RNA–Protein interactions for RNA: ENST00000397404.5

TSPAN4-204, Transcript of tetraspanin 4, humanhuman

APPRIS P1 TSL 5 BASIC

Gene TSPAN4, Length 1,462 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-204ENST00000397404 OR4Q2P0C623 313 aa19.9■□□□□ 0.78
TSPAN4-204ENST00000397404 PTPN7P35236 360 aa19.9■□□□□ 0.78
TSPAN4-204ENST00000397404 RNASE9P60153 205 aaKnown RBP19.9■□□□□ 0.78
TSPAN4-204ENST00000397404 OGDHQ02218 1023 aa19.9■□□□□ 0.78
TSPAN4-204ENST00000397404 CCDC142Q17RM4 750 aa19.9■□□□□ 0.78
TSPAN4-204ENST00000397404 CCDC14Q49A88 953 aa19.9■□□□□ 0.78
TSPAN4-204ENST00000397404 CCDC70Q6NSX1 233 aa19.9■□□□□ 0.78
TSPAN4-204ENST00000397404 PRSS55Q6UWB4 352 aaPredicted RBP19.9■□□□□ 0.78
TSPAN4-204ENST00000397404 MAP7D3Q8IWC1 876 aa19.9■□□□□ 0.78
TSPAN4-204ENST00000397404 SCN4BQ8IWT1 228 aa19.9■□□□□ 0.78
TSPAN4-204ENST00000397404 PRDM16Q9HAZ2 1276 aa19.9■□□□□ 0.78
TSPAN4-204ENST00000397404 ZNF487B1APH4 448 aa19.89■□□□□ 0.77
TSPAN4-204ENST00000397404 MDM4O15151 490 aa19.89■□□□□ 0.77
TSPAN4-204ENST00000397404 CEP104O60308 925 aa19.89■□□□□ 0.77
TSPAN4-204ENST00000397404 LPXNO60711 386 aa19.89■□□□□ 0.77
TSPAN4-204ENST00000397404 ADH1AP07327 375 aa19.89■□□□□ 0.77
TSPAN4-204ENST00000397404 TUBBP07437 444 aa19.89■□□□□ 0.77
TSPAN4-204ENST00000397404 ELF1P32519 619 aa19.89■□□□□ 0.77
TSPAN4-204ENST00000397404 PPP3CCP48454 512 aa19.89■□□□□ 0.77
TSPAN4-204ENST00000397404 ZNF135P52742 658 aaPredicted RBP19.89■□□□□ 0.77
TSPAN4-204ENST00000397404 CACNA2D1P54289 1103 aa19.89■□□□□ 0.77
TSPAN4-204ENST00000397404 MGAT5BQ3V5L5 792 aa19.89■□□□□ 0.77
TSPAN4-204ENST00000397404 COL13A1Q5TAT6 717 aaPredicted RBP19.89■□□□□ 0.77
TSPAN4-204ENST00000397404 RNF19BQ6ZMZ0 732 aa19.89■□□□□ 0.77
TSPAN4-204ENST00000397404 ZNF276Q8N554 614 aa19.89■□□□□ 0.77
TSPAN4-204ENST00000397404 EMC1Q8N766 993 aa19.89■□□□□ 0.77
TSPAN4-204ENST00000397404 KLHL23Q8NBE8 558 aa19.89■□□□□ 0.77
TSPAN4-204ENST00000397404 PDZD8Q8NEN9 1154 aa19.89■□□□□ 0.77
TSPAN4-204ENST00000397404 COG1Q8WTW3 980 aa19.89■□□□□ 0.77
TSPAN4-204ENST00000397404 HOMER3Q9NSC5 361 aa19.89■□□□□ 0.77
TSPAN4-204ENST00000397404 TMEM30AQ9NV96 361 aa19.89■□□□□ 0.77
TSPAN4-204ENST00000397404 MTUS1Q9ULD2 1270 aa19.89■□□□□ 0.77
TSPAN4-204ENST00000397404 USP18Q9UMW8 372 aa19.89■□□□□ 0.77
TSPAN4-204ENST00000397404 USTQ9Y2C2 406 aa19.89■□□□□ 0.77
TSPAN4-204ENST00000397404 SRGAP2O75044 1071 aa19.88■□□□□ 0.77
TSPAN4-204ENST00000397404 USP17L7P0C7H9 530 aa19.88■□□□□ 0.77
TSPAN4-204ENST00000397404 GBP1P32455 592 aa19.88■□□□□ 0.77
TSPAN4-204ENST00000397404 CTNNB1P35222 781 aa19.88■□□□□ 0.77
TSPAN4-204ENST00000397404 SSR1P43307 286 aaKnown RBP19.88■□□□□ 0.77
TSPAN4-204ENST00000397404 MAGEA10P43363 369 aaPredicted RBP19.88■□□□□ 0.77
TSPAN4-204ENST00000397404 ARPP19P56211 112 aa19.88■□□□□ 0.77
TSPAN4-204ENST00000397404 SLC25A11Q02978 314 aaKnown RBP19.88■□□□□ 0.77
TSPAN4-204ENST00000397404 SMC1AQ14683 1233 aaKnown RBP19.88■□□□□ 0.77
TSPAN4-204ENST00000397404 ACBD5Q5T8D3 534 aaPredicted RBP19.88■□□□□ 0.77
TSPAN4-204ENST00000397404 RSPO2Q6UXX9 243 aaPredicted RBP19.88■□□□□ 0.77
TSPAN4-204ENST00000397404 BNIPLQ7Z465 357 aa19.88■□□□□ 0.77
TSPAN4-204ENST00000397404 TADA2BQ86TJ2 420 aa19.88■□□□□ 0.77
TSPAN4-204ENST00000397404 TCEAL8Q8IYN2 117 aa19.88■□□□□ 0.77
TSPAN4-204ENST00000397404 ATAD1Q8NBU5 361 aa19.88■□□□□ 0.77
TSPAN4-204ENST00000397404 B3GALT6Q96L58 329 aa19.88■□□□□ 0.77
TSPAN4-204ENST00000397404 RUNDC3BQ96NL0 473 aa19.88■□□□□ 0.77
TSPAN4-204ENST00000397404 TTLL2Q9BWV7 592 aa19.88■□□□□ 0.77
TSPAN4-204ENST00000397404 CARD6Q9BX69 1037 aa19.88■□□□□ 0.77
TSPAN4-204ENST00000397404 OLA1Q9NTK5 396 aaKnown RBP19.88■□□□□ 0.77
TSPAN4-204ENST00000397404 CLIC5Q9NZA1 410 aa19.88■□□□□ 0.77
TSPAN4-204ENST00000397404 COL4A4P53420 1690 aaPredicted RBP19.88■□□□□ 0.77
TSPAN4-204ENST00000397404 FAM170AA1A519 330 aa19.87■□□□□ 0.77
TSPAN4-204ENST00000397404 LINC01553A4QN01 128 aa19.87■□□□□ 0.77
TSPAN4-204ENST00000397404 PIK3R2O00459 728 aa19.87■□□□□ 0.77
TSPAN4-204ENST00000397404 GJB6O95452 261 aa19.87■□□□□ 0.77
TSPAN4-204ENST00000397404 CSH1P0DML2 217 aa19.87■□□□□ 0.77
TSPAN4-204ENST00000397404 CSH2P0DML3 217 aa19.87■□□□□ 0.77
TSPAN4-204ENST00000397404 YWHAQP27348 245 aa19.87■□□□□ 0.77
TSPAN4-204ENST00000397404 CXCR5P32302 372 aa19.87■□□□□ 0.77
TSPAN4-204ENST00000397404 ALDH1A3P47895 512 aa19.87■□□□□ 0.77
TSPAN4-204ENST00000397404 DUSP4Q13115 394 aa19.87■□□□□ 0.77
TSPAN4-204ENST00000397404 PDK2Q15119 407 aa19.87■□□□□ 0.77
TSPAN4-204ENST00000397404 DCAF6Q58WW2 860 aa19.87■□□□□ 0.77
TSPAN4-204ENST00000397404 SND1Q7KZF4 910 aaKnown RBP eCLIP19.87■□□□□ 0.775e-7■■■□□ 16.2
TSPAN4-204ENST00000397404 DEFB106AQ8N104 65 aa19.87■□□□□ 0.77
TSPAN4-204ENST00000397404 FAM172AQ8WUF8 416 aa19.87■□□□□ 0.77
TSPAN4-204ENST00000397404 ALG3Q92685 438 aa19.87■□□□□ 0.77
TSPAN4-204ENST00000397404 KRT35Q92764 455 aa19.87■□□□□ 0.77
TSPAN4-204ENST00000397404 PIWIL1Q96J94 861 aaKnown RBP19.87■□□□□ 0.77
TSPAN4-204ENST00000397404 SLITRK1Q96PX8 696 aa19.87■□□□□ 0.77
TSPAN4-204ENST00000397404 NPY6RQ99463 290 aa19.87■□□□□ 0.77
TSPAN4-204ENST00000397404 TLR8Q9NR97 1041 aaKnown RBP19.87■□□□□ 0.77
TSPAN4-204ENST00000397404 DPP7Q9UHL4 492 aa19.87■□□□□ 0.77
TSPAN4-204ENST00000397404 ASB3Q9Y575 518 aa19.87■□□□□ 0.77
TSPAN4-204ENST00000397404 MIPP30301 263 aa19.86■□□□□ 0.77
TSPAN4-204ENST00000397404 RDXP35241 583 aaKnown RBP19.86■□□□□ 0.77
TSPAN4-204ENST00000397404 NNTQ13423 1086 aa19.86■□□□□ 0.77
TSPAN4-204ENST00000397404 VEPH1Q14D04 833 aa19.86■□□□□ 0.77
TSPAN4-204ENST00000397404 RAB30Q15771 203 aa19.86■□□□□ 0.77
TSPAN4-204ENST00000397404 GLE1Q53GS7 698 aaKnown RBP19.86■□□□□ 0.77
TSPAN4-204ENST00000397404 CCDC149Q6ZUS6 474 aa19.86■□□□□ 0.77
TSPAN4-204ENST00000397404 GPRIN1Q7Z2K8 1008 aa19.86■□□□□ 0.77
TSPAN4-204ENST00000397404 TMC7Q7Z402 723 aa19.86■□□□□ 0.77
TSPAN4-204ENST00000397404 SPATA4Q8NEY3 305 aa19.86■□□□□ 0.77
TSPAN4-204ENST00000397404 CLEC4CQ8WTT0 213 aa19.86■□□□□ 0.77
TSPAN4-204ENST00000397404 CAPZA3Q96KX2 299 aa19.86■□□□□ 0.77
TSPAN4-204ENST00000397404 CFAP57Q96MR6 1250 aa19.86■□□□□ 0.77
TSPAN4-204ENST00000397404 PGLYRP2Q96PD5 576 aa19.86■□□□□ 0.77
TSPAN4-204ENST00000397404 TGS1Q96RS0 853 aaKnown RBP19.86■□□□□ 0.77
TSPAN4-204ENST00000397404 PSMB7Q99436 277 aa19.86■□□□□ 0.77
TSPAN4-204ENST00000397404 SEPT5Q99719 369 aaPredicted RBP19.86■□□□□ 0.77
TSPAN4-204ENST00000397404 RHOBTB2Q9BYZ6 727 aa19.86■□□□□ 0.77
TSPAN4-204ENST00000397404 UXTQ9UBK9 157 aaPredicted RBP19.86■□□□□ 0.77
TSPAN4-204ENST00000397404 YJEFN3A6XGL0 299 aa19.86■□□□□ 0.77
TSPAN4-204ENST00000397404 E7ENQ6 273 aa19.86■□□□□ 0.77
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms