RNA–Protein interactions for RNA: ENST00000400017.6

RPGRIP1-202, Transcript of RPGR interacting protein 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene RPGRIP1, Length 3,940 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPGRIP1-202ENST00000400017 SDC4P31431 198 aa14.01□□□□□ -0.17
RPGRIP1-202ENST00000400017 ZC3H12AQ5D1E8 599 aaKnown RBP14.01□□□□□ -0.17
RPGRIP1-202ENST00000400017 EEF1DP3Q658K8 133 aa14.01□□□□□ -0.17
RPGRIP1-202ENST00000400017 SCUBE1Q8IWY4 988 aa14.01□□□□□ -0.17
RPGRIP1-202ENST00000400017 AGBL3Q8NEM8 1001 aa14.01□□□□□ -0.17
RPGRIP1-202ENST00000400017 PPP4R1Q8TF05 950 aa14.01□□□□□ -0.17
RPGRIP1-202ENST00000400017 ATP2A3Q93084 1043 aa14.01□□□□□ -0.17
RPGRIP1-202ENST00000400017 CEP41Q9BYV8 373 aa14.01□□□□□ -0.17
RPGRIP1-202ENST00000400017 PAK5Q9P286 719 aa14.01□□□□□ -0.17
RPGRIP1-202ENST00000400017 HMGXB4Q9UGU5 601 aa14.01□□□□□ -0.17
RPGRIP1-202ENST00000400017 AKT3Q9Y243 479 aa14.01□□□□□ -0.17
RPGRIP1-202ENST00000400017 RAB6CQ53S08 254 aa14.01□□□□□ -0.17
RPGRIP1-202ENST00000400017 IZUMO2Q6UXV1 221 aa14.01□□□□□ -0.17
RPGRIP1-202ENST00000400017 RAB6CQ9H0N0 254 aa14.01□□□□□ -0.17
RPGRIP1-202ENST00000400017 IFT122Q9HBG6 1241 aa14.01□□□□□ -0.17
RPGRIP1-202ENST00000400017 WDR35Q9P2L0 1181 aa14.01□□□□□ -0.17
RPGRIP1-202ENST00000400017 SPATA31C2B4DYI2 1134 aa14□□□□□ -0.17
RPGRIP1-202ENST00000400017 USP1O94782 785 aa14□□□□□ -0.17
RPGRIP1-202ENST00000400017 UBA1P22314 1058 aaKnown RBP14□□□□□ -0.17
RPGRIP1-202ENST00000400017 RPL10AP62906 217 aaKnown RBP14□□□□□ -0.17
RPGRIP1-202ENST00000400017 UBAP2LQ14157 1087 aaKnown RBP14□□□□□ -0.17
RPGRIP1-202ENST00000400017 FKBP1CQ5VVH2 108 aa14□□□□□ -0.17
RPGRIP1-202ENST00000400017 ISLR2Q6UXK2 745 aa14□□□□□ -0.17
RPGRIP1-202ENST00000400017 CDHR3Q6ZTQ4 885 aa14□□□□□ -0.17
RPGRIP1-202ENST00000400017 NME8Q8N427 588 aa14□□□□□ -0.17
RPGRIP1-202ENST00000400017 FAM149B1Q96BN6 582 aa14□□□□□ -0.17
RPGRIP1-202ENST00000400017 SYT15Q9BQS2 421 aa14□□□□□ -0.17
RPGRIP1-202ENST00000400017 RNF19AQ9NV58 838 aa14□□□□□ -0.17
RPGRIP1-202ENST00000400017 LRCH1Q9Y2L9 728 aa14□□□□□ -0.17
RPGRIP1-202ENST00000400017 FARP1Q9Y4F1 1045 aaPredicted RBP14□□□□□ -0.17
RPGRIP1-202ENST00000400017 NR2E3Q9Y5X4 410 aa14□□□□□ -0.17
RPGRIP1-202ENST00000400017 EME2A4GXA9 379 aaPredicted RBP14□□□□□ -0.17
RPGRIP1-202ENST00000400017 E5RJQ4 531 aa14□□□□□ -0.17
RPGRIP1-202ENST00000400017 E7ENQ6 273 aa14□□□□□ -0.17
RPGRIP1-202ENST00000400017 GNAZP19086 355 aa14□□□□□ -0.17
RPGRIP1-202ENST00000400017 CACNA2D1P54289 1103 aa14□□□□□ -0.17
RPGRIP1-202ENST00000400017 GADL1Q6ZQY3 521 aa14□□□□□ -0.17
RPGRIP1-202ENST00000400017 POLNQ7Z5Q5 900 aa14□□□□□ -0.17
RPGRIP1-202ENST00000400017 SLC44A1Q8WWI5 657 aa14□□□□□ -0.17
RPGRIP1-202ENST00000400017 SEPT1Q8WYJ6 367 aa14□□□□□ -0.17
RPGRIP1-202ENST00000400017 PAPOLBQ9NRJ5 636 aaKnown RBP14□□□□□ -0.17
RPGRIP1-202ENST00000400017 APOBEC2Q9Y235 224 aaKnown RBP14□□□□□ -0.17
RPGRIP1-202ENST00000400017 CXorf49A8MYA2 514 aaPredicted RBP14□□□□□ -0.17
RPGRIP1-202ENST00000400017 NFICP08651 508 aa14□□□□□ -0.17
RPGRIP1-202ENST00000400017 KCNA4P22459 653 aa14□□□□□ -0.17
RPGRIP1-202ENST00000400017 ARL2P36404 184 aa14□□□□□ -0.17
RPGRIP1-202ENST00000400017 PSEN1P49768 467 aa14□□□□□ -0.17
RPGRIP1-202ENST00000400017 TUBP50607 506 aa14□□□□□ -0.17
RPGRIP1-202ENST00000400017 AP2B1P63010 937 aa14□□□□□ -0.17
RPGRIP1-202ENST00000400017 BIRC2Q13490 618 aa14□□□□□ -0.17
RPGRIP1-202ENST00000400017 RBBP5Q15291 538 aaKnown RBP14□□□□□ -0.17
RPGRIP1-202ENST00000400017 TMEM192Q8IY95 271 aa14□□□□□ -0.17
RPGRIP1-202ENST00000400017 EFCAB3Q8N7B9 438 aa14□□□□□ -0.17
RPGRIP1-202ENST00000400017 TMEM174Q8WUU8 243 aa14□□□□□ -0.17
RPGRIP1-202ENST00000400017 CLMNQ96JQ2 1002 aa14□□□□□ -0.17
RPGRIP1-202ENST00000400017 HOXC10Q9NYD6 342 aa14□□□□□ -0.17
RPGRIP1-202ENST00000400017 HESX1Q9UBX0 185 aa14□□□□□ -0.17
RPGRIP1-202ENST00000400017 CYTH4Q9UIA0 394 aa14□□□□□ -0.17
RPGRIP1-202ENST00000400017 LRRC42Q9Y546 428 aa14□□□□□ -0.17
RPGRIP1-202ENST00000400017 NUMBLQ9Y6R0 609 aa14□□□□□ -0.17
RPGRIP1-202ENST00000400017 STBD1O95210 358 aa13.99□□□□□ -0.17
RPGRIP1-202ENST00000400017 TRUB2O95900 331 aaKnown RBP13.99□□□□□ -0.17
RPGRIP1-202ENST00000400017 LINGO3P0C6S8 592 aa13.99□□□□□ -0.17
RPGRIP1-202ENST00000400017 SLC25A11Q02978 314 aaKnown RBP13.99□□□□□ -0.17
RPGRIP1-202ENST00000400017 RBM15BQ8NDT2 890 aaKnown RBP13.99□□□□□ -0.17
RPGRIP1-202ENST00000400017 ZNF398Q8TD17 642 aa13.99□□□□□ -0.17
RPGRIP1-202ENST00000400017 FGD4Q96M96 766 aa13.99□□□□□ -0.17
RPGRIP1-202ENST00000400017 GMLQ99445 158 aa13.99□□□□□ -0.17
RPGRIP1-202ENST00000400017 C12orf29Q8N999 325 aa13.99□□□□□ -0.17
RPGRIP1-202ENST00000400017 FAM172AQ8WUF8 416 aa13.99□□□□□ -0.17
RPGRIP1-202ENST00000400017 TWNKQ96RR1 684 aa13.99□□□□□ -0.17
RPGRIP1-202ENST00000400017 PDGFDQ9GZP0 370 aaPredicted RBP13.99□□□□□ -0.17
RPGRIP1-202ENST00000400017 C2CD2Q9Y426 696 aa13.99□□□□□ -0.17
RPGRIP1-202ENST00000400017 EN1Q05925 392 aaPredicted RBP13.99□□□□□ -0.17
RPGRIP1-202ENST00000400017 AMHR2Q16671 573 aa13.99□□□□□ -0.17
RPGRIP1-202ENST00000400017 GRAMD1BQ3KR37 738 aa13.99□□□□□ -0.17
RPGRIP1-202ENST00000400017 ZPBP2Q6X784 338 aa13.99□□□□□ -0.17
RPGRIP1-202ENST00000400017 SDCCAG8Q86SQ7 713 aaPredicted RBP13.99□□□□□ -0.17
RPGRIP1-202ENST00000400017 SESTD1Q86VW0 696 aa13.99□□□□□ -0.17
RPGRIP1-202ENST00000400017 XYLT1Q86Y38 959 aa13.99□□□□□ -0.17
RPGRIP1-202ENST00000400017 SCUBE3Q8IX30 993 aa13.99□□□□□ -0.17
RPGRIP1-202ENST00000400017 TMEM176AQ96HP8 235 aa13.99□□□□□ -0.17
RPGRIP1-202ENST00000400017 ACO2Q99798 780 aaKnown RBP13.99□□□□□ -0.17
RPGRIP1-202ENST00000400017 PDLIM7Q9NR12 457 aa13.99□□□□□ -0.17
RPGRIP1-202ENST00000400017 ZNF214Q9UL59 606 aaPredicted RBP13.99□□□□□ -0.17
RPGRIP1-202ENST00000400017 PRR5-ARHGAP8B1AHC4 643 aa13.98□□□□□ -0.17
RPGRIP1-202ENST00000400017 LGR5O75473 907 aa13.98□□□□□ -0.17
RPGRIP1-202ENST00000400017 LYPLA1O75608 230 aaPredicted RBP13.98□□□□□ -0.17
RPGRIP1-202ENST00000400017 PDE5AO76074 875 aa13.98□□□□□ -0.17
RPGRIP1-202ENST00000400017 SLC18A1P54219 525 aa13.98□□□□□ -0.17
RPGRIP1-202ENST00000400017 ARHGAP8P85298 464 aa13.98□□□□□ -0.17
RPGRIP1-202ENST00000400017 SLC25A3Q00325 362 aa13.98□□□□□ -0.17
RPGRIP1-202ENST00000400017 HIC1Q14526 733 aa13.98□□□□□ -0.17
RPGRIP1-202ENST00000400017 TRMT10BQ6PF06 316 aaKnown RBP13.98□□□□□ -0.17
RPGRIP1-202ENST00000400017 MPZL3Q6UWV2 235 aa13.98□□□□□ -0.17
RPGRIP1-202ENST00000400017 ARFGAP1Q8N6T3 406 aa13.98□□□□□ -0.17
RPGRIP1-202ENST00000400017 HPDLQ96IR7 371 aa13.98□□□□□ -0.17
RPGRIP1-202ENST00000400017 CPB2Q96IY4 423 aa13.98□□□□□ -0.17
RPGRIP1-202ENST00000400017 KANSL3Q9P2N6 904 aa13.98□□□□□ -0.17
RPGRIP1-202ENST00000400017 DNAJC16Q9Y2G8 782 aa13.98□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms