RNA–Protein interactions for RNA: ENST00000396366.6

FXN-203, Transcript of frataxin, humanhuman

TSL 2 BASIC

Gene FXN, Length 922 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FXN-203ENST00000396366 HEXIM2Q96MH2 286 aaKnown RBP19.34■□□□□ 0.69
FXN-203ENST00000396366 TIGD1Q96MW7 591 aa19.34■□□□□ 0.69
FXN-203ENST00000396366 NMUR1Q9HB89 426 aa19.34■□□□□ 0.69
FXN-203ENST00000396366 CISHQ9NSE2 258 aa19.34■□□□□ 0.69
FXN-203ENST00000396366 NUDT5Q9UKK9 219 aa19.34■□□□□ 0.69
FXN-203ENST00000396366 USP18Q9UMW8 372 aa19.34■□□□□ 0.69
FXN-203ENST00000396366 SDK1Q7Z5N4 2213 aa19.33■□□□□ 0.69
FXN-203ENST00000396366 E2F8A0AVK6 867 aa19.33■□□□□ 0.68
FXN-203ENST00000396366 SLC9A3R1O14745 358 aaPredicted RBP19.33■□□□□ 0.68
FXN-203ENST00000396366 GADD45BO75293 160 aaPredicted RBP19.33■□□□□ 0.68
FXN-203ENST00000396366 CD44P16070 742 aaKnown RBP19.33■□□□□ 0.68
FXN-203ENST00000396366 ACO1P21399 889 aaKnown RBP19.33■□□□□ 0.68
FXN-203ENST00000396366 TUBP50607 506 aa19.33■□□□□ 0.68
FXN-203ENST00000396366 LY6G5CQ5SRR4 150 aa19.33■□□□□ 0.68
FXN-203ENST00000396366 TCERG1LQ5VWI1 586 aa19.33■□□□□ 0.68
FXN-203ENST00000396366 CEP68Q76N32 757 aa19.33■□□□□ 0.68
FXN-203ENST00000396366 DDX42Q86XP3 938 aaKnown RBP eCLIP19.33■□□□□ 0.68
FXN-203ENST00000396366 BBS7Q8IWZ6 715 aa19.33■□□□□ 0.68
FXN-203ENST00000396366 ZC3H3Q8IXZ2 948 aaKnown RBP19.33■□□□□ 0.68
FXN-203ENST00000396366 FAM160A2Q8N612 972 aaPredicted RBP19.33■□□□□ 0.68
FXN-203ENST00000396366 KIAA1958Q8N8K9 716 aa19.33■□□□□ 0.68
FXN-203ENST00000396366 SLC4A11Q8NBS3 891 aa19.33■□□□□ 0.68
FXN-203ENST00000396366 TSG101Q99816 390 aa19.33■□□□□ 0.68
FXN-203ENST00000396366 FBXO44Q9H4M3 255 aa19.33■□□□□ 0.68
FXN-203ENST00000396366 SCML2Q9UQR0 700 aa19.33■□□□□ 0.68
FXN-203ENST00000396366 SH3BP1Q9Y3L3 701 aa19.33■□□□□ 0.68
FXN-203ENST00000396366 TLR5O60602 858 aa19.32■□□□□ 0.68
FXN-203ENST00000396366 RETP07949 1114 aa19.32■□□□□ 0.68
FXN-203ENST00000396366 RAD23BP54727 409 aa19.32■□□□□ 0.68
FXN-203ENST00000396366 FKBP3Q00688 224 aaKnown RBP19.32■□□□□ 0.68
FXN-203ENST00000396366 DMC1Q14565 340 aa19.32■□□□□ 0.68
FXN-203ENST00000396366 SYT13Q7L8C5 426 aa19.32■□□□□ 0.68
FXN-203ENST00000396366 ARHGAP30Q7Z6I6 1101 aaPredicted RBP19.32■□□□□ 0.68
FXN-203ENST00000396366 NAT16Q8N8M0 369 aa19.32■□□□□ 0.68
FXN-203ENST00000396366 USP33Q8TEY7 942 aa19.32■□□□□ 0.68
FXN-203ENST00000396366 KLF16Q9BXK1 252 aaPredicted RBP19.32■□□□□ 0.68
FXN-203ENST00000396366 NACA2Q9H009 215 aa19.32■□□□□ 0.68
FXN-203ENST00000396366 TLR8Q9NR97 1041 aaKnown RBP19.32■□□□□ 0.68
FXN-203ENST00000396366 MAN1B1Q9UKM7 699 aa19.32■□□□□ 0.68
FXN-203ENST00000396366 A0A1W2PQH9 124 aa19.31■□□□□ 0.68
FXN-203ENST00000396366 MDM4O15151 490 aa19.31■□□□□ 0.68
FXN-203ENST00000396366 SLC16A3O15427 465 aaKnown RBP19.31■□□□□ 0.68
FXN-203ENST00000396366 STX10O60499 249 aa19.31■□□□□ 0.68
FXN-203ENST00000396366 GREM1O60565 184 aa19.31■□□□□ 0.68
FXN-203ENST00000396366 RPP40O75818 363 aaKnown RBP19.31■□□□□ 0.68
FXN-203ENST00000396366 ADH5P11766 374 aa19.31■□□□□ 0.68
FXN-203ENST00000396366 BMP6P22004 513 aa19.31■□□□□ 0.68
FXN-203ENST00000396366 KDSRQ06136 332 aa19.31■□□□□ 0.68
FXN-203ENST00000396366 EMC10Q5UCC4 262 aa19.31■□□□□ 0.68
FXN-203ENST00000396366 SCD5Q86SK9 330 aa19.31■□□□□ 0.68
FXN-203ENST00000396366 KBTBD6Q86V97 674 aa19.31■□□□□ 0.68
FXN-203ENST00000396366 TMEM25Q86YD3 366 aa19.31■□□□□ 0.68
FXN-203ENST00000396366 CCDC33Q8N5R6 958 aa19.31■□□□□ 0.68
FXN-203ENST00000396366 CAMKK1Q8N5S9 505 aa19.31■□□□□ 0.68
FXN-203ENST00000396366 GPR161Q8N6U8 529 aaKnown RBP19.31■□□□□ 0.68
FXN-203ENST00000396366 GAB3Q8WWW8 586 aa19.31■□□□□ 0.68
FXN-203ENST00000396366 TMEM176AQ96HP8 235 aa19.31■□□□□ 0.68
FXN-203ENST00000396366 PNKPQ96T60 521 aa19.31■□□□□ 0.68
FXN-203ENST00000396366 DUSP16Q9BY84 665 aa19.31■□□□□ 0.68
FXN-203ENST00000396366 ZDHHC4Q9NPG8 344 aa19.31■□□□□ 0.68
FXN-203ENST00000396366 TBC1D14Q9P2M4 693 aa19.31■□□□□ 0.68
FXN-203ENST00000396366 DYNC1LI1Q9Y6G9 523 aaKnown RBP19.31■□□□□ 0.68
FXN-203ENST00000396366 CACNA1AO00555 2505 aa19.31■□□□□ 0.68
FXN-203ENST00000396366 RALGAPA1Q6GYQ0 2036 aa19.3■□□□□ 0.68
FXN-203ENST00000396366 AXIN1O15169 862 aa19.3■□□□□ 0.68
FXN-203ENST00000396366 ADH1CP00326 375 aa19.3■□□□□ 0.68
FXN-203ENST00000396366 TRIM21P19474 475 aaKnown RBP19.3■□□□□ 0.68
FXN-203ENST00000396366 KIF11P52732 1056 aa19.3■□□□□ 0.68
FXN-203ENST00000396366 LRMPQ12912 555 aa19.3■□□□□ 0.68
FXN-203ENST00000396366 SLC35C1Q96A29 364 aa19.3■□□□□ 0.68
FXN-203ENST00000396366 DUSP9Q99956 384 aaKnown RBP19.3■□□□□ 0.68
FXN-203ENST00000396366 CYLDQ9NQC7 956 aa19.3■□□□□ 0.68
FXN-203ENST00000396366 DLL3Q9NYJ7 618 aa19.3■□□□□ 0.68
FXN-203ENST00000396366 COQ4Q9Y3A0 265 aa19.3■□□□□ 0.68
FXN-203ENST00000396366 CCDC163A0A0D9SF12 145 aa19.29■□□□□ 0.68
FXN-203ENST00000396366 DCLK1O15075 740 aa19.29■□□□□ 0.68
FXN-203ENST00000396366 TRIM24O15164 1050 aa19.29■□□□□ 0.68
FXN-203ENST00000396366 KAT7O95251 611 aa19.29■□□□□ 0.68
FXN-203ENST00000396366 CCDC192P0DO97 292 aa19.29■□□□□ 0.68
FXN-203ENST00000396366 CHRM1P11229 460 aaPredicted RBP19.29■□□□□ 0.68
FXN-203ENST00000396366 RARGP13631 454 aa19.29■□□□□ 0.68
FXN-203ENST00000396366 HNRNPLP14866 589 aaKnown RBP eCLIP19.29■□□□□ 0.684e-13■■□□□ 13.3
FXN-203ENST00000396366 ATP5C1P36542 298 aaKnown RBP19.29■□□□□ 0.68
FXN-203ENST00000396366 LRRC63Q05C16 580 aa19.29■□□□□ 0.68
FXN-203ENST00000396366 CCDC6Q16204 474 aa19.29■□□□□ 0.68
FXN-203ENST00000396366 PHTF2Q8N3S3 785 aa19.29■□□□□ 0.68
FXN-203ENST00000396366 SEMA4GQ9NTN9 838 aa19.29■□□□□ 0.68
FXN-203ENST00000396366 MTPAPQ9NVV4 582 aaKnown RBP eCLIP19.29■□□□□ 0.68
FXN-203ENST00000396366 ARMCX3Q9UH62 379 aaPredicted RBP19.29■□□□□ 0.68
FXN-203ENST00000396366 HOOK1Q9UJC3 728 aaKnown RBP19.29■□□□□ 0.68
FXN-203ENST00000396366 NAGPAQ9UK23 515 aa19.29■□□□□ 0.68
FXN-203ENST00000396366 INVSQ9Y283 1065 aa19.29■□□□□ 0.68
FXN-203ENST00000396366 PPP1R3GB7ZBB8 358 aa19.28■□□□□ 0.68
FXN-203ENST00000396366 BIN1O00499 593 aa19.28■□□□□ 0.68
FXN-203ENST00000396366 APBB3O95704 486 aa19.28■□□□□ 0.68
FXN-203ENST00000396366 TIE1P35590 1138 aa19.28■□□□□ 0.68
FXN-203ENST00000396366 GAD2Q05329 585 aa19.28■□□□□ 0.68
FXN-203ENST00000396366 CUL2Q13617 745 aa19.28■□□□□ 0.68
FXN-203ENST00000396366 PUM1Q14671 1186 aaKnown RBP eCLIP19.28■□□□□ 0.68
FXN-203ENST00000396366 ANO4Q32M45 955 aa19.28■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms