RNA–Protein interactions for RNA: ENST00000397827.7

CHRFAM7A-202, Transcript of CHRNA7 (exons 5-10) and FAM7A (exons A-E) fusion, humanhuman

TSL 5 BASIC

Gene CHRFAM7A, Length 2,794 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRFAM7A-202ENST00000397827 HEY1Q9Y5J3 304 aa19.13■□□□□ 0.65
CHRFAM7A-202ENST00000397827 H7C0C1 242 aa19.12■□□□□ 0.65
CHRFAM7A-202ENST00000397827 MGRN1O60291 552 aa19.12■□□□□ 0.65
CHRFAM7A-202ENST00000397827 FGFR1P11362 822 aa19.12■□□□□ 0.65
CHRFAM7A-202ENST00000397827 ATP5OP48047 213 aa19.12■□□□□ 0.65
CHRFAM7A-202ENST00000397827 BNIP1Q12981 228 aa19.12■□□□□ 0.65
CHRFAM7A-202ENST00000397827 KRT81Q14533 505 aa19.12■□□□□ 0.65
CHRFAM7A-202ENST00000397827 GRIK4Q16099 956 aa19.12■□□□□ 0.65
CHRFAM7A-202ENST00000397827 GLRA4Q5JXX5 417 aa19.12■□□□□ 0.65
CHRFAM7A-202ENST00000397827 ANKLE1Q8NAG6 615 aa19.12■□□□□ 0.65
CHRFAM7A-202ENST00000397827 ACSS3Q9H6R3 686 aa19.12■□□□□ 0.65
CHRFAM7A-202ENST00000397827 RXFP1Q9HBX9 757 aa19.12■□□□□ 0.65
CHRFAM7A-202ENST00000397827 SNTG2Q9NY99 539 aa19.12■□□□□ 0.65
CHRFAM7A-202ENST00000397827 KAT6AQ92794 2004 aa19.12■□□□□ 0.65
CHRFAM7A-202ENST00000397827 ZSWIM8A7E2V4 1837 aa19.12■□□□□ 0.65
CHRFAM7A-202ENST00000397827 HCRTO43612 131 aa19.12■□□□□ 0.65
CHRFAM7A-202ENST00000397827 NPTXRO95502 500 aa19.12■□□□□ 0.65
CHRFAM7A-202ENST00000397827 ELK3P41970 407 aa19.12■□□□□ 0.65
CHRFAM7A-202ENST00000397827 LVRNQ6Q4G3 990 aa19.12■□□□□ 0.65
CHRFAM7A-202ENST00000397827 RNF157Q96PX1 679 aa19.12■□□□□ 0.65
CHRFAM7A-202ENST00000397827 YIPF3Q9GZM5 350 aa19.12■□□□□ 0.65
CHRFAM7A-202ENST00000397827 TRIM33Q9UPN9 1127 aa19.12■□□□□ 0.65
CHRFAM7A-202ENST00000397827 IL4RP24394 825 aa19.11■□□□□ 0.65
CHRFAM7A-202ENST00000397827 RAB27AP51159 221 aa19.11■□□□□ 0.65
CHRFAM7A-202ENST00000397827 RNASELQ05823 741 aaKnown RBP19.11■□□□□ 0.65
CHRFAM7A-202ENST00000397827 CA9Q16790 459 aa19.11■□□□□ 0.65
CHRFAM7A-202ENST00000397827 HHATQ5VTY9 493 aa19.11■□□□□ 0.65
CHRFAM7A-202ENST00000397827 MIS12Q9H081 205 aa19.11■□□□□ 0.65
CHRFAM7A-202ENST00000397827 FAM49AQ9H0Q0 323 aaPredicted RBP19.11■□□□□ 0.65
CHRFAM7A-202ENST00000397827 NOD2Q9HC29 1040 aa19.11■□□□□ 0.65
CHRFAM7A-202ENST00000397827 VTA1Q9NP79 307 aa19.11■□□□□ 0.65
CHRFAM7A-202ENST00000397827 PLXNA1Q9UIW2 1896 aa19.11■□□□□ 0.65
CHRFAM7A-202ENST00000397827 DNAH12Q6ZR08 3092 aa19.11■□□□□ 0.65
CHRFAM7A-202ENST00000397827 WDR91A4D1P6 747 aa19.11■□□□□ 0.65
CHRFAM7A-202ENST00000397827 SNAI1O95863 264 aaPredicted RBP19.11■□□□□ 0.65
CHRFAM7A-202ENST00000397827 PDK4Q16654 411 aa19.11■□□□□ 0.65
CHRFAM7A-202ENST00000397827 FAXCQ5TGI0 409 aa19.11■□□□□ 0.65
CHRFAM7A-202ENST00000397827 ADGRD1Q6QNK2 874 aa19.11■□□□□ 0.65
CHRFAM7A-202ENST00000397827 LRRC8CQ8TDW0 803 aa19.11■□□□□ 0.65
CHRFAM7A-202ENST00000397827 FAM172AQ8WUF8 416 aa19.11■□□□□ 0.65
CHRFAM7A-202ENST00000397827 KATNBL1Q9H079 304 aa19.11■□□□□ 0.65
CHRFAM7A-202ENST00000397827 SETD4Q9NVD3 440 aa19.11■□□□□ 0.65
CHRFAM7A-202ENST00000397827 TUBGCP4Q9UGJ1 667 aa19.11■□□□□ 0.65
CHRFAM7A-202ENST00000397827 MSH2P43246 934 aa19.1■□□□□ 0.65
CHRFAM7A-202ENST00000397827 C9orf131Q5VYM1 1079 aa19.1■□□□□ 0.65
CHRFAM7A-202ENST00000397827 OLFML1Q6UWY5 402 aa19.1■□□□□ 0.65
CHRFAM7A-202ENST00000397827 PLD5Q8N7P1 536 aa19.1■□□□□ 0.65
CHRFAM7A-202ENST00000397827 C18orf25Q96B23 403 aaPredicted RBP19.1■□□□□ 0.65
CHRFAM7A-202ENST00000397827 GRAMD1AQ96CP6 724 aa19.1■□□□□ 0.65
CHRFAM7A-202ENST00000397827 IGF2BP3O00425 579 aaKnown RBP eCLIP19.1■□□□□ 0.65
CHRFAM7A-202ENST00000397827 KCNN4O15554 427 aa19.1■□□□□ 0.65
CHRFAM7A-202ENST00000397827 GABBR2O75899 941 aa19.1■□□□□ 0.65
CHRFAM7A-202ENST00000397827 TFE3P19532 575 aaPredicted RBP19.1■□□□□ 0.65
CHRFAM7A-202ENST00000397827 ADRA1DP25100 572 aa19.1■□□□□ 0.65
CHRFAM7A-202ENST00000397827 STIP1P31948 543 aaKnown RBP19.1■□□□□ 0.65
CHRFAM7A-202ENST00000397827 SLC18A1P54219 525 aa19.1■□□□□ 0.65
CHRFAM7A-202ENST00000397827 RASA2Q15283 850 aa19.1■□□□□ 0.65
CHRFAM7A-202ENST00000397827 KYAT1Q16773 422 aa19.1■□□□□ 0.65
CHRFAM7A-202ENST00000397827 RNF43Q68DV7 783 aa19.1■□□□□ 0.65
CHRFAM7A-202ENST00000397827 SMYD5Q6GMV2 418 aa19.1■□□□□ 0.65
CHRFAM7A-202ENST00000397827 GBP7Q8N8V2 638 aaPredicted RBP19.1■□□□□ 0.65
CHRFAM7A-202ENST00000397827 DCAKDQ8WVC6 231 aa19.1■□□□□ 0.65
CHRFAM7A-202ENST00000397827 KHSRPQ92945 711 aaKnown RBP eCLIP19.1■□□□□ 0.65
CHRFAM7A-202ENST00000397827 FAF2Q96CS3 445 aa19.1■□□□□ 0.65
CHRFAM7A-202ENST00000397827 SLC10A4Q96EP9 437 aa19.1■□□□□ 0.65
CHRFAM7A-202ENST00000397827 EIF2AQ9BY44 585 aaKnown RBP19.1■□□□□ 0.65
CHRFAM7A-202ENST00000397827 ZNF408Q9H9D4 720 aa19.1■□□□□ 0.65
CHRFAM7A-202ENST00000397827 PPCSQ9HAB8 311 aa19.1■□□□□ 0.65
CHRFAM7A-202ENST00000397827 RAB6BQ9NRW1 208 aa19.1■□□□□ 0.65
CHRFAM7A-202ENST00000397827 KBTBD13C9JR72 458 aa19.1■□□□□ 0.65
CHRFAM7A-202ENST00000397827 PDHXO00330 501 aa19.1■□□□□ 0.65
CHRFAM7A-202ENST00000397827 ATP6V1G2O95670 118 aa19.1■□□□□ 0.65
CHRFAM7A-202ENST00000397827 SMPD1P17405 629 aa19.1■□□□□ 0.65
CHRFAM7A-202ENST00000397827 EPHX2P34913 555 aa19.1■□□□□ 0.65
CHRFAM7A-202ENST00000397827 GRM5P41594 1212 aa19.1■□□□□ 0.65
CHRFAM7A-202ENST00000397827 TFDP2Q14188 446 aa19.1■□□□□ 0.65
CHRFAM7A-202ENST00000397827 KLHL38Q2WGJ6 581 aa19.1■□□□□ 0.65
CHRFAM7A-202ENST00000397827 PPP6R3Q5H9R7 873 aaPredicted RBP19.1■□□□□ 0.65
CHRFAM7A-202ENST00000397827 C7orf31Q8N865 590 aa19.1■□□□□ 0.65
CHRFAM7A-202ENST00000397827 MZB1Q8WU39 189 aa19.1■□□□□ 0.65
CHRFAM7A-202ENST00000397827 KLHL29Q96CT2 875 aa19.1■□□□□ 0.65
CHRFAM7A-202ENST00000397827 DHRS4Q9BTZ2 278 aa19.1■□□□□ 0.65
CHRFAM7A-202ENST00000397827 CDHR5Q9HBB8 845 aa19.1■□□□□ 0.65
CHRFAM7A-202ENST00000397827 USP29Q9HBJ7 922 aa19.1■□□□□ 0.65
CHRFAM7A-202ENST00000397827 KIAA1257Q9ULG3 409 aa19.1■□□□□ 0.65
CHRFAM7A-202ENST00000397827 STARD13Q9Y3M8 1113 aa19.1■□□□□ 0.65
CHRFAM7A-202ENST00000397827 GTF3C5Q9Y5Q8 519 aaPredicted RBP19.1■□□□□ 0.65
CHRFAM7A-202ENST00000397827 COL1A2P08123 1366 aa19.09■□□□□ 0.65
CHRFAM7A-202ENST00000397827 HOXA11P31270 313 aaPredicted RBP19.09■□□□□ 0.65
CHRFAM7A-202ENST00000397827 YARSP54577 528 aaKnown RBP19.09■□□□□ 0.65
CHRFAM7A-202ENST00000397827 AGGF1Q8N302 714 aaeCLIP19.09■□□□□ 0.65
CHRFAM7A-202ENST00000397827 PQLC3Q8N755 202 aa19.09■□□□□ 0.65
CHRFAM7A-202ENST00000397827 MAGEB5Q9BZ81 275 aa19.09■□□□□ 0.65
CHRFAM7A-202ENST00000397827 PHACTR1Q9C0D0 580 aa19.09■□□□□ 0.65
CHRFAM7A-202ENST00000397827 DPEP3Q9H4B8 488 aa19.09■□□□□ 0.65
CHRFAM7A-202ENST00000397827 RPS6KL1Q9Y6S9 549 aa19.09■□□□□ 0.65
CHRFAM7A-202ENST00000397827 TCRBV9S1A1TA0A576 114 aa19.09■□□□□ 0.65
CHRFAM7A-202ENST00000397827 PAPSS1O43252 624 aaPredicted RBP19.09■□□□□ 0.65
CHRFAM7A-202ENST00000397827 STAU1O95793 577 aaKnown RBP19.09■□□□□ 0.65
CHRFAM7A-202ENST00000397827 NQO1P15559 274 aaKnown RBP19.09■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms