RNA–Protein interactions for RNA: ENST00000399641.5

CACNA1C-217, Transcript of calcium voltage-gated channel subunit alpha1 C, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CACNA1C, Length 6,511 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1C-217ENST00000399641 HBP1O60381 514 aa11.48□□□□□ -0.57
CACNA1C-217ENST00000399641 DBIP07108 87 aaKnown RBP11.48□□□□□ -0.57
CACNA1C-217ENST00000399641 RBM23Q86U06 439 aaKnown RBP11.48□□□□□ -0.57
CACNA1C-217ENST00000399641 NLNQ9BYT8 704 aa11.48□□□□□ -0.57
CACNA1C-217ENST00000399641 ANTXR1Q9H6X2 564 aa11.48□□□□□ -0.57
CACNA1C-217ENST00000399641 MCUBQ9NWR8 336 aa11.48□□□□□ -0.57
CACNA1C-217ENST00000399641 DNAJC12Q9UKB3 198 aa11.48□□□□□ -0.57
CACNA1C-217ENST00000399641 TDRKHQ9Y2W6 561 aaKnown RBP11.48□□□□□ -0.57
CACNA1C-217ENST00000399641 POLRMTO00411 1230 aaKnown RBP11.48□□□□□ -0.57
CACNA1C-217ENST00000399641 APOL1O14791 398 aa11.48□□□□□ -0.57
CACNA1C-217ENST00000399641 ZNF189O75820 626 aaPredicted RBP11.48□□□□□ -0.57
CACNA1C-217ENST00000399641 RPLP2P05387 115 aaKnown RBP11.48□□□□□ -0.57
CACNA1C-217ENST00000399641 MYL2P10916 166 aa11.48□□□□□ -0.57
CACNA1C-217ENST00000399641 TSNQ15631 228 aaKnown RBP11.48□□□□□ -0.57
CACNA1C-217ENST00000399641 HIST2H2ACQ16777 129 aaPredicted RBP11.48□□□□□ -0.57
CACNA1C-217ENST00000399641 HIST2H2AA3Q6FI13 130 aa11.48□□□□□ -0.57
CACNA1C-217ENST00000399641 ABRAXAS1Q6UWZ7 409 aa11.48□□□□□ -0.57
CACNA1C-217ENST00000399641 C16orf89Q6UX73 402 aa11.48□□□□□ -0.57
CACNA1C-217ENST00000399641 RASSF6Q6ZTQ3 369 aa11.48□□□□□ -0.57
CACNA1C-217ENST00000399641 MMGT1Q8N4V1 131 aa11.48□□□□□ -0.57
CACNA1C-217ENST00000399641 ZBTB10Q96DT7 871 aa11.48□□□□□ -0.57
CACNA1C-217ENST00000399641 CINPQ9BW66 212 aaPredicted RBP11.48□□□□□ -0.57
CACNA1C-217ENST00000399641 HAUS4Q9H6D7 363 aa11.48□□□□□ -0.57
CACNA1C-217ENST00000399641 STK39Q9UEW8 545 aa11.48□□□□□ -0.57
CACNA1C-217ENST00000399641 RGS10O43665 173 aa11.48□□□□□ -0.57
CACNA1C-217ENST00000399641 TCEA1P23193 301 aaKnown RBP11.48□□□□□ -0.57
CACNA1C-217ENST00000399641 COLEC12Q5KU26 742 aa11.48□□□□□ -0.57
CACNA1C-217ENST00000399641 HERC6Q8IVU3 1022 aa11.48□□□□□ -0.57
CACNA1C-217ENST00000399641 FIBCD1Q8N539 461 aa11.48□□□□□ -0.57
CACNA1C-217ENST00000399641 PTPRN2Q92932 1015 aa11.48□□□□□ -0.57
CACNA1C-217ENST00000399641 GPRASP2Q96D09 838 aa11.48□□□□□ -0.57
CACNA1C-217ENST00000399641 KCNS3Q9BQ31 491 aa11.48□□□□□ -0.57
CACNA1C-217ENST00000399641 MROH8Q9H579 483 aa11.48□□□□□ -0.57
CACNA1C-217ENST00000399641 CNOT8Q9UFF9 292 aaKnown RBP11.48□□□□□ -0.57
CACNA1C-217ENST00000399641 MRPS7Q9Y2R9 242 aaKnown RBP11.48□□□□□ -0.57
CACNA1C-217ENST00000399641 SSH2Q76I76 1423 aa11.48□□□□□ -0.57
CACNA1C-217ENST00000399641 SAC3D1A6NKF1 404 aa11.48□□□□□ -0.57
CACNA1C-217ENST00000399641 EVPLLA8MZ36 301 aa11.48□□□□□ -0.57
CACNA1C-217ENST00000399641 ZNF879B4DU55 563 aa11.48□□□□□ -0.57
CACNA1C-217ENST00000399641 PTGISQ16647 500 aa11.48□□□□□ -0.57
CACNA1C-217ENST00000399641 ZNF366Q8N895 744 aa11.48□□□□□ -0.57
CACNA1C-217ENST00000399641 TRPV3Q8NET8 790 aa11.48□□□□□ -0.57
CACNA1C-217ENST00000399641 FBXO32Q969P5 355 aa11.48□□□□□ -0.57
CACNA1C-217ENST00000399641 KIF2CQ99661 725 aa11.48□□□□□ -0.57
CACNA1C-217ENST00000399641 ALKBH4Q9NXW9 302 aa11.48□□□□□ -0.57
CACNA1C-217ENST00000399641 CDC42BPGQ6DT37 1551 aa11.47□□□□□ -0.57
CACNA1C-217ENST00000399641 CCNA2P20248 432 aa11.47□□□□□ -0.57
CACNA1C-217ENST00000399641 GRK3P35626 688 aa11.47□□□□□ -0.57
CACNA1C-217ENST00000399641 MTTPP55157 894 aa11.47□□□□□ -0.57
CACNA1C-217ENST00000399641 INHBEP58166 350 aa11.47□□□□□ -0.57
CACNA1C-217ENST00000399641 RPL10AP62906 217 aaKnown RBP11.47□□□□□ -0.57
CACNA1C-217ENST00000399641 GFPT1Q06210 699 aaPredicted RBP11.47□□□□□ -0.57
CACNA1C-217ENST00000399641 TFDP2Q14188 446 aa11.47□□□□□ -0.57
CACNA1C-217ENST00000399641 CASP8Q14790 479 aa11.47□□□□□ -0.57
CACNA1C-217ENST00000399641 SPANXN2Q5MJ10 180 aa11.47□□□□□ -0.57
CACNA1C-217ENST00000399641 RAB11FIP2Q7L804 512 aa11.47□□□□□ -0.57
CACNA1C-217ENST00000399641 AGGF1Q8N302 714 aaeCLIP11.47□□□□□ -0.57
CACNA1C-217ENST00000399641 GPD1LQ8N335 351 aa11.47□□□□□ -0.57
CACNA1C-217ENST00000399641 LINC00116Q8NCU8 138 aa11.47□□□□□ -0.57
CACNA1C-217ENST00000399641 SGF29Q96ES7 293 aa11.47□□□□□ -0.57
CACNA1C-217ENST00000399641 TRIM51Q9BSJ1 452 aa11.47□□□□□ -0.57
CACNA1C-217ENST00000399641 KDM6AO15550 1401 aaPredicted RBP11.47□□□□□ -0.57
CACNA1C-217ENST00000399641 ESYT3A0FGR9 886 aa11.47□□□□□ -0.57
CACNA1C-217ENST00000399641 MSCO60682 206 aa11.47□□□□□ -0.57
CACNA1C-217ENST00000399641 IL5RAQ01344 420 aa11.47□□□□□ -0.57
CACNA1C-217ENST00000399641 C2orf76Q3KRA6 126 aa11.47□□□□□ -0.57
CACNA1C-217ENST00000399641 JAMLQ86YT9 394 aa11.47□□□□□ -0.57
CACNA1C-217ENST00000399641 ATP6V0D2Q8N8Y2 350 aa11.47□□□□□ -0.57
CACNA1C-217ENST00000399641 C12orf50Q8NA57 414 aaPredicted RBP11.47□□□□□ -0.57
CACNA1C-217ENST00000399641 TMEM47Q9BQJ4 181 aa11.47□□□□□ -0.57
CACNA1C-217ENST00000399641 CYP27B1O15528 508 aa11.47□□□□□ -0.57
CACNA1C-217ENST00000399641 GNA15P30679 374 aa11.47□□□□□ -0.57
CACNA1C-217ENST00000399641 QRICH1Q2TAL8 776 aa11.47□□□□□ -0.57
CACNA1C-217ENST00000399641 LRRC6Q86X45 466 aa11.47□□□□□ -0.57
CACNA1C-217ENST00000399641 COL23A1Q86Y22 540 aaPredicted RBP11.47□□□□□ -0.57
CACNA1C-217ENST00000399641 SYNPOQ8N3V7 929 aa11.47□□□□□ -0.57
CACNA1C-217ENST00000399641 HASPINQ8TF76 798 aa11.47□□□□□ -0.57
CACNA1C-217ENST00000399641 MTFMTQ96DP5 389 aaKnown RBP11.47□□□□□ -0.57
CACNA1C-217ENST00000399641 OMDQ99983 421 aa11.47□□□□□ -0.57
CACNA1C-217ENST00000399641 SLITRK2Q9H156 845 aa11.47□□□□□ -0.57
CACNA1C-217ENST00000399641 TRIT1Q9H3H1 467 aaKnown RBP11.47□□□□□ -0.57
CACNA1C-217ENST00000399641 SH3BGRL2Q9UJC5 107 aa11.47□□□□□ -0.57
CACNA1C-217ENST00000399641 DUSP12Q9UNI6 340 aa11.47□□□□□ -0.57
CACNA1C-217ENST00000399641 HIF3AQ9Y2N7 669 aa11.47□□□□□ -0.57
CACNA1C-217ENST00000399641 GPC6Q9Y625 555 aaPredicted RBP11.47□□□□□ -0.57
CACNA1C-217ENST00000399641 CHP2O43745 196 aa11.47□□□□□ -0.57
CACNA1C-217ENST00000399641 ENTPD3O75355 529 aa11.47□□□□□ -0.57
CACNA1C-217ENST00000399641 PIK3R1P27986 724 aa11.47□□□□□ -0.57
CACNA1C-217ENST00000399641 RGS7P49802 495 aa11.47□□□□□ -0.57
CACNA1C-217ENST00000399641 AP3M2P53677 418 aa11.47□□□□□ -0.57
CACNA1C-217ENST00000399641 PTSQ03393 145 aa11.47□□□□□ -0.57
CACNA1C-217ENST00000399641 DLG1Q12959 904 aa11.47□□□□□ -0.57
CACNA1C-217ENST00000399641 PITRM1Q5JRX3 1037 aa11.47□□□□□ -0.57
CACNA1C-217ENST00000399641 HLA-DQA1Q5Y7H0 255 aa11.47□□□□□ -0.57
CACNA1C-217ENST00000399641 CALR3Q96L12 384 aaKnown RBP11.47□□□□□ -0.57
CACNA1C-217ENST00000399641 ZNF285Q96NJ3 590 aa11.47□□□□□ -0.57
CACNA1C-217ENST00000399641 KLHL3Q9UH77 587 aa11.47□□□□□ -0.57
CACNA1C-217ENST00000399641 CDC23Q9UJX2 597 aa11.47□□□□□ -0.57
CACNA1C-217ENST00000399641 CPDO75976 1380 aa11.47□□□□□ -0.57
CACNA1C-217ENST00000399641 LOC100653049A0A140TA62 436 aa11.47□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms