RNA–Protein interactions for RNA: ENST00000400772.6

ATG4B-203, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 4

Gene ATG4B, Length 625 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-203ENST00000400772 POLR3BQ9NW08 1133 aaPredicted RBP16.74■□□□□ 0.27
ATG4B-203ENST00000400772 USP3Q9Y6I4 520 aa16.74■□□□□ 0.27
ATG4B-203ENST00000400772 E2F8A0AVK6 867 aa16.73■□□□□ 0.27
ATG4B-203ENST00000400772 BICDL2A1A5D9 508 aa16.73■□□□□ 0.27
ATG4B-203ENST00000400772 CHURC1-FNTBB4DL54 471 aa16.73■□□□□ 0.27
ATG4B-203ENST00000400772 SLC9A3R1O14745 358 aaPredicted RBP16.73■□□□□ 0.27
ATG4B-203ENST00000400772 GREM1O60565 184 aa16.73■□□□□ 0.27
ATG4B-203ENST00000400772 TLR5O60602 858 aa16.73■□□□□ 0.27
ATG4B-203ENST00000400772 RNF40O75150 1001 aa16.73■□□□□ 0.27
ATG4B-203ENST00000400772 HOXA6P31267 233 aa16.73■□□□□ 0.27
ATG4B-203ENST00000400772 FNTBP49356 437 aa16.73■□□□□ 0.27
ATG4B-203ENST00000400772 LRMPQ12912 555 aa16.73■□□□□ 0.27
ATG4B-203ENST00000400772 CAMK4Q16566 473 aa16.73■□□□□ 0.27
ATG4B-203ENST00000400772 CCDC40Q4G0X9 1142 aa16.73■□□□□ 0.27
ATG4B-203ENST00000400772 SCD5Q86SK9 330 aa16.73■□□□□ 0.27
ATG4B-203ENST00000400772 DCLK2Q8N568 766 aa16.73■□□□□ 0.27
ATG4B-203ENST00000400772 LMO3Q8TAP4 145 aa16.73■□□□□ 0.27
ATG4B-203ENST00000400772 KLF16Q9BXK1 252 aaPredicted RBP16.73■□□□□ 0.27
ATG4B-203ENST00000400772 CYLDQ9NQC7 956 aa16.73■□□□□ 0.27
ATG4B-203ENST00000400772 KIAA1468Q9P260 1216 aa16.73■□□□□ 0.27
ATG4B-203ENST00000400772 GPR179Q6PRD1 2367 aa16.72■□□□□ 0.27
ATG4B-203ENST00000400772 A0A1W2PQH9 124 aa16.72■□□□□ 0.27
ATG4B-203ENST00000400772 ANTXRLA6NF34 631 aa16.72■□□□□ 0.27
ATG4B-203ENST00000400772 HRO43593 1189 aa16.72■□□□□ 0.27
ATG4B-203ENST00000400772 SLC6A11P48066 632 aa16.72■□□□□ 0.27
ATG4B-203ENST00000400772 PAK1Q13153 545 aa16.72■□□□□ 0.27
ATG4B-203ENST00000400772 FBXO43Q4G163 708 aa16.72■□□□□ 0.27
ATG4B-203ENST00000400772 TTC30AQ86WT1 665 aa16.72■□□□□ 0.27
ATG4B-203ENST00000400772 ANKRD52Q8NB46 1076 aa16.72■□□□□ 0.27
ATG4B-203ENST00000400772 UBXN6Q9BZV1 441 aa16.72■□□□□ 0.27
ATG4B-203ENST00000400772 DNAI2Q9GZS0 605 aa16.72■□□□□ 0.27
ATG4B-203ENST00000400772 MTPAPQ9NVV4 582 aaKnown RBP eCLIP16.72■□□□□ 0.27
ATG4B-203ENST00000400772 TBC1D14Q9P2M4 693 aa16.72■□□□□ 0.27
ATG4B-203ENST00000400772 OTOGLQ3ZCN5 2332 aa16.71■□□□□ 0.27
ATG4B-203ENST00000400772 MYOFQ9NZM1 2061 aa16.71■□□□□ 0.27
ATG4B-203ENST00000400772 K7EQS6 105 aa16.71■□□□□ 0.27
ATG4B-203ENST00000400772 ATG13O75143 517 aa16.71■□□□□ 0.27
ATG4B-203ENST00000400772 MARSP56192 900 aaKnown RBP16.71■□□□□ 0.27
ATG4B-203ENST00000400772 MESP2Q0VG99 397 aa16.71■□□□□ 0.27
ATG4B-203ENST00000400772 SRSF5Q13243 272 aaKnown RBP16.71■□□□□ 0.27
ATG4B-203ENST00000400772 RAB41Q5JT25 222 aa16.71■□□□□ 0.27
ATG4B-203ENST00000400772 HEATR6Q6AI08 1181 aaKnown RBP16.71■□□□□ 0.27
ATG4B-203ENST00000400772 CCDC186Q7Z3E2 898 aa16.71■□□□□ 0.27
ATG4B-203ENST00000400772 PIGZQ86VD9 579 aa16.71■□□□□ 0.27
ATG4B-203ENST00000400772 LONP2Q86WA8 852 aa16.71■□□□□ 0.27
ATG4B-203ENST00000400772 C12orf40Q86WS4 652 aa16.71■□□□□ 0.27
ATG4B-203ENST00000400772 TRIM59Q8IWR1 403 aa16.71■□□□□ 0.27
ATG4B-203ENST00000400772 BBS7Q8IWZ6 715 aa16.71■□□□□ 0.27
ATG4B-203ENST00000400772 TRIML1Q8N9V2 468 aa16.71■□□□□ 0.27
ATG4B-203ENST00000400772 RUBCNQ92622 972 aa16.71■□□□□ 0.27
ATG4B-203ENST00000400772 KAT5Q92993 513 aa16.71■□□□□ 0.27
ATG4B-203ENST00000400772 EXOC4Q96A65 974 aa16.71■□□□□ 0.27
ATG4B-203ENST00000400772 MED15Q96RN5 788 aa16.71■□□□□ 0.27
ATG4B-203ENST00000400772 SRRTQ9BXP5 876 aaKnown RBP16.71■□□□□ 0.27
ATG4B-203ENST00000400772 NUDT5Q9UKK9 219 aa16.71■□□□□ 0.27
ATG4B-203ENST00000400772 SMG5Q9UPR3 1016 aaKnown RBP16.71■□□□□ 0.27
ATG4B-203ENST00000400772 SH3BP1Q9Y3L3 701 aa16.71■□□□□ 0.27
ATG4B-203ENST00000400772 EP300Q09472 2414 aaPredicted RBP16.71■□□□□ 0.27
ATG4B-203ENST00000400772 TULP2O00295 520 aa16.7■□□□□ 0.26
ATG4B-203ENST00000400772 MDM4O15151 490 aa16.7■□□□□ 0.26
ATG4B-203ENST00000400772 IRF1P10914 325 aa16.7■□□□□ 0.26
ATG4B-203ENST00000400772 RARGP13631 454 aa16.7■□□□□ 0.26
ATG4B-203ENST00000400772 ATP5C1P36542 298 aaKnown RBP16.7■□□□□ 0.26
ATG4B-203ENST00000400772 KCNH2Q12809 1159 aa16.7■□□□□ 0.26
ATG4B-203ENST00000400772 LY6G5CQ5SRR4 150 aa16.7■□□□□ 0.26
ATG4B-203ENST00000400772 KLHDC10Q6PID8 442 aa16.7■□□□□ 0.26
ATG4B-203ENST00000400772 HTR3DQ70Z44 454 aa16.7■□□□□ 0.26
ATG4B-203ENST00000400772 WDR5BQ86VZ2 330 aa16.7■□□□□ 0.26
ATG4B-203ENST00000400772 SFTPA1Q8IWL2 248 aa16.7■□□□□ 0.26
ATG4B-203ENST00000400772 ZNF276Q8N554 614 aa16.7■□□□□ 0.26
ATG4B-203ENST00000400772 RPLP0P6Q8NHW5 317 aa16.7■□□□□ 0.26
ATG4B-203ENST00000400772 OTUB2Q96DC9 234 aa16.7■□□□□ 0.26
ATG4B-203ENST00000400772 NACA2Q9H009 215 aa16.7■□□□□ 0.26
ATG4B-203ENST00000400772 MYO16Q9Y6X6 1858 aa16.69■□□□□ 0.26
ATG4B-203ENST00000400772 A0A0A0MRY4 1105 aa16.69■□□□□ 0.26
ATG4B-203ENST00000400772 RNF225M0QZC1 329 aaPredicted RBP16.69■□□□□ 0.26
ATG4B-203ENST00000400772 P4HA2O15460 535 aa16.69■□□□□ 0.26
ATG4B-203ENST00000400772 GNA14O95837 355 aa16.69■□□□□ 0.26
ATG4B-203ENST00000400772 CHRM1P11229 460 aaPredicted RBP16.69■□□□□ 0.26
ATG4B-203ENST00000400772 TBXAS1P24557 533 aaPredicted RBP16.69■□□□□ 0.26
ATG4B-203ENST00000400772 PXNP49023 591 aaPredicted RBP16.69■□□□□ 0.26
ATG4B-203ENST00000400772 YWHAEP62258 255 aaKnown RBP16.69■□□□□ 0.26
ATG4B-203ENST00000400772 GOLGA7BQ2TAP0 167 aa16.69■□□□□ 0.26
ATG4B-203ENST00000400772 EHBP1Q8NDI1 1231 aa16.69■□□□□ 0.26
ATG4B-203ENST00000400772 TFAP2BQ92481 460 aa16.69■□□□□ 0.26
ATG4B-203ENST00000400772 NT5C1BQ96P26 610 aa16.69■□□□□ 0.26
ATG4B-203ENST00000400772 NAGPAQ9UK23 515 aa16.69■□□□□ 0.26
ATG4B-203ENST00000400772 TSPAN16Q9UKR8 245 aa16.69■□□□□ 0.26
ATG4B-203ENST00000400772 SLC8A2Q9UPR5 921 aa16.69■□□□□ 0.26
ATG4B-203ENST00000400772 GVINP1Q7Z2Y8 2422 aa16.68■□□□□ 0.26
ATG4B-203ENST00000400772 ADH1CP00326 375 aa16.68■□□□□ 0.26
ATG4B-203ENST00000400772 VDRP11473 427 aa16.68■□□□□ 0.26
ATG4B-203ENST00000400772 ADH5P11766 374 aa16.68■□□□□ 0.26
ATG4B-203ENST00000400772 CNR2P34972 360 aa16.68■□□□□ 0.26
ATG4B-203ENST00000400772 EIF2DP41214 584 aaKnown RBP16.68■□□□□ 0.26
ATG4B-203ENST00000400772 GAD2Q05329 585 aa16.68■□□□□ 0.26
ATG4B-203ENST00000400772 PDE4CQ08493 712 aa16.68■□□□□ 0.26
ATG4B-203ENST00000400772 PKDCCQ504Y2 493 aa16.68■□□□□ 0.26
ATG4B-203ENST00000400772 SGO2Q562F6 1265 aa16.68■□□□□ 0.26
ATG4B-203ENST00000400772 PM20D1Q6GTS8 502 aa16.68■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 43.9 ms