RNA–Protein interactions for RNA: ENST00000399256.4

APOB-202, Transcript of apolipoprotein B, humanhuman

TSL 1 (best) BASIC

Gene APOB, Length 3,128 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOB-202ENST00000399256 TTLL3Q9Y4R7 772 aa14.54□□□□□ -0.08
APOB-202ENST00000399256 COMMD3-BMI1R4GMX3 469 aa14.54□□□□□ -0.08
APOB-202ENST00000399256 TXNDC9O14530 226 aa14.54□□□□□ -0.08
APOB-202ENST00000399256 MCF2LO15068 1137 aa14.54□□□□□ -0.08
APOB-202ENST00000399256 SNRPAP09012 282 aaKnown RBP14.54□□□□□ -0.08
APOB-202ENST00000399256 TSHRP16473 764 aa14.54□□□□□ -0.08
APOB-202ENST00000399256 PEX2P28328 305 aa14.54□□□□□ -0.08
APOB-202ENST00000399256 SFNP31947 248 aa14.54□□□□□ -0.08
APOB-202ENST00000399256 CPOXP36551 454 aa14.54□□□□□ -0.08
APOB-202ENST00000399256 KRT76Q01546 638 aa14.54□□□□□ -0.08
APOB-202ENST00000399256 FAXCQ5TGI0 409 aa14.54□□□□□ -0.08
APOB-202ENST00000399256 TRIM42Q8IWZ5 723 aa14.54□□□□□ -0.08
APOB-202ENST00000399256 DDX55Q8NHQ9 600 aaKnown RBP eCLIP14.54□□□□□ -0.08
APOB-202ENST00000399256 SPATA18Q8TC71 538 aa14.54□□□□□ -0.08
APOB-202ENST00000399256 FAF2Q96CS3 445 aa14.54□□□□□ -0.08
APOB-202ENST00000399256 HAPLN3Q96S86 360 aa14.54□□□□□ -0.08
APOB-202ENST00000399256 CCDC28BQ9BUN5 200 aa14.54□□□□□ -0.08
APOB-202ENST00000399256 APOL6Q9BWW8 343 aa14.54□□□□□ -0.08
APOB-202ENST00000399256 ARHGAP28Q9P2N2 729 aa14.54□□□□□ -0.08
APOB-202ENST00000399256 HERC5Q9UII4 1024 aaKnown RBP14.54□□□□□ -0.08
APOB-202ENST00000399256 SOX13Q9UN79 622 aa14.54□□□□□ -0.08
APOB-202ENST00000399256 A0A0B4J269 797 aa14.53□□□□□ -0.08
APOB-202ENST00000399256 KRT37O76014 449 aa14.53□□□□□ -0.08
APOB-202ENST00000399256 STK10O94804 968 aaKnown RBP14.53□□□□□ -0.08
APOB-202ENST00000399256 CST3P01034 146 aaPredicted RBP14.53□□□□□ -0.08
APOB-202ENST00000399256 ZNF132P52740 706 aa14.53□□□□□ -0.08
APOB-202ENST00000399256 DLG1Q12959 904 aa14.53□□□□□ -0.08
APOB-202ENST00000399256 HNRNPDQ14103 355 aaKnown RBP14.53□□□□□ -0.08
APOB-202ENST00000399256 DARS2Q6PI48 645 aaKnown RBP14.53□□□□□ -0.08
APOB-202ENST00000399256 ISLR2Q6UXK2 745 aa14.53□□□□□ -0.08
APOB-202ENST00000399256 KYAT3Q6YP21 454 aaKnown RBP14.53□□□□□ -0.08
APOB-202ENST00000399256 SCARA5Q6ZMJ2 495 aa14.53□□□□□ -0.08
APOB-202ENST00000399256 CDAN1Q8IWY9 1227 aa14.53□□□□□ -0.08
APOB-202ENST00000399256 EFCAB3Q8N7B9 438 aa14.53□□□□□ -0.08
APOB-202ENST00000399256 NIPA2Q8N8Q9 360 aa14.53□□□□□ -0.08
APOB-202ENST00000399256 NMD3Q96D46 503 aaKnown RBP14.53□□□□□ -0.08
APOB-202ENST00000399256 C17orf75Q9HAS0 396 aa14.53□□□□□ -0.08
APOB-202ENST00000399256 ETNK2Q9NVF9 386 aa14.53□□□□□ -0.08
APOB-202ENST00000399256 SIRPGQ9P1W8 387 aa14.53□□□□□ -0.08
APOB-202ENST00000399256 ITGBL1O95965 494 aaPredicted RBP14.53□□□□□ -0.08
APOB-202ENST00000399256 SERPINA6P08185 405 aa14.53□□□□□ -0.08
APOB-202ENST00000399256 RPS6P62753 249 aaKnown RBP14.53□□□□□ -0.08
APOB-202ENST00000399256 SWSAP1Q6NVH7 229 aa14.53□□□□□ -0.08
APOB-202ENST00000399256 POLNQ7Z5Q5 900 aa14.53□□□□□ -0.08
APOB-202ENST00000399256 SPATA24Q86W54 205 aa14.53□□□□□ -0.08
APOB-202ENST00000399256 GDPD5Q8WTR4 605 aa14.53□□□□□ -0.08
APOB-202ENST00000399256 TFAP2BQ92481 460 aa14.53□□□□□ -0.08
APOB-202ENST00000399256 MMP19Q99542 508 aa14.53□□□□□ -0.08
APOB-202ENST00000399256 TRIM56Q9BRZ2 755 aaKnown RBP14.53□□□□□ -0.08
APOB-202ENST00000399256 PIM2Q9P1W9 311 aa14.53□□□□□ -0.08
APOB-202ENST00000399256 G3BP2Q9UN86 482 aaKnown RBP14.53□□□□□ -0.08
APOB-202ENST00000399256 TBC1D30Q9Y2I9 924 aa14.53□□□□□ -0.08
APOB-202ENST00000399256 PCDHA10Q9Y5I2 948 aa14.53□□□□□ -0.08
APOB-202ENST00000399256 TOM1L1O75674 476 aa14.52□□□□□ -0.08
APOB-202ENST00000399256 RFPL1O75677 317 aa14.52□□□□□ -0.08
APOB-202ENST00000399256 KRT7P08729 469 aa14.52□□□□□ -0.08
APOB-202ENST00000399256 MAP3K10Q02779 954 aa14.52□□□□□ -0.08
APOB-202ENST00000399256 ENPEPQ07075 957 aa14.52□□□□□ -0.08
APOB-202ENST00000399256 MMRN1Q13201 1228 aa14.52□□□□□ -0.08
APOB-202ENST00000399256 RTKN2Q8IZC4 609 aa14.52□□□□□ -0.08
APOB-202ENST00000399256 CGRRF1Q99675 332 aa14.52□□□□□ -0.08
APOB-202ENST00000399256 MSTO1Q9BUK6 570 aa14.52□□□□□ -0.08
APOB-202ENST00000399256 DEFB129Q9H1M3 183 aa14.52□□□□□ -0.08
APOB-202ENST00000399256 CYP4F11Q9HBI6 524 aa14.52□□□□□ -0.08
APOB-202ENST00000399256 SMYD2Q9NRG4 433 aa14.52□□□□□ -0.08
APOB-202ENST00000399256 CLIC5Q9NZA1 410 aa14.52□□□□□ -0.08
APOB-202ENST00000399256 LYPLA1O75608 230 aaPredicted RBP14.52□□□□□ -0.08
APOB-202ENST00000399256 LSM8O95777 96 aaKnown RBP14.52□□□□□ -0.08
APOB-202ENST00000399256 KRT3P12035 628 aa14.52□□□□□ -0.08
APOB-202ENST00000399256 UQCRBP14927 111 aa14.52□□□□□ -0.08
APOB-202ENST00000399256 HIRAP54198 1017 aaPredicted RBP14.52□□□□□ -0.08
APOB-202ENST00000399256 YWHAZP63104 245 aaKnown RBP14.52□□□□□ -0.08
APOB-202ENST00000399256 ROR1Q01973 937 aa14.52□□□□□ -0.08
APOB-202ENST00000399256 TAP1Q03518 808 aa14.52□□□□□ -0.08
APOB-202ENST00000399256 CCNIQ14094 377 aa14.52□□□□□ -0.08
APOB-202ENST00000399256 KCNJ11Q14654 390 aa14.52□□□□□ -0.08
APOB-202ENST00000399256 HADHQ16836 314 aaKnown RBP14.52□□□□□ -0.08
APOB-202ENST00000399256 MTERF2Q49AM1 385 aa14.52□□□□□ -0.08
APOB-202ENST00000399256 ANGEL2Q5VTE6 544 aaKnown RBP14.52□□□□□ -0.08
APOB-202ENST00000399256 DENND5BQ6ZUT9 1274 aa14.52□□□□□ -0.08
APOB-202ENST00000399256 NME8Q8N427 588 aa14.52□□□□□ -0.08
APOB-202ENST00000399256 TMEM143Q96AN5 459 aa14.52□□□□□ -0.08
APOB-202ENST00000399256 TARS2Q9BW92 718 aaKnown RBP14.52□□□□□ -0.08
APOB-202ENST00000399256 IMPG2Q9BZV3 1241 aa14.52□□□□□ -0.08
APOB-202ENST00000399256 KLHL4Q9C0H6 718 aa14.52□□□□□ -0.08
APOB-202ENST00000399256 RAB6BQ9NRW1 208 aa14.52□□□□□ -0.08
APOB-202ENST00000399256 ATXN10Q9UBB4 475 aa14.52□□□□□ -0.08
APOB-202ENST00000399256 APOC4-APOC2K7ER74 178 aa14.52□□□□□ -0.09
APOB-202ENST00000399256 PGM3O95394 542 aa14.52□□□□□ -0.09
APOB-202ENST00000399256 APOC2P02655 101 aa14.52□□□□□ -0.09
APOB-202ENST00000399256 C1QAP02745 245 aa14.52□□□□□ -0.09
APOB-202ENST00000399256 PABPC4LP0CB38 370 aaKnown RBP14.52□□□□□ -0.09
APOB-202ENST00000399256 USP4Q13107 963 aa14.52□□□□□ -0.09
APOB-202ENST00000399256 STX3Q13277 289 aa14.52□□□□□ -0.09
APOB-202ENST00000399256 MMEL1Q495T6 779 aa14.52□□□□□ -0.09
APOB-202ENST00000399256 DENND1BQ6P3S1 775 aa14.52□□□□□ -0.09
APOB-202ENST00000399256 MCF2L2Q86YR7 1114 aa14.52□□□□□ -0.09
APOB-202ENST00000399256 THNSL1Q8IYQ7 743 aa14.52□□□□□ -0.09
APOB-202ENST00000399256 NDUFAF2Q8N183 169 aa14.52□□□□□ -0.09
APOB-202ENST00000399256 PPP1R14CQ8TAE6 165 aa14.52□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms