RNA–Protein interactions for RNA: ENST00000400771.7

ATG4B-202, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 5

Gene ATG4B, Length 663 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-202ENST00000400771 CCDC186Q7Z3E2 898 aa16.3■□□□□ 0.2
ATG4B-202ENST00000400771 SCD5Q86SK9 330 aa16.3■□□□□ 0.2
ATG4B-202ENST00000400771 TTC16Q8NEE8 873 aa16.3■□□□□ 0.2
ATG4B-202ENST00000400771 TFAP2BQ92481 460 aa16.3■□□□□ 0.2
ATG4B-202ENST00000400771 ATP2A3Q93084 1043 aa16.3■□□□□ 0.2
ATG4B-202ENST00000400771 HEXIM2Q96MH2 286 aaKnown RBP16.3■□□□□ 0.2
ATG4B-202ENST00000400771 FBXO44Q9H4M3 255 aa16.3■□□□□ 0.2
ATG4B-202ENST00000400771 FBRSL1Q9HCM7 1045 aaKnown RBP16.3■□□□□ 0.2
ATG4B-202ENST00000400771 CFAP97Q9P2B7 532 aa16.3■□□□□ 0.2
ATG4B-202ENST00000400771 TSPAN16Q9UKR8 245 aa16.3■□□□□ 0.2
ATG4B-202ENST00000400771 FBXO4Q9UKT5 387 aa16.3■□□□□ 0.2
ATG4B-202ENST00000400771 R4GN57 208 aa16.3■□□□□ 0.2
ATG4B-202ENST00000400771 DMXL1Q9Y485 3027 aa16.3■□□□□ 0.2
ATG4B-202ENST00000400771 PLXND1Q9Y4D7 1925 aa16.29■□□□□ 0.2
ATG4B-202ENST00000400771 A0A1W2PQH9 124 aa16.29■□□□□ 0.2
ATG4B-202ENST00000400771 RNF225M0QZC1 329 aaPredicted RBP16.29■□□□□ 0.2
ATG4B-202ENST00000400771 LAMTOR5O43504 91 aa16.29■□□□□ 0.2
ATG4B-202ENST00000400771 TLR5O60602 858 aa16.29■□□□□ 0.2
ATG4B-202ENST00000400771 CHRM1P11229 460 aaPredicted RBP16.29■□□□□ 0.2
ATG4B-202ENST00000400771 TRIM21P19474 475 aaKnown RBP16.29■□□□□ 0.2
ATG4B-202ENST00000400771 OPRD1P41143 372 aa16.29■□□□□ 0.2
ATG4B-202ENST00000400771 GCNT1Q02742 428 aa16.29■□□□□ 0.2
ATG4B-202ENST00000400771 ZNF528Q3MIS6 628 aa16.29■□□□□ 0.2
ATG4B-202ENST00000400771 TSSK4Q6SA08 328 aa16.29■□□□□ 0.2
ATG4B-202ENST00000400771 RBM43Q6ZSC3 357 aaKnown RBP16.29■□□□□ 0.2
ATG4B-202ENST00000400771 PIGZQ86VD9 579 aa16.29■□□□□ 0.2
ATG4B-202ENST00000400771 PPM1KQ8N3J5 372 aa16.29■□□□□ 0.2
ATG4B-202ENST00000400771 CPA6Q8N4T0 437 aa16.29■□□□□ 0.2
ATG4B-202ENST00000400771 MLKLQ8NB16 471 aa16.29■□□□□ 0.2
ATG4B-202ENST00000400771 INTS2Q9H0H0 1204 aaKnown RBP16.29■□□□□ 0.2
ATG4B-202ENST00000400771 UTP18Q9Y5J1 556 aaKnown RBP eCLIP16.29■□□□□ 0.2
ATG4B-202ENST00000400771 PTPRZ1P23471 2315 aaPredicted RBP16.28■□□□□ 0.2
ATG4B-202ENST00000400771 PAPSS2O95340 614 aaPredicted RBP16.28■□□□□ 0.2
ATG4B-202ENST00000400771 TBX18O95935 607 aa16.28■□□□□ 0.2
ATG4B-202ENST00000400771 CALCAP01258 141 aa16.28■□□□□ 0.2
ATG4B-202ENST00000400771 CCDC192P0DO97 292 aa16.28■□□□□ 0.2
ATG4B-202ENST00000400771 HOXC13P31276 330 aa16.28■□□□□ 0.2
ATG4B-202ENST00000400771 BCAT1P54687 386 aa16.28■□□□□ 0.2
ATG4B-202ENST00000400771 YWHAEP62258 255 aaKnown RBP16.28■□□□□ 0.2
ATG4B-202ENST00000400771 SATB1Q01826 763 aa16.28■□□□□ 0.2
ATG4B-202ENST00000400771 LRRC32Q14392 662 aa16.28■□□□□ 0.2
ATG4B-202ENST00000400771 DGKKQ5KSL6 1271 aa16.28■□□□□ 0.2
ATG4B-202ENST00000400771 ANKRD52Q8NB46 1076 aa16.28■□□□□ 0.2
ATG4B-202ENST00000400771 EHBP1Q8NDI1 1231 aa16.28■□□□□ 0.2
ATG4B-202ENST00000400771 TLR8Q9NR97 1041 aaKnown RBP16.28■□□□□ 0.2
ATG4B-202ENST00000400771 MTPAPQ9NVV4 582 aaKnown RBP eCLIP16.28■□□□□ 0.2
ATG4B-202ENST00000400771 CNTN6Q9UQ52 1028 aa16.28■□□□□ 0.2
ATG4B-202ENST00000400771 MUC22E2RYF6 1773 aaPredicted RBP16.28■□□□□ 0.2
ATG4B-202ENST00000400771 CEP250Q9BV73 2442 aa16.27■□□□□ 0.2
ATG4B-202ENST00000400771 K7ESF4 209 aa16.27■□□□□ 0.2
ATG4B-202ENST00000400771 XPO1O14980 1071 aaKnown RBP16.27■□□□□ 0.2
ATG4B-202ENST00000400771 MDM4O15151 490 aa16.27■□□□□ 0.2
ATG4B-202ENST00000400771 GABBR2O75899 941 aa16.27■□□□□ 0.2
ATG4B-202ENST00000400771 NFATC1O95644 943 aa16.27■□□□□ 0.2
ATG4B-202ENST00000400771 EGFP01133 1207 aa16.27■□□□□ 0.2
ATG4B-202ENST00000400771 PAEPP09466 180 aa16.27■□□□□ 0.2
ATG4B-202ENST00000400771 APBA1Q02410 837 aa16.27■□□□□ 0.2
ATG4B-202ENST00000400771 PDE4CQ08493 712 aa16.27■□□□□ 0.2
ATG4B-202ENST00000400771 MESP2Q0VG99 397 aa16.27■□□□□ 0.2
ATG4B-202ENST00000400771 BST2Q10589 180 aaKnown RBP16.27■□□□□ 0.2
ATG4B-202ENST00000400771 SGO2Q562F6 1265 aa16.27■□□□□ 0.2
ATG4B-202ENST00000400771 TMEM270Q6UE05 265 aa16.27■□□□□ 0.2
ATG4B-202ENST00000400771 RRAGAQ7L523 313 aa16.27■□□□□ 0.2
ATG4B-202ENST00000400771 C12orf40Q86WS4 652 aa16.27■□□□□ 0.2
ATG4B-202ENST00000400771 DDX42Q86XP3 938 aaKnown RBP eCLIP16.27■□□□□ 0.2
ATG4B-202ENST00000400771 SPEM1Q8N4L4 309 aa16.27■□□□□ 0.2
ATG4B-202ENST00000400771 RBBP8NLQ8NC74 664 aaPredicted RBP16.27■□□□□ 0.2
ATG4B-202ENST00000400771 ZBTB44Q8NCP5 570 aa16.27■□□□□ 0.2
ATG4B-202ENST00000400771 IPO9Q96P70 1041 aaKnown RBP16.27■□□□□ 0.2
ATG4B-202ENST00000400771 KLF16Q9BXK1 252 aaPredicted RBP16.27■□□□□ 0.2
ATG4B-202ENST00000400771 UBXN6Q9BZV1 441 aa16.27■□□□□ 0.2
ATG4B-202ENST00000400771 E2F8A0AVK6 867 aa16.26■□□□□ 0.19
ATG4B-202ENST00000400771 ANTXRLA6NF34 631 aa16.26■□□□□ 0.19
ATG4B-202ENST00000400771 GFRA3O60609 400 aa16.26■□□□□ 0.19
ATG4B-202ENST00000400771 LILRB5O75023 590 aa16.26■□□□□ 0.19
ATG4B-202ENST00000400771 VDRP11473 427 aa16.26■□□□□ 0.19
ATG4B-202ENST00000400771 CD19P15391 556 aa16.26■□□□□ 0.19
ATG4B-202ENST00000400771 BRD2P25440 801 aaKnown RBP16.26■□□□□ 0.19
ATG4B-202ENST00000400771 PLA2G4AP47712 749 aa16.26■□□□□ 0.19
ATG4B-202ENST00000400771 CSTF1Q05048 431 aaKnown RBP16.26■□□□□ 0.19
ATG4B-202ENST00000400771 KLHDC10Q6PID8 442 aa16.26■□□□□ 0.19
ATG4B-202ENST00000400771 TRIM65Q6PJ69 517 aa16.26■□□□□ 0.19
ATG4B-202ENST00000400771 BBS7Q8IWZ6 715 aa16.26■□□□□ 0.19
ATG4B-202ENST00000400771 ZNF276Q8N554 614 aa16.26■□□□□ 0.19
ATG4B-202ENST00000400771 P2RY13Q9BPV8 354 aa16.26■□□□□ 0.19
ATG4B-202ENST00000400771 SIX2Q9NPC8 291 aa16.26■□□□□ 0.19
ATG4B-202ENST00000400771 AJAP1Q9UKB5 411 aaPredicted RBP16.26■□□□□ 0.19
ATG4B-202ENST00000400771 NUDT5Q9UKK9 219 aa16.26■□□□□ 0.19
ATG4B-202ENST00000400771 WDR3Q9UNX4 943 aaKnown RBP eCLIP16.26■□□□□ 0.19
ATG4B-202ENST00000400771 NYNRINQ9P2P1 1898 aaKnown RBP16.26■□□□□ 0.19
ATG4B-202ENST00000400771 TNRC6BQ9UPQ9 1833 aaKnown RBP16.26■□□□□ 0.19
ATG4B-202ENST00000400771 RALGAPA1Q6GYQ0 2036 aa16.26■□□□□ 0.19
ATG4B-202ENST00000400771 FGFR1OPO95684 399 aaKnown RBP16.25■□□□□ 0.19
ATG4B-202ENST00000400771 IRF1P10914 325 aa16.25■□□□□ 0.19
ATG4B-202ENST00000400771 RARGP13631 454 aa16.25■□□□□ 0.19
ATG4B-202ENST00000400771 ERCC5P28715 1186 aaPredicted RBP16.25■□□□□ 0.19
ATG4B-202ENST00000400771 GALK1P51570 392 aa16.25■□□□□ 0.19
ATG4B-202ENST00000400771 CCR3P51677 355 aa16.25■□□□□ 0.19
ATG4B-202ENST00000400771 DMWDQ09019 674 aa16.25■□□□□ 0.19
ATG4B-202ENST00000400771 DHCR24Q15392 516 aa16.25■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms