RNA–Protein interactions for RNA: ENST00000396581.5

TRIM40-207, Transcript of tripartite motif containing 40, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene TRIM40, Length 2,086 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM40-207ENST00000396581 ZC3H18Q86VM9 953 aaKnown RBP13.87□□□□□ -0.19
TRIM40-207ENST00000396581 SESTD1Q86VW0 696 aa13.87□□□□□ -0.19
TRIM40-207ENST00000396581 MYLK4Q86YV6 388 aaPredicted RBP13.87□□□□□ -0.19
TRIM40-207ENST00000396581 KIAA0319LQ8IZA0 1049 aa13.87□□□□□ -0.19
TRIM40-207ENST00000396581 PDCD7Q8N8D1 485 aaKnown RBP13.87□□□□□ -0.19
TRIM40-207ENST00000396581 RAB3IL1Q8TBN0 382 aa13.87□□□□□ -0.19
TRIM40-207ENST00000396581 TTC17Q96AE7 1141 aa13.87□□□□□ -0.19
TRIM40-207ENST00000396581 MSTO1Q9BUK6 570 aa13.87□□□□□ -0.19
TRIM40-207ENST00000396581 IMPG2Q9BZV3 1241 aa13.87□□□□□ -0.19
TRIM40-207ENST00000396581 PORCNQ9H237 461 aa13.87□□□□□ -0.19
TRIM40-207ENST00000396581 C1orf21Q9H246 121 aa13.87□□□□□ -0.19
TRIM40-207ENST00000396581 TMEM134Q9H6X4 195 aa13.87□□□□□ -0.19
TRIM40-207ENST00000396581 METTL5Q9NRN9 209 aaKnown RBP13.87□□□□□ -0.19
TRIM40-207ENST00000396581 RBPJLQ9UBG7 517 aa13.87□□□□□ -0.19
TRIM40-207ENST00000396581 CHMP2BQ9UQN3 213 aa13.87□□□□□ -0.19
TRIM40-207ENST00000396581 KBTBD13C9JR72 458 aa13.87□□□□□ -0.19
TRIM40-207ENST00000396581 TM7SF2O76062 418 aa13.87□□□□□ -0.19
TRIM40-207ENST00000396581 SLC25A27O95847 323 aa13.87□□□□□ -0.19
TRIM40-207ENST00000396581 INHBAP08476 426 aa13.87□□□□□ -0.19
TRIM40-207ENST00000396581 PSMA2P25787 234 aa13.87□□□□□ -0.19
TRIM40-207ENST00000396581 STIP1P31948 543 aaKnown RBP13.87□□□□□ -0.19
TRIM40-207ENST00000396581 ARL2P36404 184 aa13.87□□□□□ -0.19
TRIM40-207ENST00000396581 ACTR3P61158 418 aa13.87□□□□□ -0.19
TRIM40-207ENST00000396581 DYNLT1P63172 113 aa13.87□□□□□ -0.19
TRIM40-207ENST00000396581 HADHQ16836 314 aaKnown RBP13.87□□□□□ -0.19
TRIM40-207ENST00000396581 TTC39BQ5VTQ0 682 aaPredicted RBP13.87□□□□□ -0.19
TRIM40-207ENST00000396581 CDHR3Q6ZTQ4 885 aa13.87□□□□□ -0.19
TRIM40-207ENST00000396581 ALYREFQ86V81 257 aaKnown RBP13.87□□□□□ -0.19
TRIM40-207ENST00000396581 SLC26A11Q86WA9 606 aa13.87□□□□□ -0.19
TRIM40-207ENST00000396581 TREML1Q86YW5 311 aa13.87□□□□□ -0.19
TRIM40-207ENST00000396581 WDR49Q8IV35 697 aa13.87□□□□□ -0.19
TRIM40-207ENST00000396581 BRSK2Q8IWQ3 736 aa13.87□□□□□ -0.19
TRIM40-207ENST00000396581 TFAP2BQ92481 460 aa13.87□□□□□ -0.19
TRIM40-207ENST00000396581 SRPK1Q96SB4 655 aaKnown RBP13.87□□□□□ -0.19
TRIM40-207ENST00000396581 LHX5Q9H2C1 402 aa13.87□□□□□ -0.19
TRIM40-207ENST00000396581 DHX33Q9H6R0 707 aaKnown RBP13.87□□□□□ -0.19
TRIM40-207ENST00000396581 GPAMQ9HCL2 828 aa13.87□□□□□ -0.19
TRIM40-207ENST00000396581 TXNRD2Q9NNW7 524 aa13.87□□□□□ -0.19
TRIM40-207ENST00000396581 CISHQ9NSE2 258 aa13.87□□□□□ -0.19
TRIM40-207ENST00000396581 SIRPGQ9P1W8 387 aa13.87□□□□□ -0.19
TRIM40-207ENST00000396581 PLLPQ9Y342 182 aa13.87□□□□□ -0.19
TRIM40-207ENST00000396581 TELO2Q9Y4R8 837 aa13.87□□□□□ -0.19
TRIM40-207ENST00000396581 WASF2Q9Y6W5 498 aa13.87□□□□□ -0.19
TRIM40-207ENST00000396581 C2orf71A6NGG8 1288 aa13.86□□□□□ -0.19
TRIM40-207ENST00000396581 SPATA31C2B4DYI2 1134 aa13.86□□□□□ -0.19
TRIM40-207ENST00000396581 CHADO15335 359 aa13.86□□□□□ -0.19
TRIM40-207ENST00000396581 FAM189A1O60320 539 aa13.86□□□□□ -0.19
TRIM40-207ENST00000396581 ENDOD1O94919 500 aa13.86□□□□□ -0.19
TRIM40-207ENST00000396581 ITGBL1O95965 494 aaPredicted RBP13.86□□□□□ -0.19
TRIM40-207ENST00000396581 EDN1P05305 212 aa13.86□□□□□ -0.19
TRIM40-207ENST00000396581 OSBPP22059 807 aa13.86□□□□□ -0.19
TRIM40-207ENST00000396581 CRABP2P29373 138 aa13.86□□□□□ -0.19
TRIM40-207ENST00000396581 CNTN2Q02246 1040 aa13.86□□□□□ -0.19
TRIM40-207ENST00000396581 TBCCQ15814 346 aa13.86□□□□□ -0.19
TRIM40-207ENST00000396581 STXBP2Q15833 593 aa13.86□□□□□ -0.19
TRIM40-207ENST00000396581 PTPN20Q4JDL3 420 aa13.86□□□□□ -0.19
TRIM40-207ENST00000396581 TEX44Q53QW1 395 aa13.86□□□□□ -0.19
TRIM40-207ENST00000396581 ADGRG6Q86SQ4 1221 aa13.86□□□□□ -0.19
TRIM40-207ENST00000396581 RBM15BQ8NDT2 890 aaKnown RBP13.86□□□□□ -0.19
TRIM40-207ENST00000396581 DTX3LQ8TDB6 740 aa13.86□□□□□ -0.19
TRIM40-207ENST00000396581 AZIN2Q96A70 460 aa13.86□□□□□ -0.19
TRIM40-207ENST00000396581 TARS2Q9BW92 718 aaKnown RBP13.86□□□□□ -0.19
TRIM40-207ENST00000396581 FRMD8Q9BZ67 464 aaPredicted RBP13.86□□□□□ -0.19
TRIM40-207ENST00000396581 SLC9A2Q9UBY0 812 aa13.86□□□□□ -0.19
TRIM40-207ENST00000396581 IKBKGQ9Y6K9 419 aa13.86□□□□□ -0.19
TRIM40-207ENST00000396581 B2RBV5 119 aa13.86□□□□□ -0.19
TRIM40-207ENST00000396581 K7ERI5 159 aa13.86□□□□□ -0.19
TRIM40-207ENST00000396581 WEE2P0C1S8 567 aa13.86□□□□□ -0.19
TRIM40-207ENST00000396581 KRT3P12035 628 aa13.86□□□□□ -0.19
TRIM40-207ENST00000396581 ANPEPP15144 967 aa13.86□□□□□ -0.19
TRIM40-207ENST00000396581 PRKCHP24723 683 aa13.86□□□□□ -0.19
TRIM40-207ENST00000396581 EIF3EP60228 445 aaKnown RBP13.86□□□□□ -0.19
TRIM40-207ENST00000396581 ACTR2P61160 394 aa13.86□□□□□ -0.19
TRIM40-207ENST00000396581 ACAP1Q15027 740 aa13.86□□□□□ -0.19
TRIM40-207ENST00000396581 SMTNL2Q2TAL5 461 aa13.86□□□□□ -0.19
TRIM40-207ENST00000396581 DNAL1Q4LDG9 190 aa13.86□□□□□ -0.19
TRIM40-207ENST00000396581 CYP4A22Q5TCH4 519 aa13.86□□□□□ -0.19
TRIM40-207ENST00000396581 WDR78Q5VTH9 848 aa13.86□□□□□ -0.19
TRIM40-207ENST00000396581 KYAT3Q6YP21 454 aaKnown RBP13.86□□□□□ -0.19
TRIM40-207ENST00000396581 NCAPG2Q86XI2 1143 aa13.86□□□□□ -0.19
TRIM40-207ENST00000396581 SCUBE1Q8IWY4 988 aa13.86□□□□□ -0.19
TRIM40-207ENST00000396581 FAM71DQ8N9W8 422 aa13.86□□□□□ -0.19
TRIM40-207ENST00000396581 JOSD2Q8TAC2 188 aa13.86□□□□□ -0.19
TRIM40-207ENST00000396581 CCDC106Q9BWC9 280 aa13.86□□□□□ -0.19
TRIM40-207ENST00000396581 NIF3L1Q9GZT8 377 aa13.86□□□□□ -0.19
TRIM40-207ENST00000396581 WWP1Q9H0M0 922 aa13.86□□□□□ -0.19
TRIM40-207ENST00000396581 ZWILCHQ9H900 591 aa13.86□□□□□ -0.19
TRIM40-207ENST00000396581 JPH1Q9HDC5 661 aaPredicted RBP13.86□□□□□ -0.19
TRIM40-207ENST00000396581 ETAA1Q9NY74 926 aa13.86□□□□□ -0.19
TRIM40-207ENST00000396581 ARMCX1Q9P291 453 aa13.86□□□□□ -0.19
TRIM40-207ENST00000396581 TAGLN3Q9UI15 199 aa13.86□□□□□ -0.19
TRIM40-207ENST00000396581 TTLL3Q9Y4R7 772 aa13.86□□□□□ -0.19
TRIM40-207ENST00000396581 COPEO14579 308 aa13.85□□□□□ -0.19
TRIM40-207ENST00000396581 SNNO75324 88 aaPredicted RBP13.85□□□□□ -0.19
TRIM40-207ENST00000396581 CD48P09326 243 aa13.85□□□□□ -0.19
TRIM40-207ENST00000396581 RBP3P10745 1247 aa13.85□□□□□ -0.19
TRIM40-207ENST00000396581 EDNRBP24530 442 aa13.85□□□□□ -0.19
TRIM40-207ENST00000396581 POLR2BP30876 1174 aaKnown RBP13.85□□□□□ -0.19
TRIM40-207ENST00000396581 ICAM3P32942 547 aa13.85□□□□□ -0.19
TRIM40-207ENST00000396581 BASP1P80723 227 aaKnown RBP13.85□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 41.7 ms