RNA–Protein interactions for RNA: ENST00000394440.7

CCT4-201, Transcript of chaperonin containing TCP1 subunit 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCT4, Length 2,520 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCT4-201ENST00000394440 MYLPFQ96A32 169 aa15.63■□□□□ 0.09
CCT4-201ENST00000394440 SNRNP25Q9BV90 132 aaKnown RBP15.63■□□□□ 0.09
CCT4-201ENST00000394440 FNDC1Q4ZHG4 1894 aaPredicted RBP15.63■□□□□ 0.09
CCT4-201ENST00000394440 MICAL3Q7RTP6 2002 aa15.63■□□□□ 0.09
CCT4-201ENST00000394440 HHLA1C9JL84 531 aa15.63■□□□□ 0.09
CCT4-201ENST00000394440 CCL5P13501 91 aa15.63■□□□□ 0.09
CCT4-201ENST00000394440 MATKP42679 507 aa15.63■□□□□ 0.09
CCT4-201ENST00000394440 CDH6P55285 790 aa15.63■□□□□ 0.09
CCT4-201ENST00000394440 LMNB2Q03252 620 aa15.63■□□□□ 0.09
CCT4-201ENST00000394440 STRADAQ7RTN6 431 aa15.63■□□□□ 0.09
CCT4-201ENST00000394440 OR10T2Q8NGX3 314 aa15.63■□□□□ 0.09
CCT4-201ENST00000394440 URGCPQ8TCY9 931 aa15.63■□□□□ 0.09
CCT4-201ENST00000394440 NT5C3BQ969T7 300 aa15.63■□□□□ 0.09
CCT4-201ENST00000394440 SMARCD1Q96GM5 515 aa15.63■□□□□ 0.09
CCT4-201ENST00000394440 FRMD8P1Q9BZ68 369 aaPredicted RBP15.63■□□□□ 0.09
CCT4-201ENST00000394440 LRRC4Q9HBW1 653 aa15.63■□□□□ 0.09
CCT4-201ENST00000394440 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP15.63■□□□□ 0.09
CCT4-201ENST00000394440 KANSL3Q9P2N6 904 aa15.63■□□□□ 0.09
CCT4-201ENST00000394440 ASIC3Q9UHC3 531 aa15.63■□□□□ 0.09
CCT4-201ENST00000394440 ARHGEF37A1IGU5 675 aa15.62■□□□□ 0.09
CCT4-201ENST00000394440 ENPP3O14638 875 aa15.62■□□□□ 0.09
CCT4-201ENST00000394440 ITGAVP06756 1048 aa15.62■□□□□ 0.09
CCT4-201ENST00000394440 DESP17661 470 aa15.62■□□□□ 0.09
CCT4-201ENST00000394440 NDUFV1P49821 464 aa15.62■□□□□ 0.09
CCT4-201ENST00000394440 DHX9Q08211 1270 aaKnown RBP15.62■□□□□ 0.09
CCT4-201ENST00000394440 MTMR3Q13615 1198 aa15.62■□□□□ 0.09
CCT4-201ENST00000394440 PDK2Q15119 407 aa15.62■□□□□ 0.09
CCT4-201ENST00000394440 OTUD1Q5VV17 481 aaPredicted RBP15.62■□□□□ 0.09
CCT4-201ENST00000394440 OVOS1Q6IE37 1185 aa15.62■□□□□ 0.09
CCT4-201ENST00000394440 ALLCQ8N6M5 410 aa15.62■□□□□ 0.09
CCT4-201ENST00000394440 TTC13Q8NBP0 860 aa15.62■□□□□ 0.09
CCT4-201ENST00000394440 ACTL9Q8TC94 416 aa15.62■□□□□ 0.09
CCT4-201ENST00000394440 NDRG1Q92597 394 aaKnown RBP15.62■□□□□ 0.09
CCT4-201ENST00000394440 SNF8Q96H20 258 aa15.62■□□□□ 0.09
CCT4-201ENST00000394440 KCNK16Q96T55 309 aa15.62■□□□□ 0.09
CCT4-201ENST00000394440 PCDHB8Q9UN66 801 aa15.62■□□□□ 0.09
CCT4-201ENST00000394440 H0YGN5 161 aa15.62■□□□□ 0.09
CCT4-201ENST00000394440 APOC4-APOC2K7ER74 178 aa15.62■□□□□ 0.09
CCT4-201ENST00000394440 APOC2P02655 101 aa15.62■□□□□ 0.09
CCT4-201ENST00000394440 ITIH2P19823 946 aa15.62■□□□□ 0.09
CCT4-201ENST00000394440 IL4RP24394 825 aa15.62■□□□□ 0.09
CCT4-201ENST00000394440 MNX1P50219 401 aaPredicted RBP15.62■□□□□ 0.09
CCT4-201ENST00000394440 TKTL1P51854 596 aa15.62■□□□□ 0.09
CCT4-201ENST00000394440 OTUD4Q01804 1114 aaKnown RBP15.62■□□□□ 0.09
CCT4-201ENST00000394440 TCTN1Q2MV58 587 aa15.62■□□□□ 0.09
CCT4-201ENST00000394440 GPRIN1Q7Z2K8 1008 aa15.62■□□□□ 0.09
CCT4-201ENST00000394440 DEFB106AQ8N104 65 aa15.62■□□□□ 0.09
CCT4-201ENST00000394440 CCDC89Q8N998 374 aa15.62■□□□□ 0.09
CCT4-201ENST00000394440 HAUS1Q96CS2 278 aa15.62■□□□□ 0.09
CCT4-201ENST00000394440 SLC2A13Q96QE2 648 aa15.62■□□□□ 0.09
CCT4-201ENST00000394440 CALN1Q9BXU9 219 aa15.62■□□□□ 0.09
CCT4-201ENST00000394440 RNF208Q9H0X6 261 aa15.62■□□□□ 0.09
CCT4-201ENST00000394440 PCDH18Q9HCL0 1135 aa15.62■□□□□ 0.09
CCT4-201ENST00000394440 TMLHEQ9NVH6 421 aa15.62■□□□□ 0.09
CCT4-201ENST00000394440 CALCOCO1Q9P1Z2 691 aa15.62■□□□□ 0.09
CCT4-201ENST00000394440 NFS1Q9Y697 457 aa15.62■□□□□ 0.09
CCT4-201ENST00000394440 ZNF638Q14966 1978 aaKnown RBP15.62■□□□□ 0.09
CCT4-201ENST00000394440 ZNF487B1APH4 448 aa15.61■□□□□ 0.09
CCT4-201ENST00000394440 RNF40O75150 1001 aa15.61■□□□□ 0.09
CCT4-201ENST00000394440 FBXO21O94952 628 aa15.61■□□□□ 0.09
CCT4-201ENST00000394440 MYCP01106 439 aaPredicted RBP15.61■□□□□ 0.09
CCT4-201ENST00000394440 CDR1P51861 262 aa15.61■□□□□ 0.09
CCT4-201ENST00000394440 DAOAP59103 153 aa15.61■□□□□ 0.09
CCT4-201ENST00000394440 YWHAZP63104 245 aaKnown RBP15.61■□□□□ 0.09
CCT4-201ENST00000394440 FAM193AP78312 1265 aa15.61■□□□□ 0.09
CCT4-201ENST00000394440 CALCOCO2Q13137 446 aa15.61■□□□□ 0.09
CCT4-201ENST00000394440 MMRN1Q13201 1228 aa15.61■□□□□ 0.09
CCT4-201ENST00000394440 CA9Q16790 459 aa15.61■□□□□ 0.09
CCT4-201ENST00000394440 SLC25A52Q3SY17 297 aa15.61■□□□□ 0.09
CCT4-201ENST00000394440 ZC3H12AQ5D1E8 599 aaKnown RBP15.61■□□□□ 0.09
CCT4-201ENST00000394440 SCYL2Q6P3W7 929 aa15.61■□□□□ 0.09
CCT4-201ENST00000394440 ZNF365Q70YC5 407 aa15.61■□□□□ 0.09
CCT4-201ENST00000394440 SIX6OS1Q8N1H7 587 aa15.61■□□□□ 0.09
CCT4-201ENST00000394440 CRIPAKQ8N1N5 446 aa15.61■□□□□ 0.09
CCT4-201ENST00000394440 FAF2Q96CS3 445 aa15.61■□□□□ 0.09
CCT4-201ENST00000394440 EPB41L4BQ9H329 900 aa15.61■□□□□ 0.09
CCT4-201ENST00000394440 CNGB3Q9NQW8 809 aa15.61■□□□□ 0.09
CCT4-201ENST00000394440 MTRF1LQ9UGC7 380 aaKnown RBP15.61■□□□□ 0.09
CCT4-201ENST00000394440 FAN1Q9Y2M0 1017 aa15.61■□□□□ 0.09
CCT4-201ENST00000394440 KRT14P02533 472 aa15.61■□□□□ 0.09
CCT4-201ENST00000394440 ATXN1P54253 815 aaKnown RBP15.61■□□□□ 0.09
CCT4-201ENST00000394440 DYNLT1P63172 113 aa15.61■□□□□ 0.09
CCT4-201ENST00000394440 TRIP13Q15645 432 aaPredicted RBP15.61■□□□□ 0.09
CCT4-201ENST00000394440 DPYSL2Q16555 572 aa15.61■□□□□ 0.09
CCT4-201ENST00000394440 LRIG3Q6UXM1 1119 aa15.61■□□□□ 0.09
CCT4-201ENST00000394440 ANKRD33Q7Z3H0 272 aa15.61■□□□□ 0.09
CCT4-201ENST00000394440 LRRTM3Q86VH5 581 aa15.61■□□□□ 0.09
CCT4-201ENST00000394440 RFX6Q8HWS3 928 aa15.61■□□□□ 0.09
CCT4-201ENST00000394440 GLIS1Q8NBF1 620 aa15.61■□□□□ 0.09
CCT4-201ENST00000394440 APBB2Q92870 758 aa15.61■□□□□ 0.09
CCT4-201ENST00000394440 RNF157Q96PX1 679 aa15.61■□□□□ 0.09
CCT4-201ENST00000394440 TMEM209Q96SK2 561 aa15.61■□□□□ 0.09
CCT4-201ENST00000394440 NPY6RQ99463 290 aa15.61■□□□□ 0.09
CCT4-201ENST00000394440 RHOBTB2Q9BYZ6 727 aa15.61■□□□□ 0.09
CCT4-201ENST00000394440 ULBP1Q9BZM6 244 aa15.61■□□□□ 0.09
CCT4-201ENST00000394440 GPATCH2LQ9NWQ4 482 aa15.61■□□□□ 0.09
CCT4-201ENST00000394440 SAE1Q9UBE0 346 aaPredicted RBP15.61■□□□□ 0.09
CCT4-201ENST00000394440 DNAJB4Q9UDY4 337 aa15.61■□□□□ 0.09
CCT4-201ENST00000394440 ZNF148Q9UQR1 794 aa15.61■□□□□ 0.09
CCT4-201ENST00000394440 PLAAQ9Y263 795 aa15.61■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms