RNA–Protein interactions for RNA: ENST00000394633.7

PCDHA1-202, Transcript of protocadherin alpha 1, humanhuman

TSL 1 (best) BASIC

Gene PCDHA1, Length 2,204 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA1-202ENST00000394633 RCN1Q15293 331 aa19.1■□□□□ 0.65
PCDHA1-202ENST00000394633 DARS2Q6PI48 645 aaKnown RBP19.1■□□□□ 0.65
PCDHA1-202ENST00000394633 CDHR3Q6ZTQ4 885 aa19.1■□□□□ 0.65
PCDHA1-202ENST00000394633 ZC3H18Q86VM9 953 aaKnown RBP19.1■□□□□ 0.65
PCDHA1-202ENST00000394633 DDX51Q8N8A6 666 aaKnown RBP eCLIP19.1■□□□□ 0.65
PCDHA1-202ENST00000394633 CFAP61Q8NHU2 1237 aa19.1■□□□□ 0.65
PCDHA1-202ENST00000394633 PTPN18Q99952 460 aa19.1■□□□□ 0.65
PCDHA1-202ENST00000394633 SDCBP2Q9H190 292 aa19.1■□□□□ 0.65
PCDHA1-202ENST00000394633 TAS2R1Q9NYW7 299 aa19.1■□□□□ 0.65
PCDHA1-202ENST00000394633 WDR35Q9P2L0 1181 aa19.1■□□□□ 0.65
PCDHA1-202ENST00000394633 USP18Q9UMW8 372 aa19.1■□□□□ 0.65
PCDHA1-202ENST00000394633 DPPA5A6NC42 116 aa19.1■□□□□ 0.65
PCDHA1-202ENST00000394633 DCAF8L1A6NGE4 600 aa19.1■□□□□ 0.65
PCDHA1-202ENST00000394633 UPP2O95045 317 aa19.1■□□□□ 0.65
PCDHA1-202ENST00000394633 SRGAP2CP0DJJ0 459 aa19.1■□□□□ 0.65
PCDHA1-202ENST00000394633 MYL2P10916 166 aa19.1■□□□□ 0.65
PCDHA1-202ENST00000394633 UBA1P22314 1058 aaKnown RBP19.1■□□□□ 0.65
PCDHA1-202ENST00000394633 GTF2A2P52657 109 aa19.1■□□□□ 0.65
PCDHA1-202ENST00000394633 MUM1Q2TAK8 710 aa19.1■□□□□ 0.65
PCDHA1-202ENST00000394633 TMEM130Q8N3G9 435 aa19.1■□□□□ 0.65
PCDHA1-202ENST00000394633 NRG4Q8WWG1 115 aa19.1■□□□□ 0.65
PCDHA1-202ENST00000394633 SYNCQ9H7C4 482 aa19.1■□□□□ 0.65
PCDHA1-202ENST00000394633 RSAD1Q9HA92 442 aa19.1■□□□□ 0.65
PCDHA1-202ENST00000394633 FCHO1O14526 889 aa19.09■□□□□ 0.65
PCDHA1-202ENST00000394633 NVLO15381 856 aaKnown RBP19.09■□□□□ 0.65
PCDHA1-202ENST00000394633 FARP2O94887 1054 aaPredicted RBP19.09■□□□□ 0.65
PCDHA1-202ENST00000394633 VHLP40337 213 aa19.09■□□□□ 0.65
PCDHA1-202ENST00000394633 WDR60Q8WVS4 1066 aa19.09■□□□□ 0.65
PCDHA1-202ENST00000394633 CFAP36Q96G28 342 aa19.09■□□□□ 0.65
PCDHA1-202ENST00000394633 OXNAD1Q96HP4 312 aaPredicted RBP19.09■□□□□ 0.65
PCDHA1-202ENST00000394633 ARHGEF4Q9NR80 690 aa19.09■□□□□ 0.65
PCDHA1-202ENST00000394633 TTLL3Q9Y4R7 772 aa19.09■□□□□ 0.65
PCDHA1-202ENST00000394633 BRCA2P51587 3418 aa19.09■□□□□ 0.65
PCDHA1-202ENST00000394633 FAM237BA0A1B0GVD1 139 aa19.09■□□□□ 0.65
PCDHA1-202ENST00000394633 RNF8O76064 485 aa19.09■□□□□ 0.65
PCDHA1-202ENST00000394633 TNNC2P02585 160 aa19.09■□□□□ 0.65
PCDHA1-202ENST00000394633 PGK2P07205 417 aa19.09■□□□□ 0.65
PCDHA1-202ENST00000394633 ESRRAP11474 423 aaPredicted RBP19.09■□□□□ 0.65
PCDHA1-202ENST00000394633 STIP1P31948 543 aaKnown RBP19.09■□□□□ 0.65
PCDHA1-202ENST00000394633 TUBP50607 506 aa19.09■□□□□ 0.65
PCDHA1-202ENST00000394633 STAT5BP51692 787 aa19.09■□□□□ 0.65
PCDHA1-202ENST00000394633 OSTNP61366 133 aa19.09■□□□□ 0.65
PCDHA1-202ENST00000394633 MRPS35P82673 323 aaKnown RBP19.09■□□□□ 0.65
PCDHA1-202ENST00000394633 CCDC6Q16204 474 aa19.09■□□□□ 0.65
PCDHA1-202ENST00000394633 VPS52Q8N1B4 723 aa19.09■□□□□ 0.65
PCDHA1-202ENST00000394633 MCUR1Q96AQ8 359 aa19.09■□□□□ 0.65
PCDHA1-202ENST00000394633 TWNKQ96RR1 684 aa19.09■□□□□ 0.65
PCDHA1-202ENST00000394633 SRPK1Q96SB4 655 aaKnown RBP19.09■□□□□ 0.65
PCDHA1-202ENST00000394633 BCO2Q9BYV7 579 aa19.09■□□□□ 0.65
PCDHA1-202ENST00000394633 PNPLA8Q9NP80 782 aa19.09■□□□□ 0.65
PCDHA1-202ENST00000394633 TRIM49D1C9J1S8 452 aa19.08■□□□□ 0.65
PCDHA1-202ENST00000394633 KLF11O14901 512 aa19.08■□□□□ 0.65
PCDHA1-202ENST00000394633 CHADO15335 359 aa19.08■□□□□ 0.65
PCDHA1-202ENST00000394633 SPAG6O75602 509 aa19.08■□□□□ 0.65
PCDHA1-202ENST00000394633 ENDOD1O94919 500 aa19.08■□□□□ 0.65
PCDHA1-202ENST00000394633 CHRM1P11229 460 aaPredicted RBP19.08■□□□□ 0.65
PCDHA1-202ENST00000394633 YWHAZP63104 245 aaKnown RBP19.08■□□□□ 0.65
PCDHA1-202ENST00000394633 LAMTOR4Q0VGL1 99 aa19.08■□□□□ 0.65
PCDHA1-202ENST00000394633 RAB6CQ53S08 254 aa19.08■□□□□ 0.65
PCDHA1-202ENST00000394633 SH3PXD2AQ5TCZ1 1133 aa19.08■□□□□ 0.65
PCDHA1-202ENST00000394633 NAIF1Q69YI7 327 aaPredicted RBP19.08■□□□□ 0.65
PCDHA1-202ENST00000394633 CCDC62Q6P9F0 684 aa19.08■□□□□ 0.65
PCDHA1-202ENST00000394633 CYP4V2Q6ZWL3 525 aaPredicted RBP19.08■□□□□ 0.65
PCDHA1-202ENST00000394633 CEP120Q8N960 986 aa19.08■□□□□ 0.65
PCDHA1-202ENST00000394633 SLC4A11Q8NBS3 891 aa19.08■□□□□ 0.65
PCDHA1-202ENST00000394633 FAF2Q96CS3 445 aa19.08■□□□□ 0.65
PCDHA1-202ENST00000394633 MCRS1Q96EZ8 462 aa19.08■□□□□ 0.65
PCDHA1-202ENST00000394633 ANKRD36BP1Q96IX9 119 aa19.08■□□□□ 0.65
PCDHA1-202ENST00000394633 NMUR2Q9GZQ4 415 aa19.08■□□□□ 0.65
PCDHA1-202ENST00000394633 RAB6CQ9H0N0 254 aa19.08■□□□□ 0.65
PCDHA1-202ENST00000394633 HMGXB4Q9UGU5 601 aa19.08■□□□□ 0.65
PCDHA1-202ENST00000394633 MCM3APO60318 1980 aa19.08■□□□□ 0.65
PCDHA1-202ENST00000394633 COPEO14579 308 aa19.08■□□□□ 0.64
PCDHA1-202ENST00000394633 PSMG1O95456 288 aa19.08■□□□□ 0.64
PCDHA1-202ENST00000394633 KRT19P08727 400 aa19.08■□□□□ 0.64
PCDHA1-202ENST00000394633 RARBP10826 455 aa19.08■□□□□ 0.64
PCDHA1-202ENST00000394633 WDR78Q5VTH9 848 aa19.08■□□□□ 0.64
PCDHA1-202ENST00000394633 TTC39BQ5VTQ0 682 aaPredicted RBP19.08■□□□□ 0.64
PCDHA1-202ENST00000394633 SNX30Q5VWJ9 437 aa19.08■□□□□ 0.64
PCDHA1-202ENST00000394633 FAM91A1Q658Y4 838 aa19.08■□□□□ 0.64
PCDHA1-202ENST00000394633 ALYREFQ86V81 257 aaKnown RBP19.08■□□□□ 0.64
PCDHA1-202ENST00000394633 SLC26A11Q86WA9 606 aa19.08■□□□□ 0.64
PCDHA1-202ENST00000394633 PPM1NQ8N819 430 aa19.08■□□□□ 0.64
PCDHA1-202ENST00000394633 RNF149Q8NC42 400 aa19.08■□□□□ 0.64
PCDHA1-202ENST00000394633 ARMC2Q8NEN0 867 aa19.08■□□□□ 0.64
PCDHA1-202ENST00000394633 FAM136AQ96C01 138 aa19.08■□□□□ 0.64
PCDHA1-202ENST00000394633 LBHD1Q9BQE6 289 aaPredicted RBP19.08■□□□□ 0.64
PCDHA1-202ENST00000394633 YIPF3Q9GZM5 350 aa19.08■□□□□ 0.64
PCDHA1-202ENST00000394633 ARMCX1Q9P291 453 aa19.08■□□□□ 0.64
PCDHA1-202ENST00000394633 SOWAHBA6NEL2 793 aa19.07■□□□□ 0.64
PCDHA1-202ENST00000394633 CXorf49A8MYA2 514 aaPredicted RBP19.07■□□□□ 0.64
PCDHA1-202ENST00000394633 B4GALT4O60513 344 aa19.07■□□□□ 0.64
PCDHA1-202ENST00000394633 MICAL2O94851 1124 aa19.07■□□□□ 0.64
PCDHA1-202ENST00000394633 PROZP22891 400 aa19.07■□□□□ 0.64
PCDHA1-202ENST00000394633 CDH6P55285 790 aa19.07■□□□□ 0.64
PCDHA1-202ENST00000394633 KLC1Q07866 573 aa19.07■□□□□ 0.64
PCDHA1-202ENST00000394633 ACAP1Q15027 740 aa19.07■□□□□ 0.64
PCDHA1-202ENST00000394633 IER5Q5VY09 327 aa19.07■□□□□ 0.64
PCDHA1-202ENST00000394633 DNERQ8NFT8 737 aa19.07■□□□□ 0.64
PCDHA1-202ENST00000394633 MECRQ9BV79 373 aa19.07■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms