RNA–Protein interactions for RNA: ENST00000394925.5

TRAF4-203, Transcript of TNF receptor associated factor 4, humanhuman

TSL 2

Gene TRAF4, Length 702 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-203ENST00000394925 MED10Q9BTT4 135 aa22.42■■□□□ 1.18
TRAF4-203ENST00000394925 GTPBP2Q9BX10 602 aaKnown RBP22.42■■□□□ 1.18
TRAF4-203ENST00000394925 TRIM9Q9C026 710 aa22.42■■□□□ 1.18
TRAF4-203ENST00000394925 CCSER2Q9H7U1 834 aa22.42■■□□□ 1.18
TRAF4-203ENST00000394925 KBTBD4Q9NVX7 518 aa22.42■■□□□ 1.18
TRAF4-203ENST00000394925 DEC1Q9P2X7 70 aa22.42■■□□□ 1.18
TRAF4-203ENST00000394925 DMXL2Q8TDJ6 3036 aa22.41■■□□□ 1.18
TRAF4-203ENST00000394925 DSPP15924 2871 aaKnown RBP22.41■■□□□ 1.18
TRAF4-203ENST00000394925 HOXC11O43248 304 aaPredicted RBP22.41■■□□□ 1.18
TRAF4-203ENST00000394925 AP5Z1O43299 807 aa22.41■■□□□ 1.18
TRAF4-203ENST00000394925 WASP42768 502 aa22.41■■□□□ 1.18
TRAF4-203ENST00000394925 RPL6Q02878 288 aaKnown RBP22.41■■□□□ 1.18
TRAF4-203ENST00000394925 C10orf76Q5T2E6 689 aa22.41■■□□□ 1.18
TRAF4-203ENST00000394925 TRMT11Q7Z4G4 463 aaKnown RBP22.41■■□□□ 1.18
TRAF4-203ENST00000394925 TMEM25Q86YD3 366 aa22.41■■□□□ 1.18
TRAF4-203ENST00000394925 NELFCDQ8IXH7 590 aa22.41■■□□□ 1.18
TRAF4-203ENST00000394925 XXYLT1Q8NBI6 393 aa22.41■■□□□ 1.18
TRAF4-203ENST00000394925 WBP2Q969T9 261 aa22.41■■□□□ 1.18
TRAF4-203ENST00000394925 SPHK2Q9NRA0 654 aa22.41■■□□□ 1.18
TRAF4-203ENST00000394925 ATP8B3O60423 1300 aa22.4■■□□□ 1.18
TRAF4-203ENST00000394925 TRIM24O15164 1050 aa22.4■■□□□ 1.18
TRAF4-203ENST00000394925 PHACTR2O75167 634 aa22.4■■□□□ 1.18
TRAF4-203ENST00000394925 STAU1O95793 577 aaKnown RBP22.4■■□□□ 1.18
TRAF4-203ENST00000394925 IRF1P10914 325 aa22.4■■□□□ 1.18
TRAF4-203ENST00000394925 GABRG2P18507 467 aa22.4■■□□□ 1.18
TRAF4-203ENST00000394925 SLC5A3P53794 718 aa22.4■■□□□ 1.18
TRAF4-203ENST00000394925 CDH8P55286 799 aa22.4■■□□□ 1.18
TRAF4-203ENST00000394925 SIM1P81133 766 aaPredicted RBP22.4■■□□□ 1.18
TRAF4-203ENST00000394925 SEMA3BQ13214 749 aa22.4■■□□□ 1.18
TRAF4-203ENST00000394925 E2F4Q16254 413 aa22.4■■□□□ 1.18
TRAF4-203ENST00000394925 DUOXA1Q1HG43 343 aa22.4■■□□□ 1.18
TRAF4-203ENST00000394925 PREPLQ4J6C6 727 aaPredicted RBP22.4■■□□□ 1.18
TRAF4-203ENST00000394925 FAM26FQ5R3K3 315 aa22.4■■□□□ 1.18
TRAF4-203ENST00000394925 PEAR1Q5VY43 1037 aaPredicted RBP22.4■■□□□ 1.18
TRAF4-203ENST00000394925 NUDT18Q6ZVK8 323 aa22.4■■□□□ 1.18
TRAF4-203ENST00000394925 PIP4P1Q86T03 277 aa22.4■■□□□ 1.18
TRAF4-203ENST00000394925 FAM35AQ86V20 835 aa22.4■■□□□ 1.18
TRAF4-203ENST00000394925 HDDC3Q8N4P3 179 aa22.4■■□□□ 1.18
TRAF4-203ENST00000394925 KCNV2Q8TDN2 545 aa22.4■■□□□ 1.18
TRAF4-203ENST00000394925 ZCCHC14Q8WYQ9 949 aaKnown RBP22.4■■□□□ 1.18
TRAF4-203ENST00000394925 SYAP1Q96A49 352 aaPredicted RBP22.4■■□□□ 1.18
TRAF4-203ENST00000394925 DHX58Q96C10 678 aa22.4■■□□□ 1.18
TRAF4-203ENST00000394925 XYLT2Q9H1B5 865 aa22.4■■□□□ 1.18
TRAF4-203ENST00000394925 SMYD3Q9H7B4 428 aa22.4■■□□□ 1.18
TRAF4-203ENST00000394925 GMIPQ9P107 970 aa22.4■■□□□ 1.18
TRAF4-203ENST00000394925 SLC6A14Q9UN76 642 aa22.4■■□□□ 1.18
TRAF4-203ENST00000394925 SRRM3A6NNA2 597 aaPredicted RBP22.39■■□□□ 1.17
TRAF4-203ENST00000394925 CLSTN1O94985 981 aa22.39■■□□□ 1.17
TRAF4-203ENST00000394925 HOXB2P14652 356 aa22.39■■□□□ 1.17
TRAF4-203ENST00000394925 ATICP31939 592 aa22.39■■□□□ 1.17
TRAF4-203ENST00000394925 HOXD12P35452 270 aa22.39■■□□□ 1.17
TRAF4-203ENST00000394925 AMPD3Q01432 767 aa22.39■■□□□ 1.17
TRAF4-203ENST00000394925 GFPT1Q06210 699 aaPredicted RBP22.39■■□□□ 1.17
TRAF4-203ENST00000394925 STK38Q15208 465 aa22.39■■□□□ 1.17
TRAF4-203ENST00000394925 SNX30Q5VWJ9 437 aa22.39■■□□□ 1.17
TRAF4-203ENST00000394925 SLC36A4Q6YBV0 504 aa22.39■■□□□ 1.17
TRAF4-203ENST00000394925 PAQR9Q6ZVX9 377 aa22.39■■□□□ 1.17
TRAF4-203ENST00000394925 TERB1Q8NA31 727 aa22.39■■□□□ 1.17
TRAF4-203ENST00000394925 CEP76Q8TAP6 659 aa22.39■■□□□ 1.17
TRAF4-203ENST00000394925 NACA2Q9H009 215 aa22.39■■□□□ 1.17
TRAF4-203ENST00000394925 GZF1Q9H116 711 aaPredicted RBP22.39■■□□□ 1.17
TRAF4-203ENST00000394925 DMAP1Q9NPF5 467 aaPredicted RBP22.39■■□□□ 1.17
TRAF4-203ENST00000394925 CALCOCO1Q9P1Z2 691 aa22.39■■□□□ 1.17
TRAF4-203ENST00000394925 KLK13Q9UKR3 277 aa22.39■■□□□ 1.17
TRAF4-203ENST00000394925 HCN2Q9UL51 889 aa22.39■■□□□ 1.17
TRAF4-203ENST00000394925 NEUROG3Q9Y4Z2 214 aa22.39■■□□□ 1.17
TRAF4-203ENST00000394925 MYH10P35580 1976 aa22.39■■□□□ 1.17
TRAF4-203ENST00000394925 NTSR1P30989 418 aa22.38■■□□□ 1.17
TRAF4-203ENST00000394925 ZNF33AQ06730 810 aa22.38■■□□□ 1.17
TRAF4-203ENST00000394925 MIB1Q86YT6 1006 aa22.38■■□□□ 1.17
TRAF4-203ENST00000394925 SCFD1Q8WVM8 642 aa22.38■■□□□ 1.17
TRAF4-203ENST00000394925 ERLEC1Q96DZ1 483 aa22.38■■□□□ 1.17
TRAF4-203ENST00000394925 CUEDC2Q9H467 287 aa22.38■■□□□ 1.17
TRAF4-203ENST00000394925 IL37Q9NZH6 218 aa22.38■■□□□ 1.17
TRAF4-203ENST00000394925 MTMR6Q9Y217 621 aa22.38■■□□□ 1.17
TRAF4-203ENST00000394925 UPK3BL1B0FP48 263 aa22.37■■□□□ 1.17
TRAF4-203ENST00000394925 UPK3BL2E5RIL1 263 aa22.37■■□□□ 1.17
TRAF4-203ENST00000394925 SERPINF2P08697 491 aa22.37■■□□□ 1.17
TRAF4-203ENST00000394925 NASPP49321 788 aaPredicted RBP22.37■■□□□ 1.17
TRAF4-203ENST00000394925 CASP4P49662 377 aa22.37■■□□□ 1.17
TRAF4-203ENST00000394925 TUBP50607 506 aa22.37■■□□□ 1.17
TRAF4-203ENST00000394925 SNRPFP62306 86 aaKnown RBP22.37■■□□□ 1.17
TRAF4-203ENST00000394925 BIRC3Q13489 604 aa22.37■■□□□ 1.17
TRAF4-203ENST00000394925 EGFLAMQ63HQ2 1017 aa22.37■■□□□ 1.17
TRAF4-203ENST00000394925 SCARA5Q6ZMJ2 495 aa22.37■■□□□ 1.17
TRAF4-203ENST00000394925 LINC00301Q8NCQ3 95 aa22.37■■□□□ 1.17
TRAF4-203ENST00000394925 ELMO3Q96BJ8 720 aa22.37■■□□□ 1.17
TRAF4-203ENST00000394925 SMARCD1Q96GM5 515 aa22.37■■□□□ 1.17
TRAF4-203ENST00000394925 CAPN10Q9HC96 672 aa22.37■■□□□ 1.17
TRAF4-203ENST00000394925 DNAJC17Q9NVM6 304 aaKnown RBP22.37■■□□□ 1.17
TRAF4-203ENST00000394925 MSRB2Q9Y3D2 182 aa22.37■■□□□ 1.17
TRAF4-203ENST00000394925 UBE4BO95155 1302 aa22.36■■□□□ 1.17
TRAF4-203ENST00000394925 IGHV1OR15-9A0A0B4J2B8 117 aa22.36■■□□□ 1.17
TRAF4-203ENST00000394925 A0A1W2PQF6 199 aa22.36■■□□□ 1.17
TRAF4-203ENST00000394925 ZBTB24O43167 697 aaPredicted RBP22.36■■□□□ 1.17
TRAF4-203ENST00000394925 OPHN1O60890 802 aa22.36■■□□□ 1.17
TRAF4-203ENST00000394925 AP1G2O75843 785 aa22.36■■□□□ 1.17
TRAF4-203ENST00000394925 ZDHHC11BP0C7U3 371 aa22.36■■□□□ 1.17
TRAF4-203ENST00000394925 HOXB3P14651 431 aaPredicted RBP22.36■■□□□ 1.17
TRAF4-203ENST00000394925 PGFP49763 221 aa22.36■■□□□ 1.17
Retrieved 100 of 20,778 RNA–protein pairs in 132.9 ms