RNA–Protein interactions for RNA: ENST00000399079.7

HLA-DQB1-202, Transcript of major histocompatibility complex, class II, DQ beta 1, humanhuman

BASIC

Gene HLA-DQB1, Length 1,501 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB1-202ENST00000399079 LCLAT1Q6UWP7 414 aa14.84□□□□□ -0.03
HLA-DQB1-202ENST00000399079 CCDC186Q7Z3E2 898 aa14.84□□□□□ -0.03
HLA-DQB1-202ENST00000399079 SCD5Q86SK9 330 aa14.84□□□□□ -0.03
HLA-DQB1-202ENST00000399079 ZNF687Q8N1G0 1237 aa14.84□□□□□ -0.03
HLA-DQB1-202ENST00000399079 OSCP1Q8WVF1 389 aa14.84□□□□□ -0.03
HLA-DQB1-202ENST00000399079 NDRG1Q92597 394 aaKnown RBP14.84□□□□□ -0.03
HLA-DQB1-202ENST00000399079 CHFRQ96EP1 664 aa14.84□□□□□ -0.03
HLA-DQB1-202ENST00000399079 UBXN6Q9BZV1 441 aa14.84□□□□□ -0.03
HLA-DQB1-202ENST00000399079 VPS16Q9H269 839 aa14.84□□□□□ -0.03
HLA-DQB1-202ENST00000399079 DUS2Q9NX74 493 aaKnown RBP14.84□□□□□ -0.03
HLA-DQB1-202ENST00000399079 CFAP97Q9P2B7 532 aa14.84□□□□□ -0.03
HLA-DQB1-202ENST00000399079 NAGPAQ9UK23 515 aa14.84□□□□□ -0.03
HLA-DQB1-202ENST00000399079 WDR3Q9UNX4 943 aaKnown RBP eCLIP14.84□□□□□ -0.03
HLA-DQB1-202ENST00000399079 MAN2B1O00754 1011 aa14.83□□□□□ -0.04
HLA-DQB1-202ENST00000399079 XPO1O14980 1071 aaKnown RBP14.83□□□□□ -0.04
HLA-DQB1-202ENST00000399079 GALR2O43603 387 aaPredicted RBP14.83□□□□□ -0.04
HLA-DQB1-202ENST00000399079 TCF3P15923 654 aa14.83□□□□□ -0.04
HLA-DQB1-202ENST00000399079 CTHP32929 405 aa14.83□□□□□ -0.04
HLA-DQB1-202ENST00000399079 USP8P40818 1118 aa14.83□□□□□ -0.04
HLA-DQB1-202ENST00000399079 MYL5Q02045 173 aa14.83□□□□□ -0.04
HLA-DQB1-202ENST00000399079 FZD5Q13467 585 aa14.83□□□□□ -0.04
HLA-DQB1-202ENST00000399079 KRT31Q15323 416 aa14.83□□□□□ -0.04
HLA-DQB1-202ENST00000399079 EML3Q32P44 896 aa14.83□□□□□ -0.04
HLA-DQB1-202ENST00000399079 DPY19L2P1Q6NXN4 242 aa14.83□□□□□ -0.04
HLA-DQB1-202ENST00000399079 ENOSF1Q7L5Y1 443 aa14.83□□□□□ -0.04
HLA-DQB1-202ENST00000399079 DTWD2Q8NBA8 298 aa14.83□□□□□ -0.04
HLA-DQB1-202ENST00000399079 WBP2Q969T9 261 aa14.83□□□□□ -0.04
HLA-DQB1-202ENST00000399079 NACA2Q9H009 215 aa14.83□□□□□ -0.04
HLA-DQB1-202ENST00000399079 C8orf33Q9H7E9 229 aaPredicted RBP14.83□□□□□ -0.04
HLA-DQB1-202ENST00000399079 CYLDQ9NQC7 956 aa14.83□□□□□ -0.04
HLA-DQB1-202ENST00000399079 MTPAPQ9NVV4 582 aaKnown RBP eCLIP14.83□□□□□ -0.04
HLA-DQB1-202ENST00000399079 KIF26AQ9ULI4 1882 aaPredicted RBP14.83□□□□□ -0.04
HLA-DQB1-202ENST00000399079 MYO16Q9Y6X6 1858 aa14.83□□□□□ -0.04
HLA-DQB1-202ENST00000399079 H0Y858 1186 aa14.82□□□□□ -0.04
HLA-DQB1-202ENST00000399079 M0QYV0 167 aa14.82□□□□□ -0.04
HLA-DQB1-202ENST00000399079 PIK3R2O00459 728 aa14.82□□□□□ -0.04
HLA-DQB1-202ENST00000399079 MDM4O15151 490 aa14.82□□□□□ -0.04
HLA-DQB1-202ENST00000399079 GABBR2O75899 941 aa14.82□□□□□ -0.04
HLA-DQB1-202ENST00000399079 LETM1O95202 739 aaPredicted RBP14.82□□□□□ -0.04
HLA-DQB1-202ENST00000399079 PNMA6AP0CW24 399 aaPredicted RBP14.82□□□□□ -0.04
HLA-DQB1-202ENST00000399079 RARGP13631 454 aa14.82□□□□□ -0.04
HLA-DQB1-202ENST00000399079 PLA2G4AP47712 749 aa14.82□□□□□ -0.04
HLA-DQB1-202ENST00000399079 IFNAR2P48551 515 aa14.82□□□□□ -0.04
HLA-DQB1-202ENST00000399079 RGS7P49802 495 aa14.82□□□□□ -0.04
HLA-DQB1-202ENST00000399079 MLLT6P55198 1093 aaPredicted RBP14.82□□□□□ -0.04
HLA-DQB1-202ENST00000399079 ADIGQ0VDE8 80 aa14.82□□□□□ -0.04
HLA-DQB1-202ENST00000399079 NCAPHQ15003 741 aa14.82□□□□□ -0.04
HLA-DQB1-202ENST00000399079 PDGFRLQ15198 375 aa14.82□□□□□ -0.04
HLA-DQB1-202ENST00000399079 ANO6Q4KMQ2 910 aa14.82□□□□□ -0.04
HLA-DQB1-202ENST00000399079 NAIF1Q69YI7 327 aaPredicted RBP14.82□□□□□ -0.04
HLA-DQB1-202ENST00000399079 PMF1Q6P1K2 205 aa14.82□□□□□ -0.04
HLA-DQB1-202ENST00000399079 RALGPS2Q86X27 583 aaPredicted RBP14.82□□□□□ -0.04
HLA-DQB1-202ENST00000399079 SLC35F5Q8WV83 523 aa14.82□□□□□ -0.04
HLA-DQB1-202ENST00000399079 SECISBP2LQ93073 1101 aaKnown RBP14.82□□□□□ -0.04
HLA-DQB1-202ENST00000399079 NELL2Q99435 816 aa14.82□□□□□ -0.04
HLA-DQB1-202ENST00000399079 OSBPL6Q9BZF3 934 aa14.82□□□□□ -0.04
HLA-DQB1-202ENST00000399079 ULBP1Q9BZM6 244 aa14.82□□□□□ -0.04
HLA-DQB1-202ENST00000399079 HSD3B7Q9H2F3 369 aa14.82□□□□□ -0.04
HLA-DQB1-202ENST00000399079 ECT2Q9H8V3 914 aa14.82□□□□□ -0.04
HLA-DQB1-202ENST00000399079 DNAJC12Q9UKB3 198 aa14.82□□□□□ -0.04
HLA-DQB1-202ENST00000399079 MRPS17Q9Y2R5 130 aaKnown RBP14.82□□□□□ -0.04
HLA-DQB1-202ENST00000399079 ZBED1O96006 694 aa14.82□□□□□ -0.04
HLA-DQB1-202ENST00000399079 SETSIPP0DME0 302 aa14.82□□□□□ -0.04
HLA-DQB1-202ENST00000399079 IRF1P10914 325 aa14.82□□□□□ -0.04
HLA-DQB1-202ENST00000399079 LCP1P13796 627 aa14.82□□□□□ -0.04
HLA-DQB1-202ENST00000399079 ATP5C1P36542 298 aaKnown RBP14.82□□□□□ -0.04
HLA-DQB1-202ENST00000399079 PON2Q15165 354 aa14.82□□□□□ -0.04
HLA-DQB1-202ENST00000399079 KLHL40Q2TBA0 621 aa14.82□□□□□ -0.04
HLA-DQB1-202ENST00000399079 AOPEPQ8N6M6 819 aa14.82□□□□□ -0.04
HLA-DQB1-202ENST00000399079 SHC3Q92529 594 aa14.82□□□□□ -0.04
HLA-DQB1-202ENST00000399079 KCNH6Q9H252 994 aa14.82□□□□□ -0.04
HLA-DQB1-202ENST00000399079 LRRC4Q9HBW1 653 aa14.82□□□□□ -0.04
HLA-DQB1-202ENST00000399079 HELZP42694 1942 aaKnown RBP14.81□□□□□ -0.04
HLA-DQB1-202ENST00000399079 CACNA1HO95180 2353 aa14.81□□□□□ -0.04
HLA-DQB1-202ENST00000399079 FOXN3O00409 490 aaPredicted RBP14.81□□□□□ -0.04
HLA-DQB1-202ENST00000399079 THAP12O43422 761 aa14.81□□□□□ -0.04
HLA-DQB1-202ENST00000399079 GNA15P30679 374 aa14.81□□□□□ -0.04
HLA-DQB1-202ENST00000399079 GJA4P35212 333 aa14.81□□□□□ -0.04
HLA-DQB1-202ENST00000399079 KLK7P49862 253 aa14.81□□□□□ -0.04
HLA-DQB1-202ENST00000399079 STILQ15468 1287 aa14.81□□□□□ -0.04
HLA-DQB1-202ENST00000399079 C10orf120Q5SQS8 335 aa14.81□□□□□ -0.04
HLA-DQB1-202ENST00000399079 KLHDC7AQ5VTJ3 777 aa14.81□□□□□ -0.04
HLA-DQB1-202ENST00000399079 PM20D1Q6GTS8 502 aa14.81□□□□□ -0.04
HLA-DQB1-202ENST00000399079 BHLHA9Q7RTU4 235 aa14.81□□□□□ -0.04
HLA-DQB1-202ENST00000399079 ADGRG2Q8IZP9 1017 aa14.81□□□□□ -0.04
HLA-DQB1-202ENST00000399079 ZNF606Q8WXB4 792 aa14.81□□□□□ -0.04
HLA-DQB1-202ENST00000399079 KCTD13Q8WZ19 329 aa14.81□□□□□ -0.04
HLA-DQB1-202ENST00000399079 ATP2A3Q93084 1043 aa14.81□□□□□ -0.04
HLA-DQB1-202ENST00000399079 CLDN23Q96B33 292 aa14.81□□□□□ -0.04
HLA-DQB1-202ENST00000399079 FAM81BQ96LP2 452 aa14.81□□□□□ -0.04
HLA-DQB1-202ENST00000399079 PRRX2Q99811 253 aa14.81□□□□□ -0.04
HLA-DQB1-202ENST00000399079 LMAN1LQ9HAT1 526 aa14.81□□□□□ -0.04
HLA-DQB1-202ENST00000399079 FBRSL1Q9HCM7 1045 aaKnown RBP14.81□□□□□ -0.04
HLA-DQB1-202ENST00000399079 RBM12Q9NTZ6 932 aaKnown RBP14.81□□□□□ -0.04
HLA-DQB1-202ENST00000399079 ARIH1Q9Y4X5 557 aaPredicted RBP14.81□□□□□ -0.04
HLA-DQB1-202ENST00000399079 FHOD1Q9Y613 1164 aa14.81□□□□□ -0.04
HLA-DQB1-202ENST00000399079 USP34Q70CQ2 3546 aa14.81□□□□□ -0.04
HLA-DQB1-202ENST00000399079 SYCE3A1L190 88 aa14.8□□□□□ -0.04
HLA-DQB1-202ENST00000399079 YJEFN3A6XGL0 299 aa14.8□□□□□ -0.04
HLA-DQB1-202ENST00000399079 E7ENQ6 273 aa14.8□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms