RNA–Protein interactions for RNA: ENST00000395898.3

VPS13C-204, Transcript of vacuolar protein sorting 13 homolog C, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VPS13C, Length 11,012 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13C-204ENST00000395898 ELAVL2Q12926 359 aaKnown RBP5.63□□□□□ -1.51
VPS13C-204ENST00000395898 PLD1Q13393 1074 aa5.63□□□□□ -1.51
VPS13C-204ENST00000395898 KDM7AQ6ZMT4 941 aa5.63□□□□□ -1.51
VPS13C-204ENST00000395898 TBC1D13Q9NVG8 400 aa5.63□□□□□ -1.51
VPS13C-204ENST00000395898 SLC24A2Q9UI40 661 aa5.63□□□□□ -1.51
VPS13C-204ENST00000395898 KIF1AQ12756 1690 aa5.63□□□□□ -1.51
VPS13C-204ENST00000395898 ZBTB39O15060 712 aa5.63□□□□□ -1.51
VPS13C-204ENST00000395898 MPOP05164 745 aa5.63□□□□□ -1.51
VPS13C-204ENST00000395898 CKMP06732 381 aa5.63□□□□□ -1.51
VPS13C-204ENST00000395898 CAPZA2P47755 286 aa5.63□□□□□ -1.51
VPS13C-204ENST00000395898 NPTX2P47972 431 aa5.63□□□□□ -1.51
VPS13C-204ENST00000395898 CCNG1P51959 295 aa5.63□□□□□ -1.51
VPS13C-204ENST00000395898 TGM3Q08188 693 aa5.63□□□□□ -1.51
VPS13C-204ENST00000395898 TRIP10Q15642 601 aa5.63□□□□□ -1.51
VPS13C-204ENST00000395898 DDI1Q8WTU0 396 aa5.63□□□□□ -1.51
VPS13C-204ENST00000395898 CASP10Q92851 521 aa5.63□□□□□ -1.51
VPS13C-204ENST00000395898 DCLRE1BQ9H816 532 aa5.63□□□□□ -1.51
VPS13C-204ENST00000395898 NMRK2Q9NPI5 230 aa5.63□□□□□ -1.51
VPS13C-204ENST00000395898 IL1RAPL1Q9NZN1 696 aa5.63□□□□□ -1.51
VPS13C-204ENST00000395898 BARX2Q9UMQ3 279 aaPredicted RBP5.63□□□□□ -1.51
VPS13C-204ENST00000395898 PHTF1Q9UMS5 762 aa5.63□□□□□ -1.51
VPS13C-204ENST00000395898 PLA2G4CQ9UP65 541 aa5.63□□□□□ -1.51
VPS13C-204ENST00000395898 CHD4Q14839 1912 aa5.63□□□□□ -1.51
VPS13C-204ENST00000395898 A0A087X0T9 212 aa5.63□□□□□ -1.51
VPS13C-204ENST00000395898 TMEM114B3SHH9 223 aa5.63□□□□□ -1.51
VPS13C-204ENST00000395898 GLP2RO95838 553 aa5.63□□□□□ -1.51
VPS13C-204ENST00000395898 FAM228BP0C875 321 aa5.63□□□□□ -1.51
VPS13C-204ENST00000395898 ACADSP16219 412 aa5.63□□□□□ -1.51
VPS13C-204ENST00000395898 MZF1P28698 734 aaPredicted RBP5.63□□□□□ -1.51
VPS13C-204ENST00000395898 CCR1P32246 355 aa5.63□□□□□ -1.51
VPS13C-204ENST00000395898 ZNF135P52742 658 aaPredicted RBP5.63□□□□□ -1.51
VPS13C-204ENST00000395898 MAD2L1Q13257 205 aaPredicted RBP5.63□□□□□ -1.51
VPS13C-204ENST00000395898 TRIP4Q15650 581 aaPredicted RBP5.63□□□□□ -1.51
VPS13C-204ENST00000395898 FBXO47Q5MNV8 452 aa5.63□□□□□ -1.51
VPS13C-204ENST00000395898 ERMARDQ5T6L9 678 aa5.63□□□□□ -1.51
VPS13C-204ENST00000395898 METTL7BQ6UX53 244 aa5.63□□□□□ -1.51
VPS13C-204ENST00000395898 OTOAQ7RTW8 1153 aa5.63□□□□□ -1.51
VPS13C-204ENST00000395898 ACOT1Q86TX2 421 aa5.63□□□□□ -1.51
VPS13C-204ENST00000395898 CYP4Z1Q86W10 505 aa5.63□□□□□ -1.51
VPS13C-204ENST00000395898 CAMKK2Q96RR4 588 aa5.63□□□□□ -1.51
VPS13C-204ENST00000395898 MGAT4DA6NG13 374 aa5.63□□□□□ -1.51
VPS13C-204ENST00000395898 F8W810 466 aa5.63□□□□□ -1.51
VPS13C-204ENST00000395898 CELF2O95319 508 aaKnown RBP5.63□□□□□ -1.51
VPS13C-204ENST00000395898 RXRGP48443 463 aa5.63□□□□□ -1.51
VPS13C-204ENST00000395898 RAB27AP51159 221 aa5.63□□□□□ -1.51
VPS13C-204ENST00000395898 RENBPP51606 427 aa5.63□□□□□ -1.51
VPS13C-204ENST00000395898 BST2Q10589 180 aaKnown RBP5.63□□□□□ -1.51
VPS13C-204ENST00000395898 IYDQ6PHW0 289 aa5.63□□□□□ -1.51
VPS13C-204ENST00000395898 SLC47A2Q86VL8 602 aa5.63□□□□□ -1.51
VPS13C-204ENST00000395898 CLEC10AQ8IUN9 316 aa5.63□□□□□ -1.51
VPS13C-204ENST00000395898 MARCH10Q8NA82 808 aaPredicted RBP5.63□□□□□ -1.51
VPS13C-204ENST00000395898 SYNDIG1Q9H7V2 258 aa5.63□□□□□ -1.51
VPS13C-204ENST00000395898 MIEF1Q9NQG6 463 aa5.63□□□□□ -1.51
VPS13C-204ENST00000395898 CACNA2D2Q9NY47 1150 aa5.63□□□□□ -1.51
VPS13C-204ENST00000395898 ZKSCAN7Q9P0L1 754 aaPredicted RBP5.63□□□□□ -1.51
VPS13C-204ENST00000395898 ATMINO43313 823 aaPredicted RBP5.63□□□□□ -1.51
VPS13C-204ENST00000395898 USP1O94782 785 aa5.63□□□□□ -1.51
VPS13C-204ENST00000395898 TPBGLP0DKB5 382 aa5.63□□□□□ -1.51
VPS13C-204ENST00000395898 FCGR1AP12314 374 aa5.63□□□□□ -1.51
VPS13C-204ENST00000395898 C4BPBP20851 252 aa5.63□□□□□ -1.51
VPS13C-204ENST00000395898 RFX5P48382 616 aaPredicted RBP5.63□□□□□ -1.51
VPS13C-204ENST00000395898 C1DQ13901 141 aaKnown RBP5.63□□□□□ -1.51
VPS13C-204ENST00000395898 GIT2Q14161 759 aa5.63□□□□□ -1.51
VPS13C-204ENST00000395898 NCF4Q15080 339 aa5.63□□□□□ -1.51
VPS13C-204ENST00000395898 PDIA6Q15084 440 aa5.63□□□□□ -1.51
VPS13C-204ENST00000395898 ATP6AP1LQ52LC2 224 aa5.63□□□□□ -1.51
VPS13C-204ENST00000395898 C11orf63Q6NUN7 778 aa5.63□□□□□ -1.51
VPS13C-204ENST00000395898 PLEKHH3Q7Z736 793 aa5.63□□□□□ -1.51
VPS13C-204ENST00000395898 GALNT4Q8N4A0 578 aa5.63□□□□□ -1.51
VPS13C-204ENST00000395898 AGO4Q9HCK5 861 aaKnown RBP5.63□□□□□ -1.51
VPS13C-204ENST00000395898 CISHQ9NSE2 258 aa5.63□□□□□ -1.51
VPS13C-204ENST00000395898 IFRD1O00458 451 aaPredicted RBP5.62□□□□□ -1.51
VPS13C-204ENST00000395898 PLA2G6O60733 806 aa5.62□□□□□ -1.51
VPS13C-204ENST00000395898 IFNA14P01570 189 aa5.62□□□□□ -1.51
VPS13C-204ENST00000395898 EIF2S1P05198 315 aaKnown RBP5.62□□□□□ -1.51
VPS13C-204ENST00000395898 ACADMP11310 421 aa5.62□□□□□ -1.51
VPS13C-204ENST00000395898 DNAJB2P25686 324 aa5.62□□□□□ -1.51
VPS13C-204ENST00000395898 AXLP30530 894 aa5.62□□□□□ -1.51
VPS13C-204ENST00000395898 TAF2Q6P1X5 1199 aa5.62□□□□□ -1.51
VPS13C-204ENST00000395898 TTC33Q6PID6 262 aaPredicted RBP5.62□□□□□ -1.51
VPS13C-204ENST00000395898 PRDM16Q9HAZ2 1276 aa5.62□□□□□ -1.51
VPS13C-204ENST00000395898 CHST12Q9NRB3 414 aa5.62□□□□□ -1.51
VPS13C-204ENST00000395898 DLG5Q8TDM6 1919 aa5.62□□□□□ -1.51
VPS13C-204ENST00000395898 CCDC88AQ3V6T2 1871 aa5.62□□□□□ -1.51
VPS13C-204ENST00000395898 ATP5BP06576 529 aaKnown RBP5.62□□□□□ -1.51
VPS13C-204ENST00000395898 PMS1P54277 932 aaKnown RBP5.62□□□□□ -1.51
VPS13C-204ENST00000395898 EPHB3P54753 998 aa5.62□□□□□ -1.51
VPS13C-204ENST00000395898 POLR2LP62875 67 aaKnown RBP5.62□□□□□ -1.51
VPS13C-204ENST00000395898 CHRNB3Q05901 458 aa5.62□□□□□ -1.51
VPS13C-204ENST00000395898 L3MBTL3Q96JM7 780 aaPredicted RBP5.62□□□□□ -1.51
VPS13C-204ENST00000395898 COPS7BQ9H9Q2 264 aaPredicted RBP5.62□□□□□ -1.51
VPS13C-204ENST00000395898 PCDHB12Q9Y5F1 795 aa5.62□□□□□ -1.51
VPS13C-204ENST00000395898 SALL1Q9NSC2 1324 aa5.62□□□□□ -1.51
VPS13C-204ENST00000395898 RNF103O00237 685 aa5.62□□□□□ -1.51
VPS13C-204ENST00000395898 FDPSP14324 419 aaKnown RBP5.62□□□□□ -1.51
VPS13C-204ENST00000395898 TKTP29401 623 aaKnown RBP5.62□□□□□ -1.51
VPS13C-204ENST00000395898 GRB10Q13322 594 aa5.62□□□□□ -1.51
VPS13C-204ENST00000395898 PAPD7Q5XG87 772 aaKnown RBP5.62□□□□□ -1.51
VPS13C-204ENST00000395898 STRA8Q7Z7C7 330 aa5.62□□□□□ -1.51
VPS13C-204ENST00000395898 RUSC1Q9BVN2 902 aa5.62□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 14.9 ms