RNA–Protein interactions for RNA: ENST00000403971.2

HMGB3P19-201, Transcript of high mobility group box 3 pseudogene 19, humanhuman

BASIC

Gene HMGB3P19, Length 560 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P19-201ENST00000403971 TMEM41AQ96HV5 264 aa5.88□□□□□ -1.47
HMGB3P19-201ENST00000403971 ZBTB45Q96K62 511 aaPredicted RBP5.88□□□□□ -1.47
HMGB3P19-201ENST00000403971 STK33Q9BYT3 514 aa5.88□□□□□ -1.47
HMGB3P19-201ENST00000403971 ADGRA2Q96PE1 1338 aa5.88□□□□□ -1.47
HMGB3P19-201ENST00000403971 CNTLNQ9NXG0 1405 aa5.88□□□□□ -1.47
HMGB3P19-201ENST00000403971 NEURL4Q96JN8 1562 aa5.88□□□□□ -1.47
HMGB3P19-201ENST00000403971 PREX1Q8TCU6 1659 aa5.88□□□□□ -1.47
HMGB3P19-201ENST00000403971 ADM5C9JUS6 153 aa5.87□□□□□ -1.47
HMGB3P19-201ENST00000403971 AGPSO00116 658 aa5.87□□□□□ -1.47
HMGB3P19-201ENST00000403971 PODXLO00592 558 aa5.87□□□□□ -1.47
HMGB3P19-201ENST00000403971 YY2O15391 372 aa5.87□□□□□ -1.47
HMGB3P19-201ENST00000403971 CD3EAPO15446 510 aaKnown RBP5.87□□□□□ -1.47
HMGB3P19-201ENST00000403971 CHRM2P08172 466 aa5.87□□□□□ -1.47
HMGB3P19-201ENST00000403971 NTSR1P30989 418 aa5.87□□□□□ -1.47
HMGB3P19-201ENST00000403971 CLCN2P51788 898 aa5.87□□□□□ -1.47
HMGB3P19-201ENST00000403971 COPAP53621 1224 aa5.87□□□□□ -1.47
HMGB3P19-201ENST00000403971 MANEALQ5VSG8 457 aa5.87□□□□□ -1.47
HMGB3P19-201ENST00000403971 RAP1GAP2Q684P5 730 aa5.87□□□□□ -1.47
HMGB3P19-201ENST00000403971 ERAP2Q6P179 960 aa5.87□□□□□ -1.47
HMGB3P19-201ENST00000403971 FBXO38Q6PIJ6 1188 aa5.87□□□□□ -1.47
HMGB3P19-201ENST00000403971 KIAA0408Q6ZU52 694 aa5.87□□□□□ -1.47
HMGB3P19-201ENST00000403971 MYLK4Q86YV6 388 aaPredicted RBP5.87□□□□□ -1.47
HMGB3P19-201ENST00000403971 ABRAQ8N0Z2 381 aa5.87□□□□□ -1.47
HMGB3P19-201ENST00000403971 LCORLQ8N3X6 602 aa5.87□□□□□ -1.47
HMGB3P19-201ENST00000403971 MORC4Q8TE76 937 aa5.87□□□□□ -1.47
HMGB3P19-201ENST00000403971 SMCR8Q8TEV9 937 aaPredicted RBP5.87□□□□□ -1.47
HMGB3P19-201ENST00000403971 IPO4Q8TEX9 1081 aaKnown RBP5.87□□□□□ -1.47
HMGB3P19-201ENST00000403971 OSCP1Q8WVF1 389 aa5.87□□□□□ -1.47
HMGB3P19-201ENST00000403971 TFAP2BQ92481 460 aa5.87□□□□□ -1.47
HMGB3P19-201ENST00000403971 MUL1Q969V5 352 aa5.87□□□□□ -1.47
HMGB3P19-201ENST00000403971 FBXL20Q96IG2 436 aa5.87□□□□□ -1.47
HMGB3P19-201ENST00000403971 TRIM5Q9C035 493 aa5.87□□□□□ -1.47
HMGB3P19-201ENST00000403971 DDX24Q9GZR7 859 aaKnown RBP eCLIP5.87□□□□□ -1.47
HMGB3P19-201ENST00000403971 RGL1Q9NZL6 768 aa5.87□□□□□ -1.47
HMGB3P19-201ENST00000403971 MAGED2Q9UNF1 606 aaPredicted RBP5.87□□□□□ -1.47
HMGB3P19-201ENST00000403971 HPSEQ9Y251 543 aa5.87□□□□□ -1.47
HMGB3P19-201ENST00000403971 PTPRTO14522 1441 aa5.87□□□□□ -1.47
HMGB3P19-201ENST00000403971 TRPM2O94759 1503 aa5.87□□□□□ -1.47
HMGB3P19-201ENST00000403971 ADAMTSL3P82987 1691 aa5.87□□□□□ -1.47
HMGB3P19-201ENST00000403971 C3P01024 1663 aa5.86□□□□□ -1.47
HMGB3P19-201ENST00000403971 PIK3C2BO00750 1634 aa5.86□□□□□ -1.47
HMGB3P19-201ENST00000403971 NOS1P29475 1434 aa5.86□□□□□ -1.47
HMGB3P19-201ENST00000403971 NPATQ14207 1427 aa5.86□□□□□ -1.47
HMGB3P19-201ENST00000403971 AQP7P3A6NL99 342 aa5.86□□□□□ -1.47
HMGB3P19-201ENST00000403971 BTBD11A6QL63 1104 aa5.86□□□□□ -1.47
HMGB3P19-201ENST00000403971 PROM1O43490 865 aa5.86□□□□□ -1.47
HMGB3P19-201ENST00000403971 KCNQ3O43525 872 aa5.86□□□□□ -1.47
HMGB3P19-201ENST00000403971 LMNAP02545 664 aaKnown RBP5.86□□□□□ -1.47
HMGB3P19-201ENST00000403971 TNFRSF1AP19438 455 aa5.86□□□□□ -1.47
HMGB3P19-201ENST00000403971 MAKP20794 623 aa5.86□□□□□ -1.47
HMGB3P19-201ENST00000403971 UQCRC1P31930 480 aa5.86□□□□□ -1.47
HMGB3P19-201ENST00000403971 LIPAP38571 399 aa5.86□□□□□ -1.47
HMGB3P19-201ENST00000403971 ALDH9A1P49189 494 aa5.86□□□□□ -1.47
HMGB3P19-201ENST00000403971 ITIH3Q06033 890 aa5.86□□□□□ -1.47
HMGB3P19-201ENST00000403971 RAB30Q15771 203 aa5.86□□□□□ -1.47
HMGB3P19-201ENST00000403971 TBCCQ15814 346 aa5.86□□□□□ -1.47
HMGB3P19-201ENST00000403971 GRAMD1BQ3KR37 738 aa5.86□□□□□ -1.47
HMGB3P19-201ENST00000403971 ARHGAP15Q53QZ3 475 aa5.86□□□□□ -1.47
HMGB3P19-201ENST00000403971 CERCAMQ5T4B2 595 aa5.86□□□□□ -1.47
HMGB3P19-201ENST00000403971 SLC9A4Q6AI14 798 aa5.86□□□□□ -1.47
HMGB3P19-201ENST00000403971 CCDC174Q6PII3 467 aa5.86□□□□□ -1.47
HMGB3P19-201ENST00000403971 ZNF627Q7L945 461 aa5.86□□□□□ -1.47
HMGB3P19-201ENST00000403971 CCDC28AQ8IWP9 274 aa5.86□□□□□ -1.47
HMGB3P19-201ENST00000403971 LARP4BQ92615 738 aaKnown RBP5.86□□□□□ -1.47
HMGB3P19-201ENST00000403971 GLG1Q92896 1179 aa5.86□□□□□ -1.47
HMGB3P19-201ENST00000403971 FKBP10Q96AY3 582 aa5.86□□□□□ -1.47
HMGB3P19-201ENST00000403971 SNX27Q96L92 541 aa5.86□□□□□ -1.47
HMGB3P19-201ENST00000403971 C17orf80Q9BSJ5 609 aa5.86□□□□□ -1.47
HMGB3P19-201ENST00000403971 SELENOOQ9BVL4 669 aa5.86□□□□□ -1.47
HMGB3P19-201ENST00000403971 PCDHAC1Q9H158 963 aa5.86□□□□□ -1.47
HMGB3P19-201ENST00000403971 IGSF9Q9P2J2 1179 aa5.86□□□□□ -1.47
HMGB3P19-201ENST00000403971 ZMYND8Q9ULU4 1186 aaPredicted RBP5.86□□□□□ -1.47
HMGB3P19-201ENST00000403971 RIPOR2Q9Y4F9 1068 aa5.86□□□□□ -1.47
HMGB3P19-201ENST00000403971 KDM5AP29375 1690 aaKnown RBP5.85□□□□□ -1.47
HMGB3P19-201ENST00000403971 COL4A3Q01955 1670 aa5.85□□□□□ -1.47
HMGB3P19-201ENST00000403971 SPATA31D1Q6ZQQ2 1576 aa5.85□□□□□ -1.47
HMGB3P19-201ENST00000403971 PLA2R1Q13018 1463 aa5.85□□□□□ -1.47
HMGB3P19-201ENST00000403971 SALL3Q9BXA9 1300 aa5.85□□□□□ -1.47
HMGB3P19-201ENST00000403971 AQP12BA6NM10 295 aa5.85□□□□□ -1.47
HMGB3P19-201ENST00000403971 ZAR1LA6NP61 321 aa5.85□□□□□ -1.47
HMGB3P19-201ENST00000403971 IFRD1O00458 451 aaPredicted RBP5.85□□□□□ -1.47
HMGB3P19-201ENST00000403971 PEX1O43933 1283 aa5.85□□□□□ -1.47
HMGB3P19-201ENST00000403971 TCEA3O75764 348 aa5.85□□□□□ -1.47
HMGB3P19-201ENST00000403971 PECAM1P16284 738 aaPredicted RBP5.85□□□□□ -1.47
HMGB3P19-201ENST00000403971 YY1P25490 414 aa5.85□□□□□ -1.47
HMGB3P19-201ENST00000403971 PGDP52209 483 aa5.85□□□□□ -1.47
HMGB3P19-201ENST00000403971 ATXN1P54253 815 aaKnown RBP5.85□□□□□ -1.47
HMGB3P19-201ENST00000403971 BCAT1P54687 386 aa5.85□□□□□ -1.47
HMGB3P19-201ENST00000403971 NXPH1P58417 271 aa5.85□□□□□ -1.47
HMGB3P19-201ENST00000403971 GRM1Q13255 1194 aa5.85□□□□□ -1.47
HMGB3P19-201ENST00000403971 CCNIQ14094 377 aa5.85□□□□□ -1.47
HMGB3P19-201ENST00000403971 ELF2Q15723 593 aa5.85□□□□□ -1.47
HMGB3P19-201ENST00000403971 CRIP3Q6Q6R5 217 aa5.85□□□□□ -1.47
HMGB3P19-201ENST00000403971 Q6YL49 198 aa5.85□□□□□ -1.47
HMGB3P19-201ENST00000403971 Q6ZNX1 250 aa5.85□□□□□ -1.47
HMGB3P19-201ENST00000403971 DTX2Q86UW9 622 aa5.85□□□□□ -1.47
HMGB3P19-201ENST00000403971 IZUMO1Q8IYV9 350 aa5.85□□□□□ -1.47
HMGB3P19-201ENST00000403971 Q8N1X5 172 aa5.85□□□□□ -1.47
HMGB3P19-201ENST00000403971 ZNF527Q8NB42 609 aa5.85□□□□□ -1.47
HMGB3P19-201ENST00000403971 CYP2W1Q8TAV3 490 aa5.85□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms