RNA–Protein interactions for RNA: ENST00000395802.7

VAPB-202, Transcript of VAMP associated protein B and C, humanhuman

TSL 1 (best) BASIC

Gene VAPB, Length 1,834 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPB-202ENST00000395802 JOSD2Q8TAC2 188 aa14.33□□□□□ -0.12
VAPB-202ENST00000395802 SLITRK1Q96PX8 696 aa14.33□□□□□ -0.12
VAPB-202ENST00000395802 SLC28A3Q9HAS3 691 aa14.33□□□□□ -0.12
VAPB-202ENST00000395802 ABCC13Q9NSE7 274 aa14.33□□□□□ -0.12
VAPB-202ENST00000395802 TMEM30AQ9NV96 361 aa14.33□□□□□ -0.12
VAPB-202ENST00000395802 SCML2Q9UQR0 700 aa14.33□□□□□ -0.12
VAPB-202ENST00000395802 H3BNC9 293 aa14.32□□□□□ -0.12
VAPB-202ENST00000395802 ADAM12O43184 909 aa14.32□□□□□ -0.12
VAPB-202ENST00000395802 GRAP2O75791 330 aa14.32□□□□□ -0.12
VAPB-202ENST00000395802 GABBR2O75899 941 aa14.32□□□□□ -0.12
VAPB-202ENST00000395802 LTFP02788 710 aa14.32□□□□□ -0.12
VAPB-202ENST00000395802 CNPP09543 421 aaKnown RBP14.32□□□□□ -0.12
VAPB-202ENST00000395802 CSH1P0DML2 217 aa14.32□□□□□ -0.12
VAPB-202ENST00000395802 CSH2P0DML3 217 aa14.32□□□□□ -0.12
VAPB-202ENST00000395802 MYOGP15173 224 aa14.32□□□□□ -0.12
VAPB-202ENST00000395802 CTNNA2P26232 953 aa14.32□□□□□ -0.12
VAPB-202ENST00000395802 CTNNA1P35221 906 aaKnown RBP14.32□□□□□ -0.12
VAPB-202ENST00000395802 CETN2P41208 172 aa14.32□□□□□ -0.12
VAPB-202ENST00000395802 SSR1P43307 286 aaKnown RBP14.32□□□□□ -0.12
VAPB-202ENST00000395802 RWDD2BP57060 319 aa14.32□□□□□ -0.12
VAPB-202ENST00000395802 SLC25A52Q3SY17 297 aa14.32□□□□□ -0.12
VAPB-202ENST00000395802 PPP2R2DQ66LE6 453 aa14.32□□□□□ -0.12
VAPB-202ENST00000395802 CC2D1AQ6P1N0 951 aaPredicted RBP14.32□□□□□ -0.12
VAPB-202ENST00000395802 POLNQ7Z5Q5 900 aa14.32□□□□□ -0.12
VAPB-202ENST00000395802 ITIH5Q86UX2 942 aa14.32□□□□□ -0.12
VAPB-202ENST00000395802 EMC1Q8N766 993 aa14.32□□□□□ -0.12
VAPB-202ENST00000395802 DDX23Q9BUQ8 820 aaKnown RBP14.32□□□□□ -0.12
VAPB-202ENST00000395802 CARD6Q9BX69 1037 aa14.32□□□□□ -0.12
VAPB-202ENST00000395802 PBX4Q9BYU1 374 aa14.32□□□□□ -0.12
VAPB-202ENST00000395802 LMAN2LQ9H0V9 348 aa14.32□□□□□ -0.12
VAPB-202ENST00000395802 CARD9Q9H257 536 aa14.32□□□□□ -0.12
VAPB-202ENST00000395802 IL37Q9NZH6 218 aa14.32□□□□□ -0.12
VAPB-202ENST00000395802 USTQ9Y2C2 406 aa14.32□□□□□ -0.12
VAPB-202ENST00000395802 PCDHA3Q9Y5H8 950 aa14.32□□□□□ -0.12
VAPB-202ENST00000395802 C2orf71A6NGG8 1288 aa14.31□□□□□ -0.12
VAPB-202ENST00000395802 KCNK3O14649 394 aa14.31□□□□□ -0.12
VAPB-202ENST00000395802 GJB6O95452 261 aa14.31□□□□□ -0.12
VAPB-202ENST00000395802 GLUD1P00367 558 aa14.31□□□□□ -0.12
VAPB-202ENST00000395802 F9P00740 461 aa14.31□□□□□ -0.12
VAPB-202ENST00000395802 NCAM1P13591 858 aa14.31□□□□□ -0.12
VAPB-202ENST00000395802 FLT3P36888 993 aa14.31□□□□□ -0.12
VAPB-202ENST00000395802 PAFAH1B1P43034 410 aa14.31□□□□□ -0.12
VAPB-202ENST00000395802 PPP3CCP48454 512 aa14.31□□□□□ -0.12
VAPB-202ENST00000395802 CDR1P51861 262 aa14.31□□□□□ -0.12
VAPB-202ENST00000395802 EPHB3P54753 998 aa14.31□□□□□ -0.12
VAPB-202ENST00000395802 CKAP4Q07065 602 aaKnown RBP14.31□□□□□ -0.12
VAPB-202ENST00000395802 GPM6BQ13491 265 aa14.31□□□□□ -0.12
VAPB-202ENST00000395802 DCAF6Q58WW2 860 aa14.31□□□□□ -0.12
VAPB-202ENST00000395802 BTBD8Q5XKL5 378 aa14.31□□□□□ -0.12
VAPB-202ENST00000395802 FAM109BQ6ICB4 259 aaPredicted RBP14.31□□□□□ -0.12
VAPB-202ENST00000395802 STRADAQ7RTN6 431 aa14.31□□□□□ -0.12
VAPB-202ENST00000395802 GPRIN1Q7Z2K8 1008 aa14.31□□□□□ -0.12
VAPB-202ENST00000395802 TADA2BQ86TJ2 420 aa14.31□□□□□ -0.12
VAPB-202ENST00000395802 PDZD8Q8NEN9 1154 aa14.31□□□□□ -0.12
VAPB-202ENST00000395802 CLEC4CQ8WTT0 213 aa14.31□□□□□ -0.12
VAPB-202ENST00000395802 OVCA2Q8WZ82 227 aa14.31□□□□□ -0.12
VAPB-202ENST00000395802 KLHL5Q96PQ7 755 aa14.31□□□□□ -0.12
VAPB-202ENST00000395802 SLC2A13Q96QE2 648 aa14.31□□□□□ -0.12
VAPB-202ENST00000395802 OSBPL9Q96SU4 736 aa14.31□□□□□ -0.12
VAPB-202ENST00000395802 CDK5RAP1Q96SZ6 601 aaKnown RBP14.31□□□□□ -0.12
VAPB-202ENST00000395802 NAP1L3Q99457 506 aaPredicted RBP14.31□□□□□ -0.12
VAPB-202ENST00000395802 TRIM7Q9C029 511 aa14.31□□□□□ -0.12
VAPB-202ENST00000395802 GOLPH3Q9H4A6 298 aa14.31□□□□□ -0.12
VAPB-202ENST00000395802 TLR8Q9NR97 1041 aaKnown RBP14.31□□□□□ -0.12
VAPB-202ENST00000395802 DDX56Q9NY93 547 aaKnown RBP14.31□□□□□ -0.12
VAPB-202ENST00000395802 MTUS1Q9ULD2 1270 aa14.31□□□□□ -0.12
VAPB-202ENST00000395802 ASB3Q9Y575 518 aa14.31□□□□□ -0.12
VAPB-202ENST00000395802 FAM92AA1XBS5 289 aa14.31□□□□□ -0.12
VAPB-202ENST00000395802 YJEFN3A6XGL0 299 aa14.31□□□□□ -0.12
VAPB-202ENST00000395802 E7ENQ6 273 aa14.31□□□□□ -0.12
VAPB-202ENST00000395802 DYNC1I1O14576 645 aa14.31□□□□□ -0.12
VAPB-202ENST00000395802 GBP1P32455 592 aa14.31□□□□□ -0.12
VAPB-202ENST00000395802 RGS19P49795 217 aa14.31□□□□□ -0.12
VAPB-202ENST00000395802 YWHAGP61981 247 aaKnown RBP eCLIP14.31□□□□□ -0.12
VAPB-202ENST00000395802 IFRD2Q12894 506 aaPredicted RBP14.31□□□□□ -0.12
VAPB-202ENST00000395802 TAF5Q15542 800 aa14.31□□□□□ -0.12
VAPB-202ENST00000395802 WHAMMP3Q1A5X7 153 aa14.31□□□□□ -0.12
VAPB-202ENST00000395802 CCDC14Q49A88 953 aa14.31□□□□□ -0.12
VAPB-202ENST00000395802 CCDC181Q5TID7 509 aa14.31□□□□□ -0.12
VAPB-202ENST00000395802 PLPP4Q5VZY2 271 aa14.31□□□□□ -0.12
VAPB-202ENST00000395802 BSPRYQ5W0U4 402 aa14.31□□□□□ -0.12
VAPB-202ENST00000395802 DEFB106AQ8N104 65 aa14.31□□□□□ -0.12
VAPB-202ENST00000395802 SCAMP5Q8TAC9 235 aa14.31□□□□□ -0.12
VAPB-202ENST00000395802 AUTS2Q8WXX7 1259 aa14.31□□□□□ -0.12
VAPB-202ENST00000395802 KHSRPQ92945 711 aaKnown RBP eCLIP14.31□□□□□ -0.12
VAPB-202ENST00000395802 CD101Q93033 1021 aa14.31□□□□□ -0.12
VAPB-202ENST00000395802 PIWIL1Q96J94 861 aaKnown RBP14.31□□□□□ -0.12
VAPB-202ENST00000395802 UXTQ9UBK9 157 aaPredicted RBP14.31□□□□□ -0.12
VAPB-202ENST00000395802 PACSIN2Q9UNF0 486 aaPredicted RBP14.31□□□□□ -0.12
VAPB-202ENST00000395802 FSCN2O14926 492 aa14.3□□□□□ -0.12
VAPB-202ENST00000395802 TGM5O43548 720 aa14.3□□□□□ -0.12
VAPB-202ENST00000395802 NCK2O43639 380 aa14.3□□□□□ -0.12
VAPB-202ENST00000395802 PRPSAP2O60256 369 aa14.3□□□□□ -0.12
VAPB-202ENST00000395802 VNN2O95498 520 aa14.3□□□□□ -0.12
VAPB-202ENST00000395802 RALAP11233 206 aa14.3□□□□□ -0.12
VAPB-202ENST00000395802 ERVFC1P60507 584 aa14.3□□□□□ -0.12
VAPB-202ENST00000395802 OGDHQ02218 1023 aa14.3□□□□□ -0.12
VAPB-202ENST00000395802 BOLA3Q53S33 107 aa14.3□□□□□ -0.12
VAPB-202ENST00000395802 ZFYVE27Q5T4F4 411 aa14.3□□□□□ -0.12
VAPB-202ENST00000395802 SND1Q7KZF4 910 aaKnown RBP eCLIP14.3□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms