98■■□□□ 1.11
TPM1-208ENST00000404484 SMARCB1Q12824 385 aa21.98■■□□□ 1.11
TPM1-208ENST00000404484 RAB41Q5JT25 222 aa21.98■■□□□ 1.11
TPM1-208ENST00000404484 ZFYVE27Q5T4F4 411 aa21.98■■□□□ 1.11
TPM1-208ENST00000404484 KCNT2Q6UVM3 1135 aa21.98■■□□□ 1.11
TPM1-208ENST00000404484 ANKS3Q6ZW76 656 aa21.98■■□□□ 1.11
TPM1-208ENST00000404484 LRRTM3Q86VH5 581 aa21.98■■□□□ 1.11
TPM1-208ENST00000404484 CEP57Q86XR8 500 aa21.98■■□□□ 1.11
TPM1-208ENST00000404484 SLC13A5Q86YT5 568 aaPredicted RBP21.98■■□□□ 1.11
TPM1-208ENST00000404484 TMEM209Q96SK2 561 aa21.98■■□□□ 1.11
TPM1-208ENST00000404484 PRDM6Q9NQX0 595 aa21.98■■□□□ 1.11
TPM1-208ENST00000404484 TMLHEQ9NVH6 421 aa21.98■■□□□ 1.11
TPM1-208ENST00000404484 GRAP2O75791 330 aa21.97■■□□□ 1.11
TPM1-208ENST00000404484 RHOXF2BP0C7M4 288 aa21.97■■□□□ 1.11
TPM1-208ENST00000404484 GJC1P36383 396 aa21.97■■□□□ 1.11
TPM1-208ENST00000404484 TKTL1P51854 596 aa21.97■■□□□ 1.11
TPM1-208ENST00000404484 ADCY1Q08828 1119 aa21.97■■□□□ 1.11
TPM1-208ENST00000404484 SMC1AQ14683 1233 aaKnown RBP21.97■■□□□ 1.11
TPM1-208ENST00000404484 SLC39A12Q504Y0 691 aa21.97■■□□□ 1.11
TPM1-208ENST00000404484 DAB2IPQ5VWQ8 1189 aa21.97■■□□□ 1.11
TPM1-208ENST00000404484 C8orf74Q6P047 294 aa21.97■■□□□ 1.11
TPM1-208ENST00000404484 CCDC50Q8IVM0 306 aa21.97■■□□□ 1.11
TPM1-208ENST00000404484 ZMIZ2Q8NF64 920 aa21.97■■□□□ 1.11
TPM1-208ENST00000404484 ANKRD7Q92527 254 aa21.97■■□□□ 1.11
TPM1-208ENST00000404484 KHSRPQ92945 711 aaKnown RBP eCLIP21.97■■□□□ 1.114e-9■□□□□ 9.5
TPM1-208ENST00000404484 RHOXF2Q9BQY4 288 aa21.97■■□□□ 1.11
TPM1-208ENST00000404484 TTPALQ9BTX7 342 aa21.97■■□□□ 1.11
TPM1-208ENST00000404484 ARGLU1Q9NWB6 273 aaPredicted RBP21.97■■□□□ 1.11
TPM1-208ENST00000404484 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP21.97■■□□□ 1.11
TPM1-208ENST00000404484 DAB1O75553 588 aa21.96■■□□□ 1.11
TPM1-208ENST00000404484 FGF18O76093 207 aa21.96■■□□□ 1.11
TPM1-208ENST00000404484 KRT1P04264 644 aa21.96■■□□□ 1.11
TPM1-208ENST00000404484 SLC25A11Q02978 314 aaKnown RBP21.96■■□□□ 1.11
TPM1-208ENST00000404484 VSTM1Q6UX27 236 aa21.96■■□□□ 1.11
TPM1-208ENST00000404484 SCML4Q8N228 414 aa21.96■■□□□ 1.11
TPM1-208ENST00000404484 IRGQQ8WZA9 623 aa21.96■■□□□ 1.11
TPM1-208ENST00000404484 ZNF558Q96NG5 402 aa21.96■■□□□ 1.11
TPM1-208ENST00000404484 TRIM62Q9BVG3 475 aa21.96■■□□□ 1.11
TPM1-208ENST00000404484 AP1M1Q9BXS5 423 aa21.96■■□□□ 1.11
TPM1-208ENST00000404484 SLITRK6Q9H5Y7 841 aa21.96■■□□□ 1.11
TPM1-208ENST00000404484 PCDHB5Q9Y5E4 795 aa21.96■■□□□ 1.11
TPM1-208ENST00000404484 VCANP13611 3396 aa21.96■■□□□ 1.11
TPM1-208ENST00000404484 KIAA1671Q9BY89 1806 aa21.96■■□□□ 1.11
TPM1-208ENST00000404484 NT5C1B-RDH14C9J2C7 533 aa21.95■■□□□ 1.11
TPM1-208ENST00000404484 MIPP30301 263 aa21.95■■□□□ 1.11
TPM1-208ENST00000404484 TAF5Q15542 800 aa21.95■■□□□ 1.11
TPM1-208ENST00000404484 CCDC14Q49A88 953 aa21.95■■□□□ 1.11
TPM1-208ENST00000404484 CLEC4CQ8WTT0 213 aa21.95■■□□□ 1.11
TPM1-208ENST00000404484 POF1BQ8WVV4 589 aa21.95■■□□□ 1.11
TPM1-208ENST00000404484 FAM149B1Q96BN6 582 aa21.95■■□□□ 1.11
TPM1-208ENST00000404484 KCNK16Q96T55 309 aa21.95■■□□□ 1.11
TPM1-208ENST00000404484 KRT12Q99456 494 aa21.95■■□□□ 1.11
TPM1-208ENST00000404484 DDX23Q9BUQ8 820 aaKnown RBP21.95■■□□□ 1.11
TPM1-208ENST00000404484 LMAN2LQ9H0V9 348 aa21.95■■□□□ 1.11
TPM1-208ENST00000404484 ANKZF1Q9H8Y5 726 aa21.95■■□□□ 1.11
TPM1-208ENST00000404484 USP18Q9UMW8 372 aa21.95■■□□□ 1.11
TPM1-208ENST00000404484 VWA8A3KMH1 1905 aa21.95■■□□□ 1.1
TPM1-208ENST00000404484 PTPRDP23468 1912 aa21.95■■□□□ 1.1
TPM1-208ENST00000404484 HHLA1C9JL84 531 aa21.95■■□□□ 1.1
TPM1-208ENST00000404484 FSCN2O14926 492 aa21.95■■□□□ 1.1
TPM1-208ENST00000404484 PRPSAP2O60256 369 aa21.95■■□□□ 1.1
TPM1-208ENST00000404484 CSPG5O95196 566 aa21.95■■□□□ 1.1
TPM1-208ENST00000404484 PTPN7P35236 360 aa21.95■■□□□ 1.1
TPM1-208ENST00000404484 MATKP42679 507 aa21.95■■□□□ 1.1
TPM1-208ENST00000404484 MAGEA11P43364 429 aa21.95■■□□□ 1.1
TPM1-208ENST00000404484 CACNA2D1P54289 1103 aa21.95■■□□□ 1.1
TPM1-208ENST00000404484 DAOAP59103 153 aa21.95■■□□□ 1.1
TPM1-208ENST00000404484 YWHAZP63104 245 aaKnown RBP21.95■■□□□ 1.1
TPM1-208ENST00000404484 USP41Q3LFD5 358 aa21.95■■□□□ 1.1
TPM1-208ENST00000404484 TRNP1Q6NT89 227 aa21.95■■□□□ 1.1
TPM1-208ENST00000404484 C2orf15Q8WU43 125 aaKnown RBP21.95■■□□□ 1.1
TPM1-208ENST00000404484 IGSF21Q96ID5 467 aa21.95■■□□□ 1.1
TPM1-208ENST00000404484 RUNDC3BQ96NL0 473 aa21.95■■□□□ 1.1
TPM1-208ENST00000404484 ULBP1Q9BZM6 244 aa21.95■■□□□ 1.1
TPM1-208ENST00000404484 STAP1Q9ULZ2 295 aa21.95■■□□□ 1.1
TPM1-208ENST00000404484 TRIM66O15016 1216 aa21.94■■□□□ 1.1
TPM1-208ENST00000404484 ZBED1O96006 694 aa21.94■■□□□ 1.1
TPM1-208ENST00000404484 SKIV2LQ15477 1246 aaKnown RBP21.94■■□□□ 1.1
TPM1-208ENST00000404484 AADACL2Q6P093 401 aa21.94■■□□□ 1.1
TPM1-208ENST00000404484 STRADAQ7RTN6 431 aa21.94■■□□□ 1.1
TPM1-208ENST00000404484 ARFGAP1Q8N6T3 406 aa21.94■■□□□ 1.1
TPM1-208ENST00000404484 CCDC26Q8TAB7 109 aa21.94■■□□□ 1.1
TPM1-208ENST00000404484 FAM172AQ8WUF8 416 aa21.94■■□□□ 1.1
TPM1-208ENST00000404484 CFAP57Q96MR6 1250 aa21.94■■□□□ 1.1
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms