RNA–Protein interactions for RNA: ENST00000400259.5

CDC42-203, Transcript of cell division cycle 42, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene CDC42, Length 2,274 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42-203ENST00000400259 RNF19AQ9NV58 838 aa16.41■□□□□ 0.22
CDC42-203ENST00000400259 GTF2IRD1Q9UHL9 959 aa16.41■□□□□ 0.22
CDC42-203ENST00000400259 SLC24A2Q9UI40 661 aa16.41■□□□□ 0.22
CDC42-203ENST00000400259 TSC2P49815 1807 aa16.41■□□□□ 0.22
CDC42-203ENST00000400259 CLUHO75153 1309 aa16.41■□□□□ 0.22
CDC42-203ENST00000400259 CFAP69A5D8W1 941 aa16.4■□□□□ 0.22
CDC42-203ENST00000400259 DUSP11O75319 330 aaKnown RBP16.4■□□□□ 0.22
CDC42-203ENST00000400259 LILRA4P59901 499 aa16.4■□□□□ 0.22
CDC42-203ENST00000400259 DARS2Q6PI48 645 aaKnown RBP16.4■□□□□ 0.22
CDC42-203ENST00000400259 PIGWQ7Z7B1 504 aa16.4■□□□□ 0.22
CDC42-203ENST00000400259 ADGRF2Q8IZF7 708 aa16.4■□□□□ 0.22
CDC42-203ENST00000400259 TRAF3IP1Q8TDR0 691 aaPredicted RBP16.4■□□□□ 0.22
CDC42-203ENST00000400259 APOL1O14791 398 aa16.4■□□□□ 0.22
CDC42-203ENST00000400259 HUS1O60921 280 aa16.4■□□□□ 0.22
CDC42-203ENST00000400259 TMEM63AO94886 807 aa16.4■□□□□ 0.22
CDC42-203ENST00000400259 PDGFRBP09619 1106 aa16.4■□□□□ 0.22
CDC42-203ENST00000400259 INHBEP58166 350 aa16.4■□□□□ 0.22
CDC42-203ENST00000400259 GPX6P59796 221 aa16.4■□□□□ 0.22
CDC42-203ENST00000400259 DPYSL2Q16555 572 aa16.4■□□□□ 0.22
CDC42-203ENST00000400259 ZC3H12AQ5D1E8 599 aaKnown RBP16.4■□□□□ 0.22
CDC42-203ENST00000400259 EFHC2Q5JST6 749 aa16.4■□□□□ 0.22
CDC42-203ENST00000400259 ZNF618Q5T7W0 954 aa16.4■□□□□ 0.22
CDC42-203ENST00000400259 SCYL2Q6P3W7 929 aa16.4■□□□□ 0.22
CDC42-203ENST00000400259 TRABD2AQ86V40 505 aa16.4■□□□□ 0.22
CDC42-203ENST00000400259 CCDC13Q8IYE1 715 aa16.4■□□□□ 0.22
CDC42-203ENST00000400259 LRRC34Q8IZ02 419 aa16.4■□□□□ 0.22
CDC42-203ENST00000400259 MICALL1Q8N3F8 863 aa16.4■□□□□ 0.22
CDC42-203ENST00000400259 OTUD6BQ8N6M0 293 aa16.4■□□□□ 0.22
CDC42-203ENST00000400259 ATP11CQ8NB49 1132 aa16.4■□□□□ 0.22
CDC42-203ENST00000400259 PPP1R10Q96QC0 940 aaKnown RBP16.4■□□□□ 0.22
CDC42-203ENST00000400259 VPS37BQ9H9H4 285 aa16.4■□□□□ 0.22
CDC42-203ENST00000400259 USP29Q9HBJ7 922 aa16.4■□□□□ 0.22
CDC42-203ENST00000400259 GOLGA2P5Q9HBQ8 144 aa16.4■□□□□ 0.22
CDC42-203ENST00000400259 BCLAF3A2AJT9 711 aaKnown RBP16.39■□□□□ 0.21
CDC42-203ENST00000400259 FOXO6A8MYZ6 492 aa16.39■□□□□ 0.21
CDC42-203ENST00000400259 PTGESO14684 152 aa16.39■□□□□ 0.21
CDC42-203ENST00000400259 XPO1O14980 1071 aaKnown RBP16.39■□□□□ 0.21
CDC42-203ENST00000400259 ADORA2BP29275 332 aa16.39■□□□□ 0.21
CDC42-203ENST00000400259 SLC18A1P54219 525 aa16.39■□□□□ 0.21
CDC42-203ENST00000400259 MRPS6P82932 125 aaKnown RBP16.39■□□□□ 0.21
CDC42-203ENST00000400259 GAD2Q05329 585 aa16.39■□□□□ 0.21
CDC42-203ENST00000400259 MPP2Q14168 576 aa16.39■□□□□ 0.21
CDC42-203ENST00000400259 FNBP1LQ5T0N5 605 aa16.39■□□□□ 0.21
CDC42-203ENST00000400259 PCDH19Q8TAB3 1148 aa16.39■□□□□ 0.21
CDC42-203ENST00000400259 PPM1EQ8WY54 764 aa16.39■□□□□ 0.21
CDC42-203ENST00000400259 CABS1Q96KC9 395 aa16.39■□□□□ 0.21
CDC42-203ENST00000400259 HNRNPABQ99729 332 aaKnown RBP16.39■□□□□ 0.21
CDC42-203ENST00000400259 NSRP1Q9H0G5 558 aaKnown RBP16.39■□□□□ 0.21
CDC42-203ENST00000400259 SENP1Q9P0U3 644 aa16.39■□□□□ 0.21
CDC42-203ENST00000400259 TBK1Q9UHD2 729 aa16.39■□□□□ 0.21
CDC42-203ENST00000400259 TCRBV7S3A2A0A539 114 aa16.39■□□□□ 0.21
CDC42-203ENST00000400259 RASA4BC9J798 803 aa16.39■□□□□ 0.21
CDC42-203ENST00000400259 TNPO2O14787 897 aaKnown RBP16.39■□□□□ 0.21
CDC42-203ENST00000400259 RASA4O43374 803 aa16.39■□□□□ 0.21
CDC42-203ENST00000400259 CPP00450 1065 aa16.39■□□□□ 0.21
CDC42-203ENST00000400259 PHBP35232 272 aa16.39■□□□□ 0.21
CDC42-203ENST00000400259 RNASELQ05823 741 aaKnown RBP16.39■□□□□ 0.21
CDC42-203ENST00000400259 IFT88Q13099 833 aa16.39■□□□□ 0.21
CDC42-203ENST00000400259 KCNJ11Q14654 390 aa16.39■□□□□ 0.21
CDC42-203ENST00000400259 TMED2Q15363 201 aa16.39■□□□□ 0.21
CDC42-203ENST00000400259 CA9Q16790 459 aa16.39■□□□□ 0.21
CDC42-203ENST00000400259 MSS51Q4VC12 460 aa16.39■□□□□ 0.21
CDC42-203ENST00000400259 TWF2Q6IBS0 349 aaKnown RBP16.39■□□□□ 0.21
CDC42-203ENST00000400259 SRRM1Q8IYB3 904 aaKnown RBP16.39■□□□□ 0.21
CDC42-203ENST00000400259 B3GALNT2Q8NCR0 500 aa16.39■□□□□ 0.21
CDC42-203ENST00000400259 SLC2A14Q8TDB8 520 aa16.39■□□□□ 0.21
CDC42-203ENST00000400259 CLEC4CQ8WTT0 213 aa16.39■□□□□ 0.21
CDC42-203ENST00000400259 PYROXD1Q8WU10 500 aa16.39■□□□□ 0.21
CDC42-203ENST00000400259 WDR83Q9BRX9 315 aaKnown RBP16.39■□□□□ 0.21
CDC42-203ENST00000400259 ZFYVE28Q9HCC9 887 aa16.39■□□□□ 0.21
CDC42-203ENST00000400259 GPATCH2LQ9NWQ4 482 aa16.39■□□□□ 0.21
CDC42-203ENST00000400259 XPO7Q9UIA9 1087 aaKnown RBP16.39■□□□□ 0.21
CDC42-203ENST00000400259 GOLGA8MH3BSY2 632 aa16.38■□□□□ 0.21
CDC42-203ENST00000400259 CHADO15335 359 aa16.38■□□□□ 0.21
CDC42-203ENST00000400259 BCAR1P56945 870 aa16.38■□□□□ 0.21
CDC42-203ENST00000400259 GJA9P57773 515 aa16.38■□□□□ 0.21
CDC42-203ENST00000400259 SF3A3Q12874 501 aaKnown RBP eCLIP16.38■□□□□ 0.21
CDC42-203ENST00000400259 RGMBQ6NW40 437 aa16.38■□□□□ 0.21
CDC42-203ENST00000400259 PPP1R21Q6ZMI0 780 aa16.38■□□□□ 0.21
CDC42-203ENST00000400259 ARHGEF18Q6ZSZ5 1173 aa16.38■□□□□ 0.21
CDC42-203ENST00000400259 ZC3H18Q86VM9 953 aaKnown RBP16.38■□□□□ 0.21
CDC42-203ENST00000400259 OSTM1Q86WC4 334 aa16.38■□□□□ 0.21
CDC42-203ENST00000400259 PDIK1LQ8N165 341 aa16.38■□□□□ 0.21
CDC42-203ENST00000400259 CKAP2Q8WWK9 683 aa16.38■□□□□ 0.21
CDC42-203ENST00000400259 KCNK9Q9NPC2 374 aa16.38■□□□□ 0.21
CDC42-203ENST00000400259 PAK5Q9P286 719 aa16.38■□□□□ 0.21
CDC42-203ENST00000400259 RABGEF1Q9UJ41 708 aa16.38■□□□□ 0.21
CDC42-203ENST00000400259 H7C0C1 242 aa16.38■□□□□ 0.21
CDC42-203ENST00000400259 TOMM70O94826 608 aa16.38■□□□□ 0.21
CDC42-203ENST00000400259 TFE3P19532 575 aaPredicted RBP16.38■□□□□ 0.21
CDC42-203ENST00000400259 TKTP29401 623 aaKnown RBP16.38■□□□□ 0.21
CDC42-203ENST00000400259 L1CAMP32004 1257 aa16.38■□□□□ 0.21
CDC42-203ENST00000400259 ATP5OP48047 213 aa16.38■□□□□ 0.21
CDC42-203ENST00000400259 IFNAR2P48551 515 aa16.38■□□□□ 0.21
CDC42-203ENST00000400259 ITIH4Q14624 930 aa16.38■□□□□ 0.21
CDC42-203ENST00000400259 SPRED3Q2MJR0 410 aa16.38■□□□□ 0.21
CDC42-203ENST00000400259 EFHC1Q5JVL4 640 aa16.38■□□□□ 0.21
CDC42-203ENST00000400259 HP1BP3Q5SSJ5 553 aaPredicted RBP16.38■□□□□ 0.21
CDC42-203ENST00000400259 C1orf228Q6PIY5 440 aa16.38■□□□□ 0.21
CDC42-203ENST00000400259 STRADAQ7RTN6 431 aa16.38■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms