RNA–Protein interactions for RNA: ENST00000395860.6

VCPKMT-202, Transcript of valosin containing protein lysine methyltransferase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VCPKMT, Length 1,761 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCPKMT-202ENST00000395860 CAPN9O14815 690 aa21.36■■□□□ 1.01
VCPKMT-202ENST00000395860 TCF4P15884 667 aa21.36■■□□□ 1.01
VCPKMT-202ENST00000395860 NOS2P35228 1153 aa21.36■■□□□ 1.01
VCPKMT-202ENST00000395860 TUFMP49411 452 aaKnown RBP21.36■■□□□ 1.01
VCPKMT-202ENST00000395860 ZNF211Q13398 564 aaPredicted RBP21.36■■□□□ 1.01
VCPKMT-202ENST00000395860 RAB33AQ14088 237 aa21.36■■□□□ 1.01
VCPKMT-202ENST00000395860 DCAF6Q58WW2 860 aa21.36■■□□□ 1.01
VCPKMT-202ENST00000395860 SH3PXD2AQ5TCZ1 1133 aa21.36■■□□□ 1.01
VCPKMT-202ENST00000395860 TMC7Q7Z402 723 aa21.36■■□□□ 1.01
VCPKMT-202ENST00000395860 ARFGAP1Q8N6T3 406 aa21.36■■□□□ 1.01
VCPKMT-202ENST00000395860 STKLD1Q8NE28 680 aa21.36■■□□□ 1.01
VCPKMT-202ENST00000395860 FAM172AQ8WUF8 416 aa21.36■■□□□ 1.01
VCPKMT-202ENST00000395860 SLC2A13Q96QE2 648 aa21.36■■□□□ 1.01
VCPKMT-202ENST00000395860 UBE2OQ9C0C9 1292 aaKnown RBP21.36■■□□□ 1.01
VCPKMT-202ENST00000395860 FBXO44Q9H4M3 255 aa21.36■■□□□ 1.01
VCPKMT-202ENST00000395860 ALG13Q9NP73 1137 aaKnown RBP21.36■■□□□ 1.01
VCPKMT-202ENST00000395860 NGRNQ9NPE2 291 aaKnown RBP21.36■■□□□ 1.01
VCPKMT-202ENST00000395860 EHD2Q9NZN4 543 aa21.36■■□□□ 1.01
VCPKMT-202ENST00000395860 STAP1Q9ULZ2 295 aa21.36■■□□□ 1.01
VCPKMT-202ENST00000395860 LZTS1Q9Y250 596 aa21.36■■□□□ 1.01
VCPKMT-202ENST00000395860 LILRB3O75022 631 aa21.36■■□□□ 1.01
VCPKMT-202ENST00000395860 ATF2P15336 505 aa21.36■■□□□ 1.01
VCPKMT-202ENST00000395860 ZFYVE27Q5T4F4 411 aa21.36■■□□□ 1.01
VCPKMT-202ENST00000395860 SEL1L2Q5TEA6 688 aa21.36■■□□□ 1.01
VCPKMT-202ENST00000395860 LRRC38Q5VT99 294 aa21.36■■□□□ 1.01
VCPKMT-202ENST00000395860 DENND5BQ6ZUT9 1274 aa21.36■■□□□ 1.01
VCPKMT-202ENST00000395860 BHLHA9Q7RTU4 235 aa21.36■■□□□ 1.01
VCPKMT-202ENST00000395860 SPATA17Q96L03 361 aa21.36■■□□□ 1.01
VCPKMT-202ENST00000395860 RXFP1Q9HBX9 757 aa21.36■■□□□ 1.01
VCPKMT-202ENST00000395860 HSFX1Q9UBD0 423 aa21.36■■□□□ 1.01
VCPKMT-202ENST00000395860 PDE2AO00408 941 aaPredicted RBP21.35■■□□□ 1.01
VCPKMT-202ENST00000395860 CXCL14O95715 111 aa21.35■■□□□ 1.01
VCPKMT-202ENST00000395860 CA3P07451 260 aa21.35■■□□□ 1.01
VCPKMT-202ENST00000395860 MIPP30301 263 aa21.35■■□□□ 1.01
VCPKMT-202ENST00000395860 PCK1P35558 622 aa21.35■■□□□ 1.01
VCPKMT-202ENST00000395860 SULT1E1P49888 294 aa21.35■■□□□ 1.01
VCPKMT-202ENST00000395860 SLC25A11Q02978 314 aaKnown RBP21.35■■□□□ 1.01
VCPKMT-202ENST00000395860 RASGEF1CQ8N431 466 aa21.35■■□□□ 1.01
VCPKMT-202ENST00000395860 GPR152Q8TDT2 470 aa21.35■■□□□ 1.01
VCPKMT-202ENST00000395860 NCAPGQ9BPX3 1015 aa21.35■■□□□ 1.01
VCPKMT-202ENST00000395860 ENTPD7Q9NQZ7 604 aa21.35■■□□□ 1.01
VCPKMT-202ENST00000395860 SMARCAL1Q9NZC9 954 aa21.35■■□□□ 1.01
VCPKMT-202ENST00000395860 MTUS1Q9ULD2 1270 aa21.35■■□□□ 1.01
VCPKMT-202ENST00000395860 NAALADL1Q9UQQ1 740 aa21.35■■□□□ 1.01
VCPKMT-202ENST00000395860 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP21.34■■□□□ 1.01
VCPKMT-202ENST00000395860 CTAGE15A4D2H0 777 aa21.34■■□□□ 1.01
VCPKMT-202ENST00000395860 TEX28O15482 410 aa21.34■■□□□ 1.01
VCPKMT-202ENST00000395860 RTN3O95197 1032 aaPredicted RBP21.34■■□□□ 1.01
VCPKMT-202ENST00000395860 CTAGE8P0CG41 777 aa21.34■■□□□ 1.01
VCPKMT-202ENST00000395860 NCAM1P13591 858 aa21.34■■□□□ 1.01
VCPKMT-202ENST00000395860 SLC25A52Q3SY17 297 aa21.34■■□□□ 1.01
VCPKMT-202ENST00000395860 BSPRYQ5W0U4 402 aa21.34■■□□□ 1.01
VCPKMT-202ENST00000395860 POLNQ7Z5Q5 900 aa21.34■■□□□ 1.01
VCPKMT-202ENST00000395860 CTAGE6Q86UF2 777 aa21.34■■□□□ 1.01
VCPKMT-202ENST00000395860 CTAGE4Q8IX94 777 aa21.34■■□□□ 1.01
VCPKMT-202ENST00000395860 KATNAL2Q8IYT4 538 aa21.34■■□□□ 1.01
VCPKMT-202ENST00000395860 ACTRT1Q8TDG2 376 aa21.34■■□□□ 1.01
VCPKMT-202ENST00000395860 TCF25Q9BQ70 676 aa21.34■■□□□ 1.01
VCPKMT-202ENST00000395860 C11orf84Q9BUA3 381 aaPredicted RBP21.34■■□□□ 1.01
VCPKMT-202ENST00000395860 TRIM62Q9BVG3 475 aa21.34■■□□□ 1.01
VCPKMT-202ENST00000395860 ZWILCHQ9H900 591 aa21.34■■□□□ 1.01
VCPKMT-202ENST00000395860 CYP4F11Q9HBI6 524 aa21.34■■□□□ 1.01
VCPKMT-202ENST00000395860 PCSK1NQ9UHG2 260 aa21.34■■□□□ 1.01
VCPKMT-202ENST00000395860 USP18Q9UMW8 372 aa21.34■■□□□ 1.01
VCPKMT-202ENST00000395860 C5orf67F2Z3F1 127 aa21.33■■□□□ 1.01
VCPKMT-202ENST00000395860 PGRMC1O00264 195 aaKnown RBP21.33■■□□□ 1.01
VCPKMT-202ENST00000395860 ARHGEF15O94989 841 aa21.33■■□□□ 1.01
VCPKMT-202ENST00000395860 SEC24AO95486 1093 aa21.33■■□□□ 1.01
VCPKMT-202ENST00000395860 FYNP06241 537 aa21.33■■□□□ 1.01
VCPKMT-202ENST00000395860 KRT7P08729 469 aa21.33■■□□□ 1.01
VCPKMT-202ENST00000395860 PYGMP11217 842 aa21.33■■□□□ 1.01
VCPKMT-202ENST00000395860 TFE3P19532 575 aaPredicted RBP21.33■■□□□ 1.01
VCPKMT-202ENST00000395860 YWHAGP61981 247 aaKnown RBP eCLIP21.33■■□□□ 1.01
VCPKMT-202ENST00000395860 RAB6CQ53S08 254 aa21.33■■□□□ 1.01
VCPKMT-202ENST00000395860 ODF2Q5BJF6 829 aa21.33■■□□□ 1.01
VCPKMT-202ENST00000395860 SYPL2Q5VXT5 272 aa21.33■■□□□ 1.01
VCPKMT-202ENST00000395860 LRRN4CLQ8ND94 238 aa21.33■■□□□ 1.01
VCPKMT-202ENST00000395860 GIPC2Q8TF65 315 aa21.33■■□□□ 1.01
VCPKMT-202ENST00000395860 POF1BQ8WVV4 589 aa21.33■■□□□ 1.01
VCPKMT-202ENST00000395860 TBCBQ99426 244 aa21.33■■□□□ 1.01
VCPKMT-202ENST00000395860 RAB6CQ9H0N0 254 aa21.33■■□□□ 1.01
VCPKMT-202ENST00000395860 DDX56Q9NY93 547 aaKnown RBP21.33■■□□□ 1.01
VCPKMT-202ENST00000395860 SCML2Q9UQR0 700 aa21.33■■□□□ 1.01
VCPKMT-202ENST00000395860 PCDHA11Q9Y5I1 949 aa21.33■■□□□ 1.01
VCPKMT-202ENST00000395860 PRPSAP2O60256 369 aa21.33■■□□□ 1
VCPKMT-202ENST00000395860 TRUB2O95900 331 aaKnown RBP21.33■■□□□ 1
VCPKMT-202ENST00000395860 RB1P06400 928 aa21.33■■□□□ 1
VCPKMT-202ENST00000395860 CNPP09543 421 aaKnown RBP21.33■■□□□ 1
VCPKMT-202ENST00000395860 ATF6P18850 670 aa21.33■■□□□ 1
VCPKMT-202ENST00000395860 YWHAQP27348 245 aa21.33■■□□□ 1
VCPKMT-202ENST00000395860 IL1R2P27930 398 aa21.33■■□□□ 1
VCPKMT-202ENST00000395860 ELF1P32519 619 aa21.33■■□□□ 1
VCPKMT-202ENST00000395860 USP46P62068 366 aa21.33■■□□□ 1
VCPKMT-202ENST00000395860 UBE3AQ05086 875 aa21.33■■□□□ 1
VCPKMT-202ENST00000395860 SMC1AQ14683 1233 aaKnown RBP21.33■■□□□ 1
VCPKMT-202ENST00000395860 ATP13A4Q4VNC1 1196 aa21.33■■□□□ 1
VCPKMT-202ENST00000395860 TXNRD3NBQ6F5E7 133 aa21.33■■□□□ 1
VCPKMT-202ENST00000395860 AADACL2Q6P093 401 aa21.33■■□□□ 1
VCPKMT-202ENST00000395860 SCYL2Q6P3W7 929 aa21.33■■□□□ 1
VCPKMT-202ENST00000395860 STRADAQ7RTN6 431 aa21.33■■□□□ 1
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms