RNA–Protein interactions for RNA: ENST00000397617.7

PTPRD-206, Transcript of protein tyrosine phosphatase, receptor type D, humanhuman

TSL 5 BASIC

Gene PTPRD, Length 8,248 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRD-206ENST00000397617 LRRC4Q9HBW1 653 aa6.11□□□□□ -1.43
PTPRD-206ENST00000397617 TMEM45AQ9NWC5 275 aa6.11□□□□□ -1.43
PTPRD-206ENST00000397617 NOL12Q9UGY1 213 aaKnown RBP eCLIP6.11□□□□□ -1.43
PTPRD-206ENST00000397617 NDUFAB1O14561 156 aa6.11□□□□□ -1.43
PTPRD-206ENST00000397617 GPR32O75388 356 aa6.11□□□□□ -1.43
PTPRD-206ENST00000397617 PRKCHP24723 683 aa6.11□□□□□ -1.43
PTPRD-206ENST00000397617 GGCXP38435 758 aa6.11□□□□□ -1.43
PTPRD-206ENST00000397617 CREMQ03060 361 aa6.11□□□□□ -1.43
PTPRD-206ENST00000397617 CCDC15Q0P6D6 951 aa6.11□□□□□ -1.43
PTPRD-206ENST00000397617 CEP85LQ5SZL2 805 aa6.11□□□□□ -1.43
PTPRD-206ENST00000397617 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP6.11□□□□□ -1.43
PTPRD-206ENST00000397617 ANAPC5Q9UJX4 755 aa6.11□□□□□ -1.43
PTPRD-206ENST00000397617 ZNF148Q9UQR1 794 aa6.11□□□□□ -1.43
PTPRD-206ENST00000397617 TDRD15B5MCY1 1934 aaKnown RBP6.11□□□□□ -1.43
PTPRD-206ENST00000397617 NFICP08651 508 aa6.11□□□□□ -1.43
PTPRD-206ENST00000397617 C6orf222P0C671 652 aaPredicted RBP6.11□□□□□ -1.43
PTPRD-206ENST00000397617 GNL1P36915 607 aaPredicted RBP6.11□□□□□ -1.43
PTPRD-206ENST00000397617 ADCYAP1R1P41586 468 aa6.11□□□□□ -1.43
PTPRD-206ENST00000397617 RIPK1Q13546 671 aa6.11□□□□□ -1.43
PTPRD-206ENST00000397617 TRIM50Q86XT4 487 aa6.11□□□□□ -1.43
PTPRD-206ENST00000397617 XYLT1Q86Y38 959 aa6.11□□□□□ -1.43
PTPRD-206ENST00000397617 PTPN18Q99952 460 aa6.11□□□□□ -1.43
PTPRD-206ENST00000397617 ADAM28Q9UKQ2 775 aa6.11□□□□□ -1.43
PTPRD-206ENST00000397617 CLEC11AQ9Y240 323 aa6.11□□□□□ -1.43
PTPRD-206ENST00000397617 SRGAP2O75044 1071 aa6.1□□□□□ -1.43
PTPRD-206ENST00000397617 PAPSS2O95340 614 aaPredicted RBP6.1□□□□□ -1.43
PTPRD-206ENST00000397617 CST3P01034 146 aaPredicted RBP6.1□□□□□ -1.43
PTPRD-206ENST00000397617 ITGB3P05106 788 aa6.1□□□□□ -1.43
PTPRD-206ENST00000397617 CD9P21926 228 aa6.1□□□□□ -1.43
PTPRD-206ENST00000397617 CXCR3P49682 368 aa6.1□□□□□ -1.43
PTPRD-206ENST00000397617 FAM102AQ5T9C2 384 aaPredicted RBP6.1□□□□□ -1.43
PTPRD-206ENST00000397617 MAP1SQ66K74 1059 aaPredicted RBP6.1□□□□□ -1.43
PTPRD-206ENST00000397617 POTEHQ6S545 545 aa6.1□□□□□ -1.43
PTPRD-206ENST00000397617 TIFABQ6ZNK6 161 aa6.1□□□□□ -1.43
PTPRD-206ENST00000397617 METTL23Q86XA0 190 aa6.1□□□□□ -1.43
PTPRD-206ENST00000397617 TRAF3IP1Q8TDR0 691 aaPredicted RBP6.1□□□□□ -1.43
PTPRD-206ENST00000397617 HDAC11Q96DB2 347 aa6.1□□□□□ -1.43
PTPRD-206ENST00000397617 CPXM1Q96SM3 734 aa6.1□□□□□ -1.43
PTPRD-206ENST00000397617 FAN1Q9Y2M0 1017 aa6.1□□□□□ -1.43
PTPRD-206ENST00000397617 CFAP73A6NFT4 308 aa6.1□□□□□ -1.43
PTPRD-206ENST00000397617 CACNG3O60359 315 aa6.1□□□□□ -1.43
PTPRD-206ENST00000397617 ITGA4P13612 1032 aa6.1□□□□□ -1.43
PTPRD-206ENST00000397617 MFSD7Q6UXD7 560 aa6.1□□□□□ -1.43
PTPRD-206ENST00000397617 TFAP2BQ92481 460 aa6.1□□□□□ -1.43
PTPRD-206ENST00000397617 CDKL2Q92772 493 aa6.1□□□□□ -1.43
PTPRD-206ENST00000397617 ISL2Q96A47 359 aa6.1□□□□□ -1.43
PTPRD-206ENST00000397617 CHMP6Q96FZ7 201 aa6.1□□□□□ -1.43
PTPRD-206ENST00000397617 PSMC3IPQ9P2W1 217 aaPredicted RBP6.1□□□□□ -1.43
PTPRD-206ENST00000397617 BACE2Q9Y5Z0 518 aa6.1□□□□□ -1.43
PTPRD-206ENST00000397617 GMNCA6NCL1 334 aa6.1□□□□□ -1.43
PTPRD-206ENST00000397617 TMEM88BA6NKF7 163 aa6.1□□□□□ -1.43
PTPRD-206ENST00000397617 MIPP30301 263 aa6.1□□□□□ -1.43
PTPRD-206ENST00000397617 KPNA2P52292 529 aaKnown RBP6.1□□□□□ -1.43
PTPRD-206ENST00000397617 NDST1P52848 882 aa6.1□□□□□ -1.43
PTPRD-206ENST00000397617 B3GALNT2Q8NCR0 500 aa6.1□□□□□ -1.43
PTPRD-206ENST00000397617 PPM1EQ8WY54 764 aa6.1□□□□□ -1.43
PTPRD-206ENST00000397617 ATP2A3Q93084 1043 aa6.1□□□□□ -1.43
PTPRD-206ENST00000397617 OLFM3Q96PB7 478 aa6.1□□□□□ -1.43
PTPRD-206ENST00000397617 MAK16Q9BXY0 300 aaKnown RBP6.1□□□□□ -1.43
PTPRD-206ENST00000397617 CREBZFQ9NS37 354 aa6.1□□□□□ -1.43
PTPRD-206ENST00000397617 TAS2R14Q9NYV8 317 aa6.1□□□□□ -1.43
PTPRD-206ENST00000397617 ZNF638Q14966 1978 aaKnown RBP6.1□□□□□ -1.43
PTPRD-206ENST00000397617 A0A0A0MRY4 1105 aa6.1□□□□□ -1.43
PTPRD-206ENST00000397617 TP73O15350 636 aa6.1□□□□□ -1.43
PTPRD-206ENST00000397617 DYNC1LI2O43237 492 aaPredicted RBP6.1□□□□□ -1.43
PTPRD-206ENST00000397617 RIPK2O43353 540 aa6.1□□□□□ -1.43
PTPRD-206ENST00000397617 ZWINTO95229 277 aa6.1□□□□□ -1.43
PTPRD-206ENST00000397617 KRT1P04264 644 aa6.1□□□□□ -1.43
PTPRD-206ENST00000397617 COL6A2P12110 1019 aa6.1□□□□□ -1.43
PTPRD-206ENST00000397617 ADRA1BP35368 520 aa6.1□□□□□ -1.43
PTPRD-206ENST00000397617 GLUD2P49448 558 aa6.1□□□□□ -1.43
PTPRD-206ENST00000397617 RPL10AP62906 217 aaKnown RBP6.1□□□□□ -1.43
PTPRD-206ENST00000397617 UBXN11Q5T124 520 aa6.1□□□□□ -1.43
PTPRD-206ENST00000397617 SCARA3Q6AZY7 606 aa6.1□□□□□ -1.43
PTPRD-206ENST00000397617 FUKQ8N0W3 1084 aa6.1□□□□□ -1.43
PTPRD-206ENST00000397617 ZBTB45Q96K62 511 aaPredicted RBP6.1□□□□□ -1.43
PTPRD-206ENST00000397617 SPATA13Q96N96 652 aa6.1□□□□□ -1.43
PTPRD-206ENST00000397617 QKIQ96PU8 341 aaKnown RBP eCLIP6.1□□□□□ -1.43
PTPRD-206ENST00000397617 TMEM175Q9BSA9 504 aa6.1□□□□□ -1.43
PTPRD-206ENST00000397617 TET1Q8NFU7 2136 aa6.1□□□□□ -1.43
PTPRD-206ENST00000397617 TISP43B9A030 160 aa6.1□□□□□ -1.43
PTPRD-206ENST00000397617 TRAFD1O14545 582 aaPredicted RBP6.1□□□□□ -1.43
PTPRD-206ENST00000397617 CLCN2P51788 898 aa6.1□□□□□ -1.43
PTPRD-206ENST00000397617 UAP1Q16222 522 aaPredicted RBP6.1□□□□□ -1.43
PTPRD-206ENST00000397617 LRRC34Q8IZ02 419 aa6.1□□□□□ -1.43
PTPRD-206ENST00000397617 VPS52Q8N1B4 723 aa6.1□□□□□ -1.43
PTPRD-206ENST00000397617 MPP5Q8N3R9 675 aa6.1□□□□□ -1.43
PTPRD-206ENST00000397617 ZNF599Q96NL3 588 aa6.1□□□□□ -1.43
PTPRD-206ENST00000397617 SERPINB11Q96P15 392 aa6.1□□□□□ -1.43
PTPRD-206ENST00000397617 HAPLN2Q9GZV7 340 aa6.1□□□□□ -1.43
PTPRD-206ENST00000397617 CDC42EP4Q9H3Q1 356 aaKnown RBP6.1□□□□□ -1.43
PTPRD-206ENST00000397617 BFARQ9NZS9 450 aa6.1□□□□□ -1.43
PTPRD-206ENST00000397617 FRMD4AQ9P2Q2 1039 aaPredicted RBP6.1□□□□□ -1.43
PTPRD-206ENST00000397617 COL4A6Q14031 1691 aa6.1□□□□□ -1.43
PTPRD-206ENST00000397617 CABIN1Q9Y6J0 2220 aa6.1□□□□□ -1.43
PTPRD-206ENST00000397617 IQANK1A0A1B0GTG1 560 aa6.1□□□□□ -1.43
PTPRD-206ENST00000397617 FAM47DPA6NHR8 397 aa6.1□□□□□ -1.43
PTPRD-206ENST00000397617 RTN3O95197 1032 aaPredicted RBP6.1□□□□□ -1.43
PTPRD-206ENST00000397617 PFKMP08237 780 aa6.1□□□□□ -1.43
PTPRD-206ENST00000397617 PLTPP55058 493 aa6.1□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 77 ms