RNA–Protein interactions for RNA: ENST00000399523.5

UFD1-202, Transcript of ubiquitin recognition factor in ER associated degradation 1, humanhuman

TSL 1 (best) BASIC

Gene UFD1, Length 1,007 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UFD1-202ENST00000399523 ACOX2Q99424 681 aa19.22■□□□□ 0.67
UFD1-202ENST00000399523 GABRG3Q99928 467 aa19.22■□□□□ 0.67
UFD1-202ENST00000399523 FAM213AQ9BRX8 229 aa19.22■□□□□ 0.67
UFD1-202ENST00000399523 CD93Q9NPY3 652 aa19.22■□□□□ 0.67
UFD1-202ENST00000399523 SPHK2Q9NRA0 654 aa19.22■□□□□ 0.67
UFD1-202ENST00000399523 F8VP50 259 aa19.21■□□□□ 0.67
UFD1-202ENST00000399523 PPP1R37O75864 691 aa19.21■□□□□ 0.67
UFD1-202ENST00000399523 ATXN1LP0C7T5 689 aaKnown RBP19.21■□□□□ 0.67
UFD1-202ENST00000399523 CYP27A1Q02318 531 aa19.21■□□□□ 0.67
UFD1-202ENST00000399523 MCM6Q14566 821 aa19.21■□□□□ 0.67
UFD1-202ENST00000399523 RILPL1Q5EBL4 403 aa19.21■□□□□ 0.67
UFD1-202ENST00000399523 TDRD10Q5VZ19 366 aaKnown RBP19.21■□□□□ 0.67
UFD1-202ENST00000399523 SDE2Q6IQ49 451 aa19.21■□□□□ 0.67
UFD1-202ENST00000399523 TMEM25Q86YD3 366 aa19.21■□□□□ 0.67
UFD1-202ENST00000399523 CHPFQ8IZ52 775 aa19.21■□□□□ 0.67
UFD1-202ENST00000399523 GALNT15Q8N3T1 639 aa19.21■□□□□ 0.67
UFD1-202ENST00000399523 SPRYD3Q8NCJ5 442 aa19.21■□□□□ 0.67
UFD1-202ENST00000399523 ZSWIM2Q8NEG5 633 aa19.21■□□□□ 0.67
UFD1-202ENST00000399523 MYCBPAPQ8TBZ2 947 aa19.21■□□□□ 0.67
UFD1-202ENST00000399523 HVCN1Q96D96 273 aa19.21■□□□□ 0.67
UFD1-202ENST00000399523 PCED1BQ96HM7 432 aa19.21■□□□□ 0.67
UFD1-202ENST00000399523 FAM84AQ96KN4 292 aa19.21■□□□□ 0.67
UFD1-202ENST00000399523 AK8Q96MA6 479 aa19.21■□□□□ 0.67
UFD1-202ENST00000399523 SLITRK1Q96PX8 696 aa19.21■□□□□ 0.67
UFD1-202ENST00000399523 CDC6Q99741 560 aa19.21■□□□□ 0.67
UFD1-202ENST00000399523 STRA6Q9BX79 667 aa19.21■□□□□ 0.67
UFD1-202ENST00000399523 IL21RQ9HBE5 538 aa19.21■□□□□ 0.67
UFD1-202ENST00000399523 TRIM24O15164 1050 aa19.2■□□□□ 0.66
UFD1-202ENST00000399523 KRT19P08727 400 aa19.2■□□□□ 0.66
UFD1-202ENST00000399523 MARCH9Q86YJ5 346 aa19.2■□□□□ 0.66
UFD1-202ENST00000399523 SLC39A7Q92504 469 aa19.2■□□□□ 0.66
UFD1-202ENST00000399523 CALML4Q96GE6 196 aa19.2■□□□□ 0.66
UFD1-202ENST00000399523 GAREM1Q9H706 876 aa19.2■□□□□ 0.66
UFD1-202ENST00000399523 TM7SF3Q9NS93 570 aa19.2■□□□□ 0.66
UFD1-202ENST00000399523 RBAKQ9NYW8 714 aaPredicted RBP19.2■□□□□ 0.66
UFD1-202ENST00000399523 PCDHGB2Q9Y5G2 931 aa19.2■□□□□ 0.66
UFD1-202ENST00000399523 COCHO43405 550 aa19.19■□□□□ 0.66
UFD1-202ENST00000399523 CILPO75339 1184 aa19.19■□□□□ 0.66
UFD1-202ENST00000399523 CER1O95813 267 aa19.19■□□□□ 0.66
UFD1-202ENST00000399523 WARSP23381 471 aaKnown RBP19.19■□□□□ 0.66
UFD1-202ENST00000399523 CD6P30203 668 aa19.19■□□□□ 0.66
UFD1-202ENST00000399523 ANO4Q32M45 955 aa19.19■□□□□ 0.66
UFD1-202ENST00000399523 METTL3Q86U44 580 aaKnown RBP19.19■□□□□ 0.66
UFD1-202ENST00000399523 BBS7Q8IWZ6 715 aa19.19■□□□□ 0.66
UFD1-202ENST00000399523 PDCD7Q8N8D1 485 aaKnown RBP19.19■□□□□ 0.66
UFD1-202ENST00000399523 RAD54LQ92698 747 aa19.19■□□□□ 0.66
UFD1-202ENST00000399523 MTMR12Q9C0I1 747 aa19.19■□□□□ 0.66
UFD1-202ENST00000399523 SLC6A17Q9H1V8 727 aa19.19■□□□□ 0.66
UFD1-202ENST00000399523 FNDC3AQ9Y2H6 1198 aaKnown RBP19.19■□□□□ 0.66
UFD1-202ENST00000399523 FLRT2O43155 660 aa19.18■□□□□ 0.66
UFD1-202ENST00000399523 LDHAP00338 332 aaKnown RBP19.18■□□□□ 0.66
UFD1-202ENST00000399523 PDGFRBP09619 1106 aa19.18■□□□□ 0.66
UFD1-202ENST00000399523 UBA7P41226 1012 aa19.18■□□□□ 0.66
UFD1-202ENST00000399523 MATKP42679 507 aa19.18■□□□□ 0.66
UFD1-202ENST00000399523 BNC1Q01954 994 aa19.18■□□□□ 0.66
UFD1-202ENST00000399523 KCNA1Q09470 495 aa19.18■□□□□ 0.66
UFD1-202ENST00000399523 MYO1EQ12965 1108 aa19.18■□□□□ 0.66
UFD1-202ENST00000399523 GRAMD4Q6IC98 578 aa19.18■□□□□ 0.66
UFD1-202ENST00000399523 IL27RAQ6UWB1 636 aa19.18■□□□□ 0.66
UFD1-202ENST00000399523 PDZD8Q8NEN9 1154 aa19.18■□□□□ 0.66
UFD1-202ENST00000399523 CADM4Q8NFZ8 388 aa19.18■□□□□ 0.66
UFD1-202ENST00000399523 RHBDD1Q8TEB9 315 aa19.18■□□□□ 0.66
UFD1-202ENST00000399523 OVCA2Q8WZ82 227 aa19.18■□□□□ 0.66
UFD1-202ENST00000399523 ERLEC1Q96DZ1 483 aa19.18■□□□□ 0.66
UFD1-202ENST00000399523 SAAL1Q96ER3 474 aa19.18■□□□□ 0.66
UFD1-202ENST00000399523 HPDLQ96IR7 371 aa19.18■□□□□ 0.66
UFD1-202ENST00000399523 PDE11AQ9HCR9 933 aa19.18■□□□□ 0.66
UFD1-202ENST00000399523 TMEM30AQ9NV96 361 aa19.18■□□□□ 0.66
UFD1-202ENST00000399523 WSB2Q9NYS7 404 aaPredicted RBP19.18■□□□□ 0.66
UFD1-202ENST00000399523 SH3BP1Q9Y3L3 701 aa19.18■□□□□ 0.66
UFD1-202ENST00000399523 PRRT4C9JH25 899 aa19.17■□□□□ 0.66
UFD1-202ENST00000399523 TULP1O00294 542 aaPredicted RBP19.17■□□□□ 0.66
UFD1-202ENST00000399523 GFRA2O00451 464 aa19.17■□□□□ 0.66
UFD1-202ENST00000399523 ATXN7O15265 892 aaPredicted RBP19.17■□□□□ 0.66
UFD1-202ENST00000399523 PLA2G2AP14555 144 aa19.17■□□□□ 0.66
UFD1-202ENST00000399523 ABCG1P45844 678 aa19.17■□□□□ 0.66
UFD1-202ENST00000399523 CACNA2D1P54289 1103 aa19.17■□□□□ 0.66
UFD1-202ENST00000399523 SMAD1Q15797 465 aaKnown RBP19.17■□□□□ 0.66
UFD1-202ENST00000399523 HLA-BQ31612 363 aa19.17■□□□□ 0.66
UFD1-202ENST00000399523 SNX30Q5VWJ9 437 aa19.17■□□□□ 0.66
UFD1-202ENST00000399523 ZCCHC9Q8N567 271 aaKnown RBP19.17■□□□□ 0.66
UFD1-202ENST00000399523 LSM14AQ8ND56 463 aaKnown RBP19.17■□□□□ 0.66
UFD1-202ENST00000399523 TOE1Q96GM8 510 aaKnown RBP19.17■□□□□ 0.66
UFD1-202ENST00000399523 KIF2CQ99661 725 aa19.17■□□□□ 0.66
UFD1-202ENST00000399523 PRDM16Q9HAZ2 1276 aa19.17■□□□□ 0.66
UFD1-202ENST00000399523 DNAJC17Q9NVM6 304 aaKnown RBP19.17■□□□□ 0.66
UFD1-202ENST00000399523 USP36Q9P275 1121 aaKnown RBP19.17■□□□□ 0.66
UFD1-202ENST00000399523 RAD54BQ9Y620 910 aa19.17■□□□□ 0.66
UFD1-202ENST00000399523 MEI4A8MW99 385 aa19.16■□□□□ 0.66
UFD1-202ENST00000399523 E9PAM4 449 aa19.16■□□□□ 0.66
UFD1-202ENST00000399523 BCAT2O15382 392 aaPredicted RBP19.16■□□□□ 0.66
UFD1-202ENST00000399523 CACNG3O60359 315 aa19.16■□□□□ 0.66
UFD1-202ENST00000399523 TMEM191BP0C7N4 346 aa19.16■□□□□ 0.66
UFD1-202ENST00000399523 NCAM1P13591 858 aa19.16■□□□□ 0.66
UFD1-202ENST00000399523 GARTP22102 1010 aa19.16■□□□□ 0.66
UFD1-202ENST00000399523 YWHAQP27348 245 aa19.16■□□□□ 0.66
UFD1-202ENST00000399523 TUBP50607 506 aa19.16■□□□□ 0.66
UFD1-202ENST00000399523 MDH1BQ5I0G3 518 aa19.16■□□□□ 0.66
UFD1-202ENST00000399523 HECTD3Q5T447 861 aa19.16■□□□□ 0.66
UFD1-202ENST00000399523 KIAA1324Q6UXG2 1013 aaKnown RBP19.16■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms