RNA–Protein interactions for RNA: ENST00000394848.5

SSH2-203, Transcript of slingshot protein phosphatase 2, humanhuman

TSL 1 (best)

Gene SSH2, Length 1,796 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSH2-203ENST00000394848 FAM35AQ86V20 835 aa13.16□□□□□ -0.3
SSH2-203ENST00000394848 COLGALT2Q8IYK4 626 aa13.16□□□□□ -0.3
SSH2-203ENST00000394848 ABI1Q8IZP0 508 aa13.16□□□□□ -0.3
SSH2-203ENST00000394848 GRK7Q8WTQ7 553 aa13.16□□□□□ -0.3
SSH2-203ENST00000394848 FAM172AQ8WUF8 416 aa13.16□□□□□ -0.3
SSH2-203ENST00000394848 TOP1MTQ969P6 601 aa13.16□□□□□ -0.3
SSH2-203ENST00000394848 SMOQ99835 787 aa13.16□□□□□ -0.3
SSH2-203ENST00000394848 FAM118BQ9BPY3 351 aa13.16□□□□□ -0.3
SSH2-203ENST00000394848 RAB6CQ9H0N0 254 aa13.16□□□□□ -0.3
SSH2-203ENST00000394848 NEUROG2Q9H2A3 272 aa13.16□□□□□ -0.3
SSH2-203ENST00000394848 NGRNQ9NPE2 291 aaKnown RBP13.16□□□□□ -0.3
SSH2-203ENST00000394848 RANBP2P49792 3224 aaKnown RBP13.16□□□□□ -0.3
SSH2-203ENST00000394848 TNRC18O15417 2968 aaPredicted RBP13.15□□□□□ -0.3
SSH2-203ENST00000394848 LTBP2Q14767 1821 aa13.15□□□□□ -0.3
SSH2-203ENST00000394848 B4GALT3O60512 393 aa13.15□□□□□ -0.3
SSH2-203ENST00000394848 AMHP03971 560 aa13.15□□□□□ -0.3
SSH2-203ENST00000394848 TYMPP19971 482 aa13.15□□□□□ -0.3
SSH2-203ENST00000394848 GBP1P32455 592 aa13.15□□□□□ -0.3
SSH2-203ENST00000394848 PTPN9P43378 593 aa13.15□□□□□ -0.3
SSH2-203ENST00000394848 NDUFV1P49821 464 aa13.15□□□□□ -0.3
SSH2-203ENST00000394848 MRPS5P82675 430 aaKnown RBP13.15□□□□□ -0.3
SSH2-203ENST00000394848 TAZQ16635 292 aa13.15□□□□□ -0.3
SSH2-203ENST00000394848 INTS6LQ5JSJ4 861 aaKnown RBP13.15□□□□□ -0.3
SSH2-203ENST00000394848 RASIP1Q5U651 963 aa13.15□□□□□ -0.3
SSH2-203ENST00000394848 NPAS4Q8IUM7 802 aa13.15□□□□□ -0.3
SSH2-203ENST00000394848 SIX6OS1Q8N1H7 587 aa13.15□□□□□ -0.3
SSH2-203ENST00000394848 CCDC114Q96M63 670 aa13.15□□□□□ -0.3
SSH2-203ENST00000394848 PEBP4Q96S96 227 aa13.15□□□□□ -0.3
SSH2-203ENST00000394848 KCNK16Q96T55 309 aa13.15□□□□□ -0.3
SSH2-203ENST00000394848 GDF15Q99988 308 aa13.15□□□□□ -0.3
SSH2-203ENST00000394848 DDX23Q9BUQ8 820 aaKnown RBP13.15□□□□□ -0.3
SSH2-203ENST00000394848 UBXN6Q9BZV1 441 aa13.15□□□□□ -0.3
SSH2-203ENST00000394848 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP13.15□□□□□ -0.3
SSH2-203ENST00000394848 LRFN2Q9ULH4 789 aa13.15□□□□□ -0.3
SSH2-203ENST00000394848 PCDHB8Q9UN66 801 aa13.15□□□□□ -0.3
SSH2-203ENST00000394848 LIASO43766 372 aa13.15□□□□□ -0.31
SSH2-203ENST00000394848 HSF2BPO75031 334 aa13.15□□□□□ -0.31
SSH2-203ENST00000394848 GAS8O95995 478 aa13.15□□□□□ -0.31
SSH2-203ENST00000394848 CD48P09326 243 aa13.15□□□□□ -0.31
SSH2-203ENST00000394848 RPL21P46778 160 aaKnown RBP13.15□□□□□ -0.31
SSH2-203ENST00000394848 TKTL1P51854 596 aa13.15□□□□□ -0.31
SSH2-203ENST00000394848 YWHAZP63104 245 aaKnown RBP13.15□□□□□ -0.31
SSH2-203ENST00000394848 LMNB2Q03252 620 aa13.15□□□□□ -0.31
SSH2-203ENST00000394848 KRT17Q04695 432 aa13.15□□□□□ -0.31
SSH2-203ENST00000394848 ADCY1Q08828 1119 aa13.15□□□□□ -0.31
SSH2-203ENST00000394848 CYP4V2Q6ZWL3 525 aaPredicted RBP13.15□□□□□ -0.31
SSH2-203ENST00000394848 MREGQ8N565 214 aa13.15□□□□□ -0.31
SSH2-203ENST00000394848 TSEN2Q8NCE0 465 aaKnown RBP13.15□□□□□ -0.31
SSH2-203ENST00000394848 NDRG1Q92597 394 aaKnown RBP13.15□□□□□ -0.31
SSH2-203ENST00000394848 CENPIQ92674 756 aaPredicted RBP13.15□□□□□ -0.31
SSH2-203ENST00000394848 FAM149B1Q96BN6 582 aa13.15□□□□□ -0.31
SSH2-203ENST00000394848 ZBTB9Q96C00 473 aa13.15□□□□□ -0.31
SSH2-203ENST00000394848 SMARCD1Q96GM5 515 aa13.15□□□□□ -0.31
SSH2-203ENST00000394848 CALN1Q9BXU9 219 aa13.15□□□□□ -0.31
SSH2-203ENST00000394848 STAU2Q9NUL3 570 aaKnown RBP eCLIP13.15□□□□□ -0.31
SSH2-203ENST00000394848 CXXC1Q9P0U4 656 aaPredicted RBP13.15□□□□□ -0.31
SSH2-203ENST00000394848 DNAJB4Q9UDY4 337 aa13.15□□□□□ -0.31
SSH2-203ENST00000394848 TMEM189-UBE2V1I3L0A0 370 aa13.14□□□□□ -0.31
SSH2-203ENST00000394848 HOXA2O43364 376 aa13.14□□□□□ -0.31
SSH2-203ENST00000394848 TRAPPC3O43617 180 aa13.14□□□□□ -0.31
SSH2-203ENST00000394848 CST8O60676 142 aa13.14□□□□□ -0.31
SSH2-203ENST00000394848 TADA2AO75478 443 aa13.14□□□□□ -0.31
SSH2-203ENST00000394848 ENDOD1O94919 500 aa13.14□□□□□ -0.31
SSH2-203ENST00000394848 FBXO21O94952 628 aa13.14□□□□□ -0.31
SSH2-203ENST00000394848 TFE3P19532 575 aaPredicted RBP13.14□□□□□ -0.31
SSH2-203ENST00000394848 MATKP42679 507 aa13.14□□□□□ -0.31
SSH2-203ENST00000394848 PLTPP55058 493 aa13.14□□□□□ -0.31
SSH2-203ENST00000394848 CDH6P55285 790 aa13.14□□□□□ -0.31
SSH2-203ENST00000394848 HDAC4P56524 1084 aa13.14□□□□□ -0.31
SSH2-203ENST00000394848 DEFB103AP81534 67 aa13.14□□□□□ -0.31
SSH2-203ENST00000394848 YWHAHQ04917 246 aaPredicted RBP13.14□□□□□ -0.31
SSH2-203ENST00000394848 BYSLQ13895 437 aaKnown RBP13.14□□□□□ -0.31
SSH2-203ENST00000394848 MAPRE1Q15691 268 aaKnown RBP13.14□□□□□ -0.31
SSH2-203ENST00000394848 ALS2CLQ60I27 953 aa13.14□□□□□ -0.31
SSH2-203ENST00000394848 DRICH1Q6PGQ1 229 aaPredicted RBP13.14□□□□□ -0.31
SSH2-203ENST00000394848 LRRTM3Q86VH5 581 aa13.14□□□□□ -0.31
SSH2-203ENST00000394848 MAP7D3Q8IWC1 876 aa13.14□□□□□ -0.31
SSH2-203ENST00000394848 DEFB106AQ8N104 65 aa13.14□□□□□ -0.31
SSH2-203ENST00000394848 OR10T2Q8NGX3 314 aa13.14□□□□□ -0.31
SSH2-203ENST00000394848 PHOSPHO2Q8TCD6 241 aa13.14□□□□□ -0.31
SSH2-203ENST00000394848 TEKT4Q8WW24 435 aa13.14□□□□□ -0.31
SSH2-203ENST00000394848 MYLPFQ96A32 169 aa13.14□□□□□ -0.31
SSH2-203ENST00000394848 TBCBQ99426 244 aa13.14□□□□□ -0.31
SSH2-203ENST00000394848 C11orf84Q9BUA3 381 aaPredicted RBP13.14□□□□□ -0.31
SSH2-203ENST00000394848 MAK16Q9BXY0 300 aaKnown RBP13.14□□□□□ -0.31
SSH2-203ENST00000394848 MTIF3Q9H2K0 278 aaKnown RBP13.14□□□□□ -0.31
SSH2-203ENST00000394848 CSNK1G1Q9HCP0 422 aa13.14□□□□□ -0.31
SSH2-203ENST00000394848 ZDHHC18Q9NUE0 388 aa13.14□□□□□ -0.31
SSH2-203ENST00000394848 GRHL1Q9NZI5 618 aa13.14□□□□□ -0.31
SSH2-203ENST00000394848 DRG1Q9Y295 367 aaKnown RBP13.14□□□□□ -0.31
SSH2-203ENST00000394848 PRG3Q9Y2Y8 225 aaPredicted RBP13.14□□□□□ -0.31
SSH2-203ENST00000394848 GOLGA6BA6NDN3 693 aa13.13□□□□□ -0.31
SSH2-203ENST00000394848 ZBBXA8MT70 800 aa13.13□□□□□ -0.31
SSH2-203ENST00000394848 DGKIO75912 1065 aa13.13□□□□□ -0.31
SSH2-203ENST00000394848 BDNFP23560 247 aa13.13□□□□□ -0.31
SSH2-203ENST00000394848 HSPA9P38646 679 aaKnown RBP13.13□□□□□ -0.31
SSH2-203ENST00000394848 ARSEP51690 589 aa13.13□□□□□ -0.31
SSH2-203ENST00000394848 RABGGTBP53611 331 aa13.13□□□□□ -0.31
SSH2-203ENST00000394848 CACNA2D1P54289 1103 aa13.13□□□□□ -0.31
SSH2-203ENST00000394848 DYNLT1P63172 113 aa13.13□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 75.3 ms