RNA–Protein interactions for RNA: ENST00000398587.6

PCDHGA11-201, Transcript of protocadherin gamma subfamily A, 11, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PCDHGA11, Length 4,647 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA11-201ENST00000398587 HIST1H2ADP20671 130 aa14.72□□□□□ -0.05
PCDHGA11-201ENST00000398587 MIPP30301 263 aa14.72□□□□□ -0.05
PCDHGA11-201ENST00000398587 ITIH4Q14624 930 aa14.72□□□□□ -0.05
PCDHGA11-201ENST00000398587 LBRQ14739 615 aaKnown RBP14.72□□□□□ -0.05
PCDHGA11-201ENST00000398587 CTXN3Q4LDR2 81 aa14.72□□□□□ -0.05
PCDHGA11-201ENST00000398587 SETD3Q86TU7 594 aaPredicted RBP14.72□□□□□ -0.05
PCDHGA11-201ENST00000398587 COPS5Q92905 334 aa14.72□□□□□ -0.05
PCDHGA11-201ENST00000398587 HIST1H2AHQ96KK5 128 aa14.72□□□□□ -0.05
PCDHGA11-201ENST00000398587 HIST1H2AJQ99878 128 aa14.72□□□□□ -0.05
PCDHGA11-201ENST00000398587 TINF2Q9BSI4 451 aa14.72□□□□□ -0.05
PCDHGA11-201ENST00000398587 H2AFJQ9BTM1 129 aa14.72□□□□□ -0.05
PCDHGA11-201ENST00000398587 CASTOR2A6NHX0 329 aa14.72□□□□□ -0.05
PCDHGA11-201ENST00000398587 TOMM70O94826 608 aa14.72□□□□□ -0.05
PCDHGA11-201ENST00000398587 RGS4P49798 205 aa14.72□□□□□ -0.05
PCDHGA11-201ENST00000398587 PHEXP78562 749 aa14.72□□□□□ -0.05
PCDHGA11-201ENST00000398587 SLC6A3Q01959 620 aa14.72□□□□□ -0.05
PCDHGA11-201ENST00000398587 NPY5RQ15761 445 aa14.72□□□□□ -0.05
PCDHGA11-201ENST00000398587 CNGA2Q16280 664 aa14.72□□□□□ -0.05
PCDHGA11-201ENST00000398587 RARS2Q5T160 578 aaKnown RBP14.72□□□□□ -0.05
PCDHGA11-201ENST00000398587 OVOS1Q6IE37 1185 aa14.72□□□□□ -0.05
PCDHGA11-201ENST00000398587 RFX8Q6ZV50 586 aa14.72□□□□□ -0.05
PCDHGA11-201ENST00000398587 PPP1R36Q96LQ0 422 aa14.72□□□□□ -0.05
PCDHGA11-201ENST00000398587 LATS2Q9NRM7 1088 aa14.72□□□□□ -0.05
PCDHGA11-201ENST00000398587 DCDC2Q9UHG0 476 aa14.72□□□□□ -0.05
PCDHGA11-201ENST00000398587 VPS9D1Q9Y2B5 631 aa14.72□□□□□ -0.05
PCDHGA11-201ENST00000398587 E2F8A0AVK6 867 aa14.71□□□□□ -0.05
PCDHGA11-201ENST00000398587 RNF225M0QZC1 329 aaPredicted RBP14.71□□□□□ -0.05
PCDHGA11-201ENST00000398587 MAP2K7O14733 419 aa14.71□□□□□ -0.05
PCDHGA11-201ENST00000398587 ZNF844Q08AG5 666 aa14.71□□□□□ -0.05
PCDHGA11-201ENST00000398587 ELAVL2Q12926 359 aaKnown RBP14.71□□□□□ -0.05
PCDHGA11-201ENST00000398587 UGCGQ16739 394 aa14.71□□□□□ -0.05
PCDHGA11-201ENST00000398587 SPDYCQ5MJ68 293 aa14.71□□□□□ -0.05
PCDHGA11-201ENST00000398587 NSL1Q96IY1 281 aa14.71□□□□□ -0.05
PCDHGA11-201ENST00000398587 MRPL1Q9BYD6 325 aaKnown RBP14.71□□□□□ -0.05
PCDHGA11-201ENST00000398587 SLC13A4Q9UKG4 626 aa14.71□□□□□ -0.05
PCDHGA11-201ENST00000398587 YDJCA8MPS7 323 aa14.71□□□□□ -0.05
PCDHGA11-201ENST00000398587 IRF1P10914 325 aa14.71□□□□□ -0.05
PCDHGA11-201ENST00000398587 PECAM1P16284 738 aaPredicted RBP14.71□□□□□ -0.05
PCDHGA11-201ENST00000398587 FMO1Q01740 532 aa14.71□□□□□ -0.05
PCDHGA11-201ENST00000398587 ADIGQ0VDE8 80 aa14.71□□□□□ -0.05
PCDHGA11-201ENST00000398587 CAPRIN1Q14444 709 aaKnown RBP14.71□□□□□ -0.05
PCDHGA11-201ENST00000398587 LRRC38Q5VT99 294 aa14.71□□□□□ -0.05
PCDHGA11-201ENST00000398587 ZNF280DQ6N043 979 aa14.71□□□□□ -0.05
PCDHGA11-201ENST00000398587 TMEM139Q8IV31 216 aa14.71□□□□□ -0.05
PCDHGA11-201ENST00000398587 CCDC33Q8N5R6 958 aa14.71□□□□□ -0.05
PCDHGA11-201ENST00000398587 TRPM4Q8TD43 1214 aa14.71□□□□□ -0.05
PCDHGA11-201ENST00000398587 DNPEPQ9ULA0 475 aa14.71□□□□□ -0.05
PCDHGA11-201ENST00000398587 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP14.71□□□□□ -0.06
PCDHGA11-201ENST00000398587 F8VP50 259 aa14.71□□□□□ -0.06
PCDHGA11-201ENST00000398587 RECQL4O94761 1208 aa14.71□□□□□ -0.06
PCDHGA11-201ENST00000398587 ST8SIA6P61647 398 aa14.71□□□□□ -0.06
PCDHGA11-201ENST00000398587 ZNF177Q13360 481 aaPredicted RBP14.71□□□□□ -0.06
PCDHGA11-201ENST00000398587 LRRC8EQ6NSJ5 796 aa14.71□□□□□ -0.06
PCDHGA11-201ENST00000398587 GPR63Q9BZJ6 419 aa14.71□□□□□ -0.06
PCDHGA11-201ENST00000398587 CDT1Q9H211 546 aa14.71□□□□□ -0.06
PCDHGA11-201ENST00000398587 CHST7Q9NS84 486 aa14.71□□□□□ -0.06
PCDHGA11-201ENST00000398587 REXO2Q9Y3B8 237 aaKnown RBP14.71□□□□□ -0.06
PCDHGA11-201ENST00000398587 F5H5T6 163 aa14.7□□□□□ -0.06
PCDHGA11-201ENST00000398587 APOC4-APOC2K7ER74 178 aa14.7□□□□□ -0.06
PCDHGA11-201ENST00000398587 APOC2P02655 101 aa14.7□□□□□ -0.06
PCDHGA11-201ENST00000398587 ACAT1P24752 427 aaKnown RBP14.7□□□□□ -0.06
PCDHGA11-201ENST00000398587 MRNIPQ6NTE8 343 aa14.7□□□□□ -0.06
PCDHGA11-201ENST00000398587 NUDT18Q6ZVK8 323 aa14.7□□□□□ -0.06
PCDHGA11-201ENST00000398587 UNC93AQ86WB7 457 aa14.7□□□□□ -0.06
PCDHGA11-201ENST00000398587 SCUBE3Q8IX30 993 aa14.7□□□□□ -0.06
PCDHGA11-201ENST00000398587 APBB2Q92870 758 aa14.7□□□□□ -0.06
PCDHGA11-201ENST00000398587 NRCAMQ92823 1304 aa14.7□□□□□ -0.06
PCDHGA11-201ENST00000398587 STX7O15400 261 aaKnown RBP14.7□□□□□ -0.06
PCDHGA11-201ENST00000398587 ESRRBO95718 433 aa14.7□□□□□ -0.06
PCDHGA11-201ENST00000398587 SH3BP5LQ7L8J4 393 aa14.7□□□□□ -0.06
PCDHGA11-201ENST00000398587 KIF2BQ8N4N8 673 aa14.7□□□□□ -0.06
PCDHGA11-201ENST00000398587 COLGALT1Q8NBJ5 622 aa14.7□□□□□ -0.06
PCDHGA11-201ENST00000398587 ICA1LQ8NDH6 482 aa14.7□□□□□ -0.06
PCDHGA11-201ENST00000398587 SLC2A14Q8TDB8 520 aa14.7□□□□□ -0.06
PCDHGA11-201ENST00000398587 SEPT8Q92599 483 aa14.7□□□□□ -0.06
PCDHGA11-201ENST00000398587 PGM2Q96G03 612 aa14.7□□□□□ -0.06
PCDHGA11-201ENST00000398587 ACO2Q99798 780 aaKnown RBP14.7□□□□□ -0.06
PCDHGA11-201ENST00000398587 THTPAQ9BU02 230 aa14.7□□□□□ -0.06
PCDHGA11-201ENST00000398587 CINPQ9BW66 212 aaPredicted RBP14.7□□□□□ -0.06
PCDHGA11-201ENST00000398587 KANSL3Q9P2N6 904 aa14.7□□□□□ -0.06
PCDHGA11-201ENST00000398587 CDYLQ9Y232 598 aa14.7□□□□□ -0.06
PCDHGA11-201ENST00000398587 TIMM13Q9Y5L4 95 aaPredicted RBP14.7□□□□□ -0.06
PCDHGA11-201ENST00000398587 SIGLEC16A6NMB1 481 aa14.7□□□□□ -0.06
PCDHGA11-201ENST00000398587 E5RJQ4 531 aa14.7□□□□□ -0.06
PCDHGA11-201ENST00000398587 GJB6O95452 261 aa14.7□□□□□ -0.06
PCDHGA11-201ENST00000398587 ENO3P13929 434 aaPredicted RBP14.7□□□□□ -0.06
PCDHGA11-201ENST00000398587 FSCN1Q16658 493 aaKnown RBP14.7□□□□□ -0.06
PCDHGA11-201ENST00000398587 PTRHD1Q6GMV3 140 aaKnown RBP14.7□□□□□ -0.06
PCDHGA11-201ENST00000398587 NLRP9Q7RTR0 991 aa14.7□□□□□ -0.06
PCDHGA11-201ENST00000398587 TMEM106CQ9BVX2 250 aa14.7□□□□□ -0.06
PCDHGA11-201ENST00000398587 IL10P22301 178 aa14.7□□□□□ -0.06
PCDHGA11-201ENST00000398587 NR2C2P49116 596 aa14.7□□□□□ -0.06
PCDHGA11-201ENST00000398587 CLK2P49760 499 aaKnown RBP14.7□□□□□ -0.06
PCDHGA11-201ENST00000398587 SERPINB8P50452 374 aa14.7□□□□□ -0.06
PCDHGA11-201ENST00000398587 POLE2P56282 527 aa14.7□□□□□ -0.06
PCDHGA11-201ENST00000398587 MAMLD1Q13495 774 aa14.7□□□□□ -0.06
PCDHGA11-201ENST00000398587 HASPINQ8TF76 798 aa14.7□□□□□ -0.06
PCDHGA11-201ENST00000398587 MFSD14AQ96MC6 490 aa14.7□□□□□ -0.06
PCDHGA11-201ENST00000398587 ILKAPQ9H0C8 392 aaPredicted RBP14.7□□□□□ -0.06
PCDHGA11-201ENST00000398587 STARD7Q9NQZ5 370 aa14.7□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms