RNA–Protein interactions for RNA: ENST00000396578.7

COL4A3-202, Transcript of collagen type IV alpha 3 chain, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COL4A3, Length 8,097 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A3-202ENST00000396578 YWHAZP63104 245 aaKnown RBP14.41□□□□□ -0.1
COL4A3-202ENST00000396578 DGUOKQ16854 277 aa14.41□□□□□ -0.1
COL4A3-202ENST00000396578 MICALL2Q8IY33 904 aa14.41□□□□□ -0.1
COL4A3-202ENST00000396578 NIF3L1Q9GZT8 377 aa14.41□□□□□ -0.1
COL4A3-202ENST00000396578 CHST12Q9NRB3 414 aa14.41□□□□□ -0.1
COL4A3-202ENST00000396578 NCKIPSDQ9NZQ3 722 aa14.41□□□□□ -0.1
COL4A3-202ENST00000396578 SLC25A13Q9UJS0 675 aa14.41□□□□□ -0.1
COL4A3-202ENST00000396578 PNPLA7Q6ZV29 1317 aa14.41□□□□□ -0.1
COL4A3-202ENST00000396578 GNG14A0A1W2PPG7 69 aa14.41□□□□□ -0.1
COL4A3-202ENST00000396578 TAF4O00268 1085 aa14.41□□□□□ -0.1
COL4A3-202ENST00000396578 TEX28O15482 410 aa14.41□□□□□ -0.1
COL4A3-202ENST00000396578 S100A9P06702 114 aaKnown RBP14.41□□□□□ -0.1
COL4A3-202ENST00000396578 VAC14Q08AM6 782 aa14.41□□□□□ -0.1
COL4A3-202ENST00000396578 EMC2Q15006 297 aa14.41□□□□□ -0.1
COL4A3-202ENST00000396578 TBCELQ5QJ74 424 aa14.41□□□□□ -0.1
COL4A3-202ENST00000396578 TIGD7Q6NT04 549 aaPredicted RBP14.41□□□□□ -0.1
COL4A3-202ENST00000396578 KLHL24Q6TFL4 600 aa14.41□□□□□ -0.1
COL4A3-202ENST00000396578 KRT74Q7RTS7 529 aa14.41□□□□□ -0.1
COL4A3-202ENST00000396578 KYQ8NBH2 561 aa14.41□□□□□ -0.1
COL4A3-202ENST00000396578 RORBQ92753 470 aa14.41□□□□□ -0.1
COL4A3-202ENST00000396578 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP14.41□□□□□ -0.1
COL4A3-202ENST00000396578 MTRF1O75570 445 aaKnown RBP14.41□□□□□ -0.1
COL4A3-202ENST00000396578 DDHD2O94830 711 aa14.41□□□□□ -0.1
COL4A3-202ENST00000396578 WARSP23381 471 aaKnown RBP14.41□□□□□ -0.1
COL4A3-202ENST00000396578 PPP2R1BP30154 601 aa14.41□□□□□ -0.1
COL4A3-202ENST00000396578 MAPKAPK2P49137 400 aa14.41□□□□□ -0.1
COL4A3-202ENST00000396578 GSTA3Q16772 222 aa14.41□□□□□ -0.1
COL4A3-202ENST00000396578 CACTIN-AS1Q8N1I8 211 aa14.41□□□□□ -0.1
COL4A3-202ENST00000396578 FBXO36Q8NEA4 188 aa14.41□□□□□ -0.1
COL4A3-202ENST00000396578 CDHR2Q9BYE9 1310 aa14.41□□□□□ -0.1
COL4A3-202ENST00000396578 FAM47E-STBD1D6RA91 191 aa14.41□□□□□ -0.1
COL4A3-202ENST00000396578 BIRC5O15392 142 aa14.41□□□□□ -0.1
COL4A3-202ENST00000396578 KLRC1P26715 233 aa14.41□□□□□ -0.1
COL4A3-202ENST00000396578 RFX3P48380 749 aa14.41□□□□□ -0.1
COL4A3-202ENST00000396578 ZSWIM7Q19AV6 140 aa14.41□□□□□ -0.1
COL4A3-202ENST00000396578 KLHDC7AQ5VTJ3 777 aa14.41□□□□□ -0.1
COL4A3-202ENST00000396578 ZFP1Q6P2D0 407 aa14.41□□□□□ -0.1
COL4A3-202ENST00000396578 STRA8Q7Z7C7 330 aa14.41□□□□□ -0.1
COL4A3-202ENST00000396578 DENND6AQ8IWF6 608 aa14.41□□□□□ -0.1
COL4A3-202ENST00000396578 PIGBQ92521 554 aa14.41□□□□□ -0.1
COL4A3-202ENST00000396578 MKNK1Q9BUB5 465 aa14.41□□□□□ -0.1
COL4A3-202ENST00000396578 QTRT2Q9H974 415 aaKnown RBP14.41□□□□□ -0.1
COL4A3-202ENST00000396578 GEMP55040 296 aa14.4□□□□□ -0.1
COL4A3-202ENST00000396578 SNX30Q5VWJ9 437 aa14.4□□□□□ -0.1
COL4A3-202ENST00000396578 MACC1Q6ZN28 852 aa14.4□□□□□ -0.1
COL4A3-202ENST00000396578 UTP15Q8TED0 518 aaKnown RBP14.4□□□□□ -0.1
COL4A3-202ENST00000396578 ZSWIM1Q9BR11 485 aa14.4□□□□□ -0.1
COL4A3-202ENST00000396578 ARMC7Q9H6L4 198 aa14.4□□□□□ -0.1
COL4A3-202ENST00000396578 GPRC5DQ9NZD1 345 aa14.4□□□□□ -0.1
COL4A3-202ENST00000396578 ITGB1BP2Q9UKP3 347 aa14.4□□□□□ -0.1
COL4A3-202ENST00000396578 MAP2P11137 1827 aaKnown RBP14.4□□□□□ -0.1
COL4A3-202ENST00000396578 EFCAB10A6NFE3 127 aa14.4□□□□□ -0.1
COL4A3-202ENST00000396578 KLHL41O60662 606 aa14.4□□□□□ -0.1
COL4A3-202ENST00000396578 ALOX12P18054 663 aa14.4□□□□□ -0.1
COL4A3-202ENST00000396578 GRK3P35626 688 aa14.4□□□□□ -0.1
COL4A3-202ENST00000396578 DDX39BQ13838 428 aaKnown RBP14.4□□□□□ -0.1
COL4A3-202ENST00000396578 NDUFAF6Q330K2 333 aa14.4□□□□□ -0.1
COL4A3-202ENST00000396578 C10orf120Q5SQS8 335 aa14.4□□□□□ -0.1
COL4A3-202ENST00000396578 ZCCHC8Q6NZY4 707 aaKnown RBP14.4□□□□□ -0.1
COL4A3-202ENST00000396578 HOMEZQ8IX15 550 aa14.4□□□□□ -0.1
COL4A3-202ENST00000396578 DEFB107AQ8IZN7 70 aa14.4□□□□□ -0.1
COL4A3-202ENST00000396578 SLITRK1Q96PX8 696 aa14.4□□□□□ -0.1
COL4A3-202ENST00000396578 IZUMO1Q8IYV9 350 aa14.4□□□□□ -0.1
COL4A3-202ENST00000396578 FAM192AQ9GZU8 254 aa14.4□□□□□ -0.1
COL4A3-202ENST00000396578 PIGUQ9H490 435 aa14.4□□□□□ -0.1
COL4A3-202ENST00000396578 DNAJC16Q9Y2G8 782 aa14.4□□□□□ -0.1
COL4A3-202ENST00000396578 ATG7O95352 703 aa14.4□□□□□ -0.1
COL4A3-202ENST00000396578 BOLA3Q53S33 107 aa14.4□□□□□ -0.1
COL4A3-202ENST00000396578 ZNF614Q8N883 585 aa14.4□□□□□ -0.1
COL4A3-202ENST00000396578 TRPC4APQ8TEL6 797 aa14.4□□□□□ -0.1
COL4A3-202ENST00000396578 HMG20AQ9NP66 347 aa14.4□□□□□ -0.1
COL4A3-202ENST00000396578 NAGPAQ9UK23 515 aa14.4□□□□□ -0.1
COL4A3-202ENST00000396578 NFICP08651 508 aa14.4□□□□□ -0.1
COL4A3-202ENST00000396578 NOS3P29474 1203 aa14.4□□□□□ -0.1
COL4A3-202ENST00000396578 MGAT5BQ3V5L5 792 aa14.4□□□□□ -0.1
COL4A3-202ENST00000396578 ZC2HC1CQ53FD0 456 aaPredicted RBP14.4□□□□□ -0.1
COL4A3-202ENST00000396578 KIAA0408Q6ZU52 694 aa14.4□□□□□ -0.1
COL4A3-202ENST00000396578 MYO1HQ8N1T3 1032 aa14.4□□□□□ -0.1
COL4A3-202ENST00000396578 L3MBTL3Q96JM7 780 aaPredicted RBP14.4□□□□□ -0.1
COL4A3-202ENST00000396578 PIF1Q9H611 641 aa14.4□□□□□ -0.1
COL4A3-202ENST00000396578 POLG2Q9UHN1 485 aa14.4□□□□□ -0.1
COL4A3-202ENST00000396578 LRCH1Q9Y2L9 728 aa14.4□□□□□ -0.1
COL4A3-202ENST00000396578 CLTBP09497 229 aa14.4□□□□□ -0.1
COL4A3-202ENST00000396578 PCNAP12004 261 aa14.4□□□□□ -0.1
COL4A3-202ENST00000396578 GLRBP48167 497 aa14.4□□□□□ -0.1
COL4A3-202ENST00000396578 TRAF3Q13114 568 aa14.4□□□□□ -0.1
COL4A3-202ENST00000396578 CASP12Q6UXS9 341 aa14.4□□□□□ -0.1
COL4A3-202ENST00000396578 LRRC74BQ6ZQY2 392 aa14.4□□□□□ -0.1
COL4A3-202ENST00000396578 ATP6V0D2Q8N8Y2 350 aa14.4□□□□□ -0.1
COL4A3-202ENST00000396578 PI4K2AQ9BTU6 479 aa14.4□□□□□ -0.1
COL4A3-202ENST00000396578 NOL6Q9H6R4 1146 aaKnown RBP14.4□□□□□ -0.1
COL4A3-202ENST00000396578 MIEF1Q9NQG6 463 aa14.4□□□□□ -0.1
COL4A3-202ENST00000396578 ZNF624Q9P2J8 865 aaPredicted RBP14.4□□□□□ -0.1
COL4A3-202ENST00000396578 RARGP13631 454 aa14.4□□□□□ -0.1
COL4A3-202ENST00000396578 STK4Q13043 487 aa14.4□□□□□ -0.1
COL4A3-202ENST00000396578 CDH18Q13634 790 aa14.4□□□□□ -0.1
COL4A3-202ENST00000396578 B3GALNT2Q8NCR0 500 aa14.4□□□□□ -0.1
COL4A3-202ENST00000396578 RPRD1BQ9NQG5 326 aaKnown RBP14.4□□□□□ -0.1
COL4A3-202ENST00000396578 KDM6AO15550 1401 aaPredicted RBP14.39□□□□□ -0.11
COL4A3-202ENST00000396578 PHGDHO43175 533 aaKnown RBP14.39□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms