RNA–Protein interactions for RNA: ENST00000399082.7

HLA-DQB1-203, Transcript of major histocompatibility complex, class II, DQ beta 1, humanhuman

BASIC

Gene HLA-DQB1, Length 1,219 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB1-203ENST00000399082 SLC46A2Q9BY10 475 aa13.05□□□□□ -0.32
HLA-DQB1-203ENST00000399082 MIS12Q9H081 205 aa13.05□□□□□ -0.32
HLA-DQB1-203ENST00000399082 ATXN3LQ9H3M9 355 aa13.05□□□□□ -0.32
HLA-DQB1-203ENST00000399082 CNGB3Q9NQW8 809 aa13.05□□□□□ -0.32
HLA-DQB1-203ENST00000399082 ST7Q9NRC1 585 aa13.05□□□□□ -0.32
HLA-DQB1-203ENST00000399082 CDH7Q9ULB5 785 aa13.05□□□□□ -0.32
HLA-DQB1-203ENST00000399082 HELZP42694 1942 aaKnown RBP13.05□□□□□ -0.32
HLA-DQB1-203ENST00000399082 LOC730098B7Z3J9 87 aa13.04□□□□□ -0.32
HLA-DQB1-203ENST00000399082 PRAMEF12O95522 483 aa13.04□□□□□ -0.32
HLA-DQB1-203ENST00000399082 FGF19O95750 216 aa13.04□□□□□ -0.32
HLA-DQB1-203ENST00000399082 OLFM2O95897 454 aa13.04□□□□□ -0.32
HLA-DQB1-203ENST00000399082 FYNP06241 537 aa13.04□□□□□ -0.32
HLA-DQB1-203ENST00000399082 CCDC172P0C7W6 258 aa13.04□□□□□ -0.32
HLA-DQB1-203ENST00000399082 ACADSBP45954 432 aa13.04□□□□□ -0.32
HLA-DQB1-203ENST00000399082 GABRB2P47870 512 aa13.04□□□□□ -0.32
HLA-DQB1-203ENST00000399082 ZP2Q05996 745 aa13.04□□□□□ -0.32
HLA-DQB1-203ENST00000399082 TAF5Q15542 800 aa13.04□□□□□ -0.32
HLA-DQB1-203ENST00000399082 AAK1Q2M2I8 961 aa13.04□□□□□ -0.32
HLA-DQB1-203ENST00000399082 TDRD12Q587J7 1177 aaKnown RBP13.04□□□□□ -0.32
HLA-DQB1-203ENST00000399082 GPR158Q5T848 1215 aa13.04□□□□□ -0.32
HLA-DQB1-203ENST00000399082 OLFML1Q6UWY5 402 aa13.04□□□□□ -0.32
HLA-DQB1-203ENST00000399082 MMS22LQ6ZRQ5 1243 aa13.04□□□□□ -0.32
HLA-DQB1-203ENST00000399082 FAM183BPQ6ZVS7 135 aa13.04□□□□□ -0.32
HLA-DQB1-203ENST00000399082 MON1BQ7L1V2 547 aa13.04□□□□□ -0.32
HLA-DQB1-203ENST00000399082 CNGA4Q8IV77 575 aa13.04□□□□□ -0.32
HLA-DQB1-203ENST00000399082 SCUBE3Q8IX30 993 aa13.04□□□□□ -0.32
HLA-DQB1-203ENST00000399082 DRC7Q8IY82 874 aa13.04□□□□□ -0.32
HLA-DQB1-203ENST00000399082 SIX6OS1Q8N1H7 587 aa13.04□□□□□ -0.32
HLA-DQB1-203ENST00000399082 SPC24Q8NBT2 197 aa13.04□□□□□ -0.32
HLA-DQB1-203ENST00000399082 PDZD8Q8NEN9 1154 aa13.04□□□□□ -0.32
HLA-DQB1-203ENST00000399082 ST13P5Q8NFI4 369 aaPredicted RBP13.04□□□□□ -0.32
HLA-DQB1-203ENST00000399082 KHSRPQ92945 711 aaKnown RBP eCLIP13.04□□□□□ -0.32
HLA-DQB1-203ENST00000399082 RSPRY1Q96DX4 576 aa13.04□□□□□ -0.32
HLA-DQB1-203ENST00000399082 SLITRK1Q96PX8 696 aa13.04□□□□□ -0.32
HLA-DQB1-203ENST00000399082 RNF38Q9H0F5 515 aa13.04□□□□□ -0.32
HLA-DQB1-203ENST00000399082 PDCL3Q9H2J4 239 aa13.04□□□□□ -0.32
HLA-DQB1-203ENST00000399082 TASP1Q9H6P5 420 aa13.04□□□□□ -0.32
HLA-DQB1-203ENST00000399082 CCSER2Q9H7U1 834 aa13.04□□□□□ -0.32
HLA-DQB1-203ENST00000399082 EHD2Q9NZN4 543 aa13.04□□□□□ -0.32
HLA-DQB1-203ENST00000399082 TRPM5Q9NZQ8 1165 aa13.04□□□□□ -0.32
HLA-DQB1-203ENST00000399082 EPS15L1Q9UBC2 864 aa13.04□□□□□ -0.32
HLA-DQB1-203ENST00000399082 USTQ9Y2C2 406 aa13.04□□□□□ -0.32
HLA-DQB1-203ENST00000399082 CEP83Q9Y592 693 aa13.04□□□□□ -0.32
HLA-DQB1-203ENST00000399082 KIF26AQ9ULI4 1882 aaPredicted RBP13.04□□□□□ -0.32
HLA-DQB1-203ENST00000399082 A0A087X0T9 212 aa13.03□□□□□ -0.32
HLA-DQB1-203ENST00000399082 TCRBV5S1A1TA0A578 114 aa13.03□□□□□ -0.32
HLA-DQB1-203ENST00000399082 TPM1P09493 284 aa13.03□□□□□ -0.32
HLA-DQB1-203ENST00000399082 FAM228BP0C875 321 aa13.03□□□□□ -0.32
HLA-DQB1-203ENST00000399082 LAMP2P13473 410 aa13.03□□□□□ -0.32
HLA-DQB1-203ENST00000399082 TNFAIP3P21580 790 aa13.03□□□□□ -0.32
HLA-DQB1-203ENST00000399082 EIF4A3P38919 411 aaKnown RBP13.03□□□□□ -0.32
HLA-DQB1-203ENST00000399082 PPP3CCP48454 512 aa13.03□□□□□ -0.32
HLA-DQB1-203ENST00000399082 YWHAGP61981 247 aaKnown RBP eCLIP13.03□□□□□ -0.32
HLA-DQB1-203ENST00000399082 ZXDBP98169 803 aa13.03□□□□□ -0.32
HLA-DQB1-203ENST00000399082 FAM78AQ5JUQ0 283 aa13.03□□□□□ -0.32
HLA-DQB1-203ENST00000399082 MON1AQ86VX9 555 aa13.03□□□□□ -0.32
HLA-DQB1-203ENST00000399082 XYLT1Q86Y38 959 aa13.03□□□□□ -0.32
HLA-DQB1-203ENST00000399082 PHF13Q86YI8 300 aaPredicted RBP13.03□□□□□ -0.32
HLA-DQB1-203ENST00000399082 TMEM139Q8IV31 216 aa13.03□□□□□ -0.32
HLA-DQB1-203ENST00000399082 PHF6Q8IWS0 365 aaKnown RBP eCLIP13.03□□□□□ -0.32
HLA-DQB1-203ENST00000399082 MAB21L3Q8N8X9 362 aa13.03□□□□□ -0.32
HLA-DQB1-203ENST00000399082 IRGQQ8WZA9 623 aa13.03□□□□□ -0.32
HLA-DQB1-203ENST00000399082 MRPS31Q92665 395 aaKnown RBP13.03□□□□□ -0.32
HLA-DQB1-203ENST00000399082 RPGRIP1Q96KN7 1286 aa13.03□□□□□ -0.32
HLA-DQB1-203ENST00000399082 ZFRQ96KR1 1074 aaKnown RBP13.03□□□□□ -0.32
HLA-DQB1-203ENST00000399082 ASB16Q96NS5 453 aa13.03□□□□□ -0.32
HLA-DQB1-203ENST00000399082 GCNAQ96QF7 691 aa13.03□□□□□ -0.32
HLA-DQB1-203ENST00000399082 CYP2S1Q96SQ9 504 aa13.03□□□□□ -0.32
HLA-DQB1-203ENST00000399082 C11orf70Q9BRQ4 267 aa13.03□□□□□ -0.32
HLA-DQB1-203ENST00000399082 SMG9Q9H0W8 520 aaKnown RBP13.03□□□□□ -0.32
HLA-DQB1-203ENST00000399082 SEPT11Q9NVA2 429 aaKnown RBP13.03□□□□□ -0.32
HLA-DQB1-203ENST00000399082 MTPAPQ9NVV4 582 aaKnown RBP eCLIP13.03□□□□□ -0.32
HLA-DQB1-203ENST00000399082 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP13.03□□□□□ -0.32
HLA-DQB1-203ENST00000399082 GDE1Q9NZC3 331 aa13.03□□□□□ -0.32
HLA-DQB1-203ENST00000399082 NUDT5Q9UKK9 219 aa13.03□□□□□ -0.32
HLA-DQB1-203ENST00000399082 SSU72P8A0A1W2PR75 194 aa13.02□□□□□ -0.33
HLA-DQB1-203ENST00000399082 MDM4O15151 490 aa13.02□□□□□ -0.33
HLA-DQB1-203ENST00000399082 COCHO43405 550 aa13.02□□□□□ -0.33
HLA-DQB1-203ENST00000399082 FBXO21O94952 628 aa13.02□□□□□ -0.33
HLA-DQB1-203ENST00000399082 TBX18O95935 607 aa13.02□□□□□ -0.33
HLA-DQB1-203ENST00000399082 LTFP02788 710 aa13.02□□□□□ -0.33
HLA-DQB1-203ENST00000399082 GBP2P32456 591 aaPredicted RBP13.02□□□□□ -0.33
HLA-DQB1-203ENST00000399082 MRE11P49959 708 aa13.02□□□□□ -0.33
HLA-DQB1-203ENST00000399082 TUBP50607 506 aa13.02□□□□□ -0.33
HLA-DQB1-203ENST00000399082 CDK17Q00537 523 aa13.02□□□□□ -0.33
HLA-DQB1-203ENST00000399082 GSE1Q14687 1217 aa13.02□□□□□ -0.33
HLA-DQB1-203ENST00000399082 BSPRYQ5W0U4 402 aa13.02□□□□□ -0.33
HLA-DQB1-203ENST00000399082 ACAD10Q6JQN1 1059 aa13.02□□□□□ -0.33
HLA-DQB1-203ENST00000399082 TRNP1Q6NT89 227 aa13.02□□□□□ -0.33
HLA-DQB1-203ENST00000399082 OTOP3Q7RTS5 596 aa13.02□□□□□ -0.33
HLA-DQB1-203ENST00000399082 ERICH1Q86X53 443 aa13.02□□□□□ -0.33
HLA-DQB1-203ENST00000399082 ADHFE1Q8IWW8 467 aa13.02□□□□□ -0.33
HLA-DQB1-203ENST00000399082 ARL14EPQ8N8R7 260 aaPredicted RBP13.02□□□□□ -0.33
HLA-DQB1-203ENST00000399082 TDRD5Q8NAT2 981 aaKnown RBP13.02□□□□□ -0.33
HLA-DQB1-203ENST00000399082 ZSCAN18Q8TBC5 510 aaPredicted RBP13.02□□□□□ -0.33
HLA-DQB1-203ENST00000399082 ADAMTS19Q8TE59 1207 aa13.02□□□□□ -0.33
HLA-DQB1-203ENST00000399082 LRRC3BQ96PB8 259 aa13.02□□□□□ -0.33
HLA-DQB1-203ENST00000399082 PANX2Q96RD6 677 aa13.02□□□□□ -0.33
HLA-DQB1-203ENST00000399082 TRPC7Q9HCX4 862 aa13.02□□□□□ -0.33
HLA-DQB1-203ENST00000399082 CD320Q9NPF0 282 aa13.02□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 46.9 ms