RNA–Protein interactions for RNA: ENST00000396682.6

RPA3-202, Transcript of replication protein A3, humanhuman

APPRIS P1 TSL 3 BASIC

Gene RPA3, Length 847 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPA3-202ENST00000396682 ARMCX6Q7L4S7 300 aa14.08□□□□□ -0.16
RPA3-202ENST00000396682 TMEFF1Q8IYR6 380 aa14.08□□□□□ -0.16
RPA3-202ENST00000396682 GRAMD1CQ8IYS0 662 aa14.08□□□□□ -0.16
RPA3-202ENST00000396682 NAT16Q8N8M0 369 aa14.08□□□□□ -0.16
RPA3-202ENST00000396682 PARD3BQ8TEW8 1205 aa14.08□□□□□ -0.16
RPA3-202ENST00000396682 WHAMMQ8TF30 809 aa14.08□□□□□ -0.16
RPA3-202ENST00000396682 ZNF396Q96N95 335 aaPredicted RBP14.08□□□□□ -0.16
RPA3-202ENST00000396682 MAGEF1Q9HAY2 307 aa14.08□□□□□ -0.16
RPA3-202ENST00000396682 DMAP1Q9NPF5 467 aaPredicted RBP14.08□□□□□ -0.16
RPA3-202ENST00000396682 TMEM74BQ9NUR3 256 aa14.08□□□□□ -0.16
RPA3-202ENST00000396682 GMIPQ9P107 970 aa14.08□□□□□ -0.16
RPA3-202ENST00000396682 CGNQ9P2M7 1197 aaKnown RBP14.08□□□□□ -0.16
RPA3-202ENST00000396682 HMGXB4Q9UGU5 601 aa14.08□□□□□ -0.16
RPA3-202ENST00000396682 AKAP13Q12802 2813 aa14.07□□□□□ -0.16
RPA3-202ENST00000396682 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP14.07□□□□□ -0.16
RPA3-202ENST00000396682 PVALEFA0A1B0GWK0 134 aa14.07□□□□□ -0.16
RPA3-202ENST00000396682 TCRBV21S2A2A0A5A6 115 aa14.07□□□□□ -0.16
RPA3-202ENST00000396682 PALM2-AKAP2B1ALY0 433 aaPredicted RBP14.07□□□□□ -0.16
RPA3-202ENST00000396682 TRIM24O15164 1050 aa14.07□□□□□ -0.16
RPA3-202ENST00000396682 GREM1O60565 184 aa14.07□□□□□ -0.16
RPA3-202ENST00000396682 PHACTR2O75167 634 aa14.07□□□□□ -0.16
RPA3-202ENST00000396682 TULP3O75386 442 aa14.07□□□□□ -0.16
RPA3-202ENST00000396682 BEST1O76090 585 aa14.07□□□□□ -0.16
RPA3-202ENST00000396682 TOP3BO95985 862 aaKnown RBP14.07□□□□□ -0.16
RPA3-202ENST00000396682 CCDC130P13994 396 aa14.07□□□□□ -0.16
RPA3-202ENST00000396682 AFMP43652 599 aa14.07□□□□□ -0.16
RPA3-202ENST00000396682 DLG4P78352 724 aa14.07□□□□□ -0.16
RPA3-202ENST00000396682 GAD2Q05329 585 aa14.07□□□□□ -0.16
RPA3-202ENST00000396682 ORC1Q13415 861 aa14.07□□□□□ -0.16
RPA3-202ENST00000396682 BIRC3Q13489 604 aa14.07□□□□□ -0.16
RPA3-202ENST00000396682 NCOA4Q13772 614 aa14.07□□□□□ -0.16
RPA3-202ENST00000396682 ZNF699Q32M78 642 aa14.07□□□□□ -0.16
RPA3-202ENST00000396682 ZNF667Q5HYK9 610 aa14.07□□□□□ -0.16
RPA3-202ENST00000396682 FOXD4L5Q5VV16 416 aaPredicted RBP14.07□□□□□ -0.16
RPA3-202ENST00000396682 LPCAT2Q7L5N7 544 aa14.07□□□□□ -0.16
RPA3-202ENST00000396682 ACOT1Q86TX2 421 aa14.07□□□□□ -0.16
RPA3-202ENST00000396682 TMEM25Q86YD3 366 aa14.07□□□□□ -0.16
RPA3-202ENST00000396682 MIB1Q86YT6 1006 aa14.07□□□□□ -0.16
RPA3-202ENST00000396682 KIAA0895Q8NCT3 520 aa14.07□□□□□ -0.16
RPA3-202ENST00000396682 HMGB4Q8WW32 186 aa14.07□□□□□ -0.16
RPA3-202ENST00000396682 FOXD4L4Q8WXT5 416 aaPredicted RBP14.07□□□□□ -0.16
RPA3-202ENST00000396682 OTUB2Q96DC9 234 aa14.07□□□□□ -0.16
RPA3-202ENST00000396682 SMARCD1Q96GM5 515 aa14.07□□□□□ -0.16
RPA3-202ENST00000396682 SMOQ99835 787 aa14.07□□□□□ -0.16
RPA3-202ENST00000396682 DUSP9Q99956 384 aaKnown RBP14.07□□□□□ -0.16
RPA3-202ENST00000396682 MED10Q9BTT4 135 aa14.07□□□□□ -0.16
RPA3-202ENST00000396682 POLMQ9NP87 494 aaPredicted RBP14.07□□□□□ -0.16
RPA3-202ENST00000396682 KRT82Q9NSB4 513 aa14.07□□□□□ -0.16
RPA3-202ENST00000396682 EVLQ9UI08 416 aaPredicted RBP14.07□□□□□ -0.16
RPA3-202ENST00000396682 CIZ1Q9ULV3 898 aaPredicted RBP14.07□□□□□ -0.16
RPA3-202ENST00000396682 C1QTNF9BB2RNN3 333 aa14.06□□□□□ -0.16
RPA3-202ENST00000396682 KLRC4O43908 158 aa14.06□□□□□ -0.16
RPA3-202ENST00000396682 AP1G2O75843 785 aa14.06□□□□□ -0.16
RPA3-202ENST00000396682 C1QTNF9P0C862 333 aa14.06□□□□□ -0.16
RPA3-202ENST00000396682 SPINK2P20155 84 aa14.06□□□□□ -0.16
RPA3-202ENST00000396682 CSRP1P21291 193 aaKnown RBP14.06□□□□□ -0.16
RPA3-202ENST00000396682 STK4Q13043 487 aa14.06□□□□□ -0.16
RPA3-202ENST00000396682 FOXD4L6Q3SYB3 417 aaPredicted RBP14.06□□□□□ -0.16
RPA3-202ENST00000396682 TRIM61Q5EBN2 209 aa14.06□□□□□ -0.16
RPA3-202ENST00000396682 RESP18Q5W5W9 173 aa14.06□□□□□ -0.16
RPA3-202ENST00000396682 FOXD4L3Q6VB84 417 aaPredicted RBP14.06□□□□□ -0.16
RPA3-202ENST00000396682 TNIP3Q96KP6 325 aa14.06□□□□□ -0.16
RPA3-202ENST00000396682 SPACA7Q96KW9 195 aa14.06□□□□□ -0.16
RPA3-202ENST00000396682 TMEM121BQ9BXQ6 578 aaPredicted RBP14.06□□□□□ -0.16
RPA3-202ENST00000396682 CSNK1G1Q9HCP0 422 aa14.06□□□□□ -0.16
RPA3-202ENST00000396682 SPHK2Q9NRA0 654 aa14.06□□□□□ -0.16
RPA3-202ENST00000396682 DMAC2Q9NW81 257 aa14.06□□□□□ -0.16
RPA3-202ENST00000396682 BCCIPQ9P287 314 aaKnown RBP eCLIP14.06□□□□□ -0.16
RPA3-202ENST00000396682 PCDHA7Q9UN72 937 aa14.06□□□□□ -0.16
RPA3-202ENST00000396682 SH3BP1Q9Y3L3 701 aa14.06□□□□□ -0.16
RPA3-202ENST00000396682 ATP8B3O60423 1300 aa14.06□□□□□ -0.16
RPA3-202ENST00000396682 ATXN2Q99700 1313 aaKnown RBP14.06□□□□□ -0.16
RPA3-202ENST00000396682 FAM208BQ5VWN6 2430 aa14.05□□□□□ -0.16
RPA3-202ENST00000396682 TBC1D3BA6NDS4 549 aa14.05□□□□□ -0.16
RPA3-202ENST00000396682 TBX18O95935 607 aa14.05□□□□□ -0.16
RPA3-202ENST00000396682 PROS1P07225 676 aa14.05□□□□□ -0.16
RPA3-202ENST00000396682 IRF1P10914 325 aa14.05□□□□□ -0.16
RPA3-202ENST00000396682 CEACAM1P13688 526 aa14.05□□□□□ -0.16
RPA3-202ENST00000396682 GABRG2P18507 467 aa14.05□□□□□ -0.16
RPA3-202ENST00000396682 ITPKAP23677 461 aa14.05□□□□□ -0.16
RPA3-202ENST00000396682 AP3M2P53677 418 aa14.05□□□□□ -0.16
RPA3-202ENST00000396682 FOXC1Q12948 553 aa14.05□□□□□ -0.16
RPA3-202ENST00000396682 ANO4Q32M45 955 aa14.05□□□□□ -0.16
RPA3-202ENST00000396682 UAP1L1Q3KQV9 507 aa14.05□□□□□ -0.16
RPA3-202ENST00000396682 C10orf76Q5T2E6 689 aa14.05□□□□□ -0.16
RPA3-202ENST00000396682 PEAR1Q5VY43 1037 aaPredicted RBP14.05□□□□□ -0.16
RPA3-202ENST00000396682 GPRIN1Q7Z2K8 1008 aa14.05□□□□□ -0.16
RPA3-202ENST00000396682 SYT12Q8IV01 421 aa14.05□□□□□ -0.16
RPA3-202ENST00000396682 ZNF513Q8N8E2 541 aaPredicted RBP14.05□□□□□ -0.16
RPA3-202ENST00000396682 C12orf29Q8N999 325 aa14.05□□□□□ -0.16
RPA3-202ENST00000396682 TERB1Q8NA31 727 aa14.05□□□□□ -0.16
RPA3-202ENST00000396682 DEFB124Q8NES8 71 aa14.05□□□□□ -0.16
RPA3-202ENST00000396682 SLC2A14Q8TDB8 520 aa14.05□□□□□ -0.16
RPA3-202ENST00000396682 TMEM174Q8WUU8 243 aa14.05□□□□□ -0.16
RPA3-202ENST00000396682 KCTD10Q9H3F6 313 aa14.05□□□□□ -0.16
RPA3-202ENST00000396682 CD248Q9HCU0 757 aa14.05□□□□□ -0.16
RPA3-202ENST00000396682 COMMD8Q9NX08 183 aa14.05□□□□□ -0.16
RPA3-202ENST00000396682 OSER1Q9NX31 292 aa14.05□□□□□ -0.16
RPA3-202ENST00000396682 DEC1Q9P2X7 70 aa14.05□□□□□ -0.16
RPA3-202ENST00000396682 PILRBQ9UKJ0 227 aa14.05□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms