RNA–Protein interactions for RNA: ENST00000398137.5

U2AF1-203, Transcript of U2 small nuclear RNA auxiliary factor 1, humanhuman

TSL 1 (best) BASIC

Gene U2AF1, Length 1,019 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
U2AF1-203ENST00000398137 F11P03951 625 aa26.81■■□□□ 1.88
U2AF1-203ENST00000398137 BPIFB4P59827 614 aa26.81■■□□□ 1.88
U2AF1-203ENST00000398137 ZNF852Q6ZMS4 543 aa26.81■■□□□ 1.88
U2AF1-203ENST00000398137 VSTM4Q8IW00 320 aa26.81■■□□□ 1.88
U2AF1-203ENST00000398137 ZNF606Q8WXB4 792 aa26.81■■□□□ 1.88
U2AF1-203ENST00000398137 NKD2Q969F2 451 aaPredicted RBP26.81■■□□□ 1.88
U2AF1-203ENST00000398137 NUP58Q9BVL2 599 aa26.81■■□□□ 1.88
U2AF1-203ENST00000398137 SLC46A2Q9BY10 475 aa26.81■■□□□ 1.88
U2AF1-203ENST00000398137 TASP1Q9H6P5 420 aa26.81■■□□□ 1.88
U2AF1-203ENST00000398137 MAGED2Q9UNF1 606 aaPredicted RBP26.81■■□□□ 1.88
U2AF1-203ENST00000398137 R4GN57 208 aa26.81■■□□□ 1.88
U2AF1-203ENST00000398137 LRRC53A6NM62 1247 aa26.8■■□□□ 1.88
U2AF1-203ENST00000398137 ZNF263O14978 683 aa26.8■■□□□ 1.88
U2AF1-203ENST00000398137 FGF19O95750 216 aa26.8■■□□□ 1.88
U2AF1-203ENST00000398137 CSH1P0DML2 217 aa26.8■■□□□ 1.88
U2AF1-203ENST00000398137 CSH2P0DML3 217 aa26.8■■□□□ 1.88
U2AF1-203ENST00000398137 CYP11B1P15538 503 aa26.8■■□□□ 1.88
U2AF1-203ENST00000398137 WEE1P30291 646 aa26.8■■□□□ 1.88
U2AF1-203ENST00000398137 PDE6CP51160 858 aa26.8■■□□□ 1.88
U2AF1-203ENST00000398137 ZNF75DP51815 510 aa26.8■■□□□ 1.88
U2AF1-203ENST00000398137 ARID5AQ03989 594 aa26.8■■□□□ 1.88
U2AF1-203ENST00000398137 PDE4CQ08493 712 aa26.8■■□□□ 1.88
U2AF1-203ENST00000398137 BST2Q10589 180 aaKnown RBP26.8■■□□□ 1.88
U2AF1-203ENST00000398137 SPECC1LQ69YQ0 1117 aa26.8■■□□□ 1.88
U2AF1-203ENST00000398137 DENND1BQ6P3S1 775 aa26.8■■□□□ 1.88
U2AF1-203ENST00000398137 E2F7Q96AV8 911 aa26.8■■□□□ 1.88
U2AF1-203ENST00000398137 NELL2Q99435 816 aa26.8■■□□□ 1.88
U2AF1-203ENST00000398137 MYH10P35580 1976 aa26.8■■□□□ 1.88
U2AF1-203ENST00000398137 TULP2O00295 520 aa26.79■■□□□ 1.88
U2AF1-203ENST00000398137 TADA3O75528 432 aa26.79■■□□□ 1.88
U2AF1-203ENST00000398137 GYPCP04921 128 aa26.79■■□□□ 1.88
U2AF1-203ENST00000398137 CDC25CP30307 473 aa26.79■■□□□ 1.88
U2AF1-203ENST00000398137 SLC5A3P53794 718 aa26.79■■□□□ 1.88
U2AF1-203ENST00000398137 SLC8A3P57103 927 aa26.79■■□□□ 1.88
U2AF1-203ENST00000398137 USP46P62068 366 aa26.79■■□□□ 1.88
U2AF1-203ENST00000398137 IFRD2Q12894 506 aaPredicted RBP26.79■■□□□ 1.88
U2AF1-203ENST00000398137 PKDCCQ504Y2 493 aa26.79■■□□□ 1.88
U2AF1-203ENST00000398137 DENND5BQ6ZUT9 1274 aa26.79■■□□□ 1.88
U2AF1-203ENST00000398137 GPRIN1Q7Z2K8 1008 aa26.79■■□□□ 1.88
U2AF1-203ENST00000398137 NOP9Q86U38 636 aaKnown RBP26.79■■□□□ 1.88
U2AF1-203ENST00000398137 EPS8L1Q8TE68 723 aa26.79■■□□□ 1.88
U2AF1-203ENST00000398137 CPLX3Q8WVH0 158 aa26.79■■□□□ 1.88
U2AF1-203ENST00000398137 SECISBP2LQ93073 1101 aaKnown RBP26.79■■□□□ 1.88
U2AF1-203ENST00000398137 ZFYVE19Q96K21 471 aa26.79■■□□□ 1.88
U2AF1-203ENST00000398137 CEP295NLQ96MC4 621 aa26.79■■□□□ 1.88
U2AF1-203ENST00000398137 EDEM3Q9BZQ6 932 aa26.79■■□□□ 1.88
U2AF1-203ENST00000398137 SMG9Q9H0W8 520 aaKnown RBP26.79■■□□□ 1.88
U2AF1-203ENST00000398137 MYO6Q9UM54 1294 aa26.79■■□□□ 1.88
U2AF1-203ENST00000398137 PIAS3Q9Y6X2 628 aa26.79■■□□□ 1.88
U2AF1-203ENST00000398137 RIF1Q5UIP0 2472 aaKnown RBP26.78■■□□□ 1.88
U2AF1-203ENST00000398137 A0A1W2PQJ5 194 aa26.78■■□□□ 1.88
U2AF1-203ENST00000398137 HHLA1C9JL84 531 aa26.78■■□□□ 1.88
U2AF1-203ENST00000398137 CHADO15335 359 aa26.78■■□□□ 1.88
U2AF1-203ENST00000398137 SETSIPP0DME0 302 aa26.78■■□□□ 1.88
U2AF1-203ENST00000398137 RPS9P46781 194 aaKnown RBP26.78■■□□□ 1.88
U2AF1-203ENST00000398137 TAF3Q5VWG9 929 aa26.78■■□□□ 1.88
U2AF1-203ENST00000398137 IQCDQ96DY2 449 aa26.78■■□□□ 1.88
U2AF1-203ENST00000398137 SPATA6Q9NWH7 488 aaPredicted RBP26.78■■□□□ 1.88
U2AF1-203ENST00000398137 OBP2AQ9NY56 170 aa26.78■■□□□ 1.88
U2AF1-203ENST00000398137 NDRG2Q9UN36 371 aaKnown RBP26.78■■□□□ 1.88
U2AF1-203ENST00000398137 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP26.78■■□□□ 1.88
U2AF1-203ENST00000398137 ANAPC1Q9H1A4 1944 aa26.78■■□□□ 1.88
U2AF1-203ENST00000398137 FAM186AA6NE01 2351 aa26.77■■□□□ 1.88
U2AF1-203ENST00000398137 TNFRSF10BO14763 440 aa26.77■■□□□ 1.88
U2AF1-203ENST00000398137 XPO1O14980 1071 aaKnown RBP26.77■■□□□ 1.88
U2AF1-203ENST00000398137 ARHGAP15Q53QZ3 475 aa26.77■■□□□ 1.88
U2AF1-203ENST00000398137 E4F1Q66K89 784 aaPredicted RBP26.77■■□□□ 1.88
U2AF1-203ENST00000398137 PIGZQ86VD9 579 aa26.77■■□□□ 1.88
U2AF1-203ENST00000398137 PASD1Q8IV76 773 aa26.77■■□□□ 1.88
U2AF1-203ENST00000398137 NUP93Q8N1F7 819 aa26.77■■□□□ 1.88
U2AF1-203ENST00000398137 SCAMP5Q8TAC9 235 aa26.77■■□□□ 1.88
U2AF1-203ENST00000398137 RIN3Q8TB24 985 aa26.77■■□□□ 1.88
U2AF1-203ENST00000398137 SLC20A1Q8WUM9 679 aa26.77■■□□□ 1.88
U2AF1-203ENST00000398137 PNPLA8Q9NP80 782 aa26.77■■□□□ 1.88
U2AF1-203ENST00000398137 NOCTQ9UK39 431 aaKnown RBP26.77■■□□□ 1.88
U2AF1-203ENST00000398137 FERP16591 822 aa26.76■■□□□ 1.87
U2AF1-203ENST00000398137 KRT9P35527 623 aa26.76■■□□□ 1.87
U2AF1-203ENST00000398137 MAGEA9P43362 315 aa26.76■■□□□ 1.87
U2AF1-203ENST00000398137 SOX9P48436 509 aa26.76■■□□□ 1.87
U2AF1-203ENST00000398137 ASIC2Q16515 512 aa26.76■■□□□ 1.87
U2AF1-203ENST00000398137 TMC6Q7Z403 805 aa26.76■■□□□ 1.87
U2AF1-203ENST00000398137 DDX1Q92499 740 aaKnown RBP26.76■■□□□ 1.87
U2AF1-203ENST00000398137 FAM3CQ92520 227 aa26.76■■□□□ 1.87
U2AF1-203ENST00000398137 TRMT2BQ96GJ1 504 aaKnown RBP26.76■■□□□ 1.87
U2AF1-203ENST00000398137 TTLL2Q9BWV7 592 aa26.76■■□□□ 1.87
U2AF1-203ENST00000398137 CAPN11Q9UMQ6 739 aa26.76■■□□□ 1.87
U2AF1-203ENST00000398137 CCL26Q9Y258 94 aa26.76■■□□□ 1.87
U2AF1-203ENST00000398137 MRPS17Q9Y2R5 130 aaKnown RBP26.76■■□□□ 1.87
U2AF1-203ENST00000398137 ZNF638Q14966 1978 aaKnown RBP26.76■■□□□ 1.87
U2AF1-203ENST00000398137 MAN2B1O00754 1011 aa26.75■■□□□ 1.87
U2AF1-203ENST00000398137 CASP14P31944 242 aa26.75■■□□□ 1.87
U2AF1-203ENST00000398137 PLA2G4AP47712 749 aa26.75■■□□□ 1.87
U2AF1-203ENST00000398137 RGS7P49802 495 aa26.75■■□□□ 1.87
U2AF1-203ENST00000398137 MLLT6P55198 1093 aaPredicted RBP26.75■■□□□ 1.87
U2AF1-203ENST00000398137 TRIM14Q14142 442 aa26.75■■□□□ 1.87
U2AF1-203ENST00000398137 MEA1Q16626 185 aa26.75■■□□□ 1.87
U2AF1-203ENST00000398137 SFMBT2Q5VUG0 894 aa26.75■■□□□ 1.87
U2AF1-203ENST00000398137 CMTM8Q8IZV2 173 aa26.75■■□□□ 1.87
U2AF1-203ENST00000398137 MRFAP1L1Q96HT8 127 aa26.75■■□□□ 1.87
U2AF1-203ENST00000398137 MYRFLQ96LU7 910 aa26.75■■□□□ 1.87
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms