RNA–Protein interactions for RNA: ENST00000399306.6

CTNS-203, Transcript of cystinosin, lysosomal cystine transporter, humanhuman

TSL 3 BASIC

Gene CTNS, Length 803 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNS-203ENST00000399306 PDCL3Q9H2J4 239 aa18.57■□□□□ 0.56
CTNS-203ENST00000399306 TDP1Q9NUW8 608 aa18.57■□□□□ 0.56
CTNS-203ENST00000399306 CHORDC1Q9UHD1 332 aaPredicted RBP18.57■□□□□ 0.56
CTNS-203ENST00000399306 LUC7L2Q9Y383 392 aaKnown RBP18.57■□□□□ 0.56
CTNS-203ENST00000399306 BZW2Q9Y6E2 419 aaKnown RBP18.57■□□□□ 0.56
CTNS-203ENST00000399306 NUMBLQ9Y6R0 609 aa18.57■□□□□ 0.56
CTNS-203ENST00000399306 CYP1A1P04798 512 aaPredicted RBP18.56■□□□□ 0.56
CTNS-203ENST00000399306 RALAP11233 206 aa18.56■□□□□ 0.56
CTNS-203ENST00000399306 SP100P23497 879 aaPredicted RBP18.56■□□□□ 0.56
CTNS-203ENST00000399306 FMO1Q01740 532 aa18.56■□□□□ 0.56
CTNS-203ENST00000399306 ARID5BQ14865 1188 aa18.56■□□□□ 0.56
CTNS-203ENST00000399306 PARM1Q6UWI2 310 aa18.56■□□□□ 0.56
CTNS-203ENST00000399306 BHLHA9Q7RTU4 235 aa18.56■□□□□ 0.56
CTNS-203ENST00000399306 SCD5Q86SK9 330 aa18.56■□□□□ 0.56
CTNS-203ENST00000399306 DDX42Q86XP3 938 aaKnown RBP eCLIP18.56■□□□□ 0.56
CTNS-203ENST00000399306 MFSD6LQ8IWD5 586 aa18.56■□□□□ 0.56
CTNS-203ENST00000399306 UBALD2Q8IYN6 164 aa18.56■□□□□ 0.56
CTNS-203ENST00000399306 C1orf131Q8NDD1 294 aaKnown RBP18.56■□□□□ 0.56
CTNS-203ENST00000399306 FGF14Q92915 247 aa18.56■□□□□ 0.56
CTNS-203ENST00000399306 MRFAP1L1Q96HT8 127 aa18.56■□□□□ 0.56
CTNS-203ENST00000399306 TRIM5Q9C035 493 aa18.56■□□□□ 0.56
CTNS-203ENST00000399306 CD320Q9NPF0 282 aa18.56■□□□□ 0.56
CTNS-203ENST00000399306 OLA1Q9NTK5 396 aaKnown RBP18.56■□□□□ 0.56
CTNS-203ENST00000399306 MTPAPQ9NVV4 582 aaKnown RBP eCLIP18.56■□□□□ 0.56
CTNS-203ENST00000399306 ASNSD1Q9NWL6 643 aa18.56■□□□□ 0.56
CTNS-203ENST00000399306 CYTH4Q9UIA0 394 aa18.56■□□□□ 0.56
CTNS-203ENST00000399306 KIF26AQ9ULI4 1882 aaPredicted RBP18.55■□□□□ 0.56
CTNS-203ENST00000399306 C2orf78A6NCI8 922 aa18.55■□□□□ 0.56
CTNS-203ENST00000399306 DPYSL4O14531 572 aa18.55■□□□□ 0.56
CTNS-203ENST00000399306 TLR5O60602 858 aa18.55■□□□□ 0.56
CTNS-203ENST00000399306 GABBR2O75899 941 aa18.55■□□□□ 0.56
CTNS-203ENST00000399306 GYPCP04921 128 aa18.55■□□□□ 0.56
CTNS-203ENST00000399306 CKMP06732 381 aa18.55■□□□□ 0.56
CTNS-203ENST00000399306 GLI1P08151 1106 aa18.55■□□□□ 0.56
CTNS-203ENST00000399306 MMEP08473 750 aa18.55■□□□□ 0.56
CTNS-203ENST00000399306 CFHP08603 1231 aa18.55■□□□□ 0.56
CTNS-203ENST00000399306 TPM1P09493 284 aa18.55■□□□□ 0.56
CTNS-203ENST00000399306 CHRNB2P17787 502 aa18.55■□□□□ 0.56
CTNS-203ENST00000399306 HNRNPH3P31942 346 aaKnown RBP18.55■□□□□ 0.56
CTNS-203ENST00000399306 SCNN1AP37088 669 aa18.55■□□□□ 0.56
CTNS-203ENST00000399306 GABRB2P47870 512 aa18.55■□□□□ 0.56
CTNS-203ENST00000399306 RGS7P49802 495 aa18.55■□□□□ 0.56
CTNS-203ENST00000399306 YWHAGP61981 247 aaKnown RBP eCLIP18.55■□□□□ 0.56
CTNS-203ENST00000399306 NOMO3P69849 1222 aa18.55■□□□□ 0.56
CTNS-203ENST00000399306 FCHO2Q0JRZ9 810 aa18.55■□□□□ 0.56
CTNS-203ENST00000399306 ASIC2Q16515 512 aa18.55■□□□□ 0.56
CTNS-203ENST00000399306 TANGO2Q6ICL3 276 aa18.55■□□□□ 0.56
CTNS-203ENST00000399306 DRC7Q8IY82 874 aa18.55■□□□□ 0.56
CTNS-203ENST00000399306 SLC44A3Q8N4M1 653 aa18.55■□□□□ 0.56
CTNS-203ENST00000399306 IPO4Q8TEX9 1081 aaKnown RBP18.55■□□□□ 0.56
CTNS-203ENST00000399306 PPP1R13BQ96KQ4 1090 aa18.55■□□□□ 0.56
CTNS-203ENST00000399306 NECAB3Q96P71 396 aaPredicted RBP18.55■□□□□ 0.56
CTNS-203ENST00000399306 SYT11Q9BT88 431 aa18.55■□□□□ 0.56
CTNS-203ENST00000399306 TRPV5Q9NQA5 729 aa18.55■□□□□ 0.56
CTNS-203ENST00000399306 ABCC13Q9NSE7 274 aa18.55■□□□□ 0.56
CTNS-203ENST00000399306 NAGPAQ9UK23 515 aa18.55■□□□□ 0.56
CTNS-203ENST00000399306 A0A1W2PQH9 124 aa18.54■□□□□ 0.56
CTNS-203ENST00000399306 PSMC3P17980 439 aa18.54■□□□□ 0.56
CTNS-203ENST00000399306 ATP5C1P36542 298 aaKnown RBP18.54■□□□□ 0.56
CTNS-203ENST00000399306 PLCB2Q00722 1185 aa18.54■□□□□ 0.56
CTNS-203ENST00000399306 ARL14EPQ8N8R7 260 aaPredicted RBP18.54■□□□□ 0.56
CTNS-203ENST00000399306 GOLGA1Q92805 767 aa18.54■□□□□ 0.56
CTNS-203ENST00000399306 USP13Q92995 863 aaPredicted RBP18.54■□□□□ 0.56
CTNS-203ENST00000399306 CPXM1Q96SM3 734 aa18.54■□□□□ 0.56
CTNS-203ENST00000399306 AGPAT1Q99943 283 aa18.54■□□□□ 0.56
CTNS-203ENST00000399306 NMUR1Q9HB89 426 aa18.54■□□□□ 0.56
CTNS-203ENST00000399306 TRPC7Q9HCX4 862 aa18.54■□□□□ 0.56
CTNS-203ENST00000399306 SLC2A4RGQ9NR83 387 aa18.54■□□□□ 0.56
CTNS-203ENST00000399306 ST7Q9NRC1 585 aa18.54■□□□□ 0.56
CTNS-203ENST00000399306 TMEM51Q9NW97 253 aa18.54■□□□□ 0.56
CTNS-203ENST00000399306 DUSP12Q9UNI6 340 aa18.54■□□□□ 0.56
CTNS-203ENST00000399306 HEPACAM2A8MVW5 462 aa18.53■□□□□ 0.56
CTNS-203ENST00000399306 E5RJQ4 531 aa18.53■□□□□ 0.56
CTNS-203ENST00000399306 COCHO43405 550 aa18.53■□□□□ 0.56
CTNS-203ENST00000399306 PRAMEF12O95522 483 aa18.53■□□□□ 0.56
CTNS-203ENST00000399306 ABL1P00519 1130 aa18.53■□□□□ 0.56
CTNS-203ENST00000399306 SRFP11831 508 aa18.53■□□□□ 0.56
CTNS-203ENST00000399306 UNGP13051 313 aaPredicted RBP18.53■□□□□ 0.56
CTNS-203ENST00000399306 RARGP13631 454 aa18.53■□□□□ 0.56
CTNS-203ENST00000399306 ALADP13716 330 aa18.53■□□□□ 0.56
CTNS-203ENST00000399306 LCP1P13796 627 aa18.53■□□□□ 0.56
CTNS-203ENST00000399306 USP4Q13107 963 aa18.53■□□□□ 0.56
CTNS-203ENST00000399306 PTPN20Q4JDL3 420 aa18.53■□□□□ 0.56
CTNS-203ENST00000399306 EFHC1Q5JVL4 640 aa18.53■□□□□ 0.56
CTNS-203ENST00000399306 TAF3Q5VWG9 929 aa18.53■□□□□ 0.56
CTNS-203ENST00000399306 BSPRYQ5W0U4 402 aa18.53■□□□□ 0.56
CTNS-203ENST00000399306 PASD1Q8IV76 773 aa18.53■□□□□ 0.56
CTNS-203ENST00000399306 BPIFB1Q8TDL5 484 aa18.53■□□□□ 0.56
CTNS-203ENST00000399306 SLC20A1Q8WUM9 679 aa18.53■□□□□ 0.56
CTNS-203ENST00000399306 SLC22A12Q96S37 553 aa18.53■□□□□ 0.56
CTNS-203ENST00000399306 RNF38Q9H0F5 515 aa18.53■□□□□ 0.56
CTNS-203ENST00000399306 THG1LQ9NWX6 298 aaKnown RBP18.53■□□□□ 0.56
CTNS-203ENST00000399306 OSER1Q9NX31 292 aa18.53■□□□□ 0.56
CTNS-203ENST00000399306 DNMT3LQ9UJW3 386 aa18.53■□□□□ 0.56
CTNS-203ENST00000399306 CUL9Q8IWT3 2517 aa18.53■□□□□ 0.56
CTNS-203ENST00000399306 YJEFN3A6XGL0 299 aa18.52■□□□□ 0.56
CTNS-203ENST00000399306 E7ENQ6 273 aa18.52■□□□□ 0.56
CTNS-203ENST00000399306 TNFRSF10AO00220 468 aa18.52■□□□□ 0.56
CTNS-203ENST00000399306 CHADO15335 359 aa18.52■□□□□ 0.56
CTNS-203ENST00000399306 PAPSS1O43252 624 aaPredicted RBP18.52■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms