RNA–Protein interactions for RNA: ENST00000394342.2

APLF-202, Transcript of aprataxin and PNKP like factor, humanhuman

TSL 1 (best) BASIC

Gene APLF, Length 1,182 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APLF-202ENST00000394342 UBE2TQ9NPD8 197 aaPredicted RBP9.02□□□□□ -0.97
APLF-202ENST00000394342 SAMSN1Q9NSI8 373 aaKnown RBP9.02□□□□□ -0.97
APLF-202ENST00000394342 TMEM63CQ9P1W3 806 aa9.02□□□□□ -0.97
APLF-202ENST00000394342 HESX1Q9UBX0 185 aa9.02□□□□□ -0.97
APLF-202ENST00000394342 APEX2Q9UBZ4 518 aa9.02□□□□□ -0.97
APLF-202ENST00000394342 CHORDC1Q9UHD1 332 aaPredicted RBP9.02□□□□□ -0.97
APLF-202ENST00000394342 RAPGEFL1Q9UHV5 662 aa9.02□□□□□ -0.97
APLF-202ENST00000394342 TSPAN16Q9UKR8 245 aa9.02□□□□□ -0.97
APLF-202ENST00000394342 SIT1Q9Y3P8 196 aa9.02□□□□□ -0.97
APLF-202ENST00000394342 USP3Q9Y6I4 520 aa9.02□□□□□ -0.97
APLF-202ENST00000394342 PIAS3Q9Y6X2 628 aa9.02□□□□□ -0.97
APLF-202ENST00000394342 PTPRZ1P23471 2315 aaPredicted RBP9.02□□□□□ -0.97
APLF-202ENST00000394342 THADAQ6YHU6 1953 aa9.01□□□□□ -0.97
APLF-202ENST00000394342 RNF225M0QZC1 329 aaPredicted RBP9.01□□□□□ -0.97
APLF-202ENST00000394342 LEFTY2O00292 366 aa9.01□□□□□ -0.97
APLF-202ENST00000394342 O00370 1275 aa9.01□□□□□ -0.97
APLF-202ENST00000394342 CYP26A1O43174 497 aa9.01□□□□□ -0.97
APLF-202ENST00000394342 PI15O43692 258 aa9.01□□□□□ -0.97
APLF-202ENST00000394342 MBL2P11226 248 aaPredicted RBP9.01□□□□□ -0.97
APLF-202ENST00000394342 KRT5P13647 590 aa9.01□□□□□ -0.97
APLF-202ENST00000394342 SLC9A1P19634 815 aa9.01□□□□□ -0.97
APLF-202ENST00000394342 PON1P27169 355 aa9.01□□□□□ -0.97
APLF-202ENST00000394342 PLA2G4AP47712 749 aa9.01□□□□□ -0.97
APLF-202ENST00000394342 KPNA1P52294 538 aaPredicted RBP9.01□□□□□ -0.97
APLF-202ENST00000394342 PTPN5P54829 565 aa9.01□□□□□ -0.97
APLF-202ENST00000394342 TYRO3Q06418 890 aa9.01□□□□□ -0.97
APLF-202ENST00000394342 UBXN2BQ14CS0 331 aa9.01□□□□□ -0.97
APLF-202ENST00000394342 CNGA2Q16280 664 aa9.01□□□□□ -0.97
APLF-202ENST00000394342 PKDCCQ504Y2 493 aa9.01□□□□□ -0.97
APLF-202ENST00000394342 HSP90AA4PQ58FG1 418 aa9.01□□□□□ -0.97
APLF-202ENST00000394342 MIIPQ5JXC2 388 aa9.01□□□□□ -0.97
APLF-202ENST00000394342 CDKAL1Q5VV42 579 aa9.01□□□□□ -0.97
APLF-202ENST00000394342 C11orf57Q6ZUT1 292 aaPredicted RBP9.01□□□□□ -0.97
APLF-202ENST00000394342 TADA2BQ86TJ2 420 aa9.01□□□□□ -0.97
APLF-202ENST00000394342 PIGZQ86VD9 579 aa9.01□□□□□ -0.97
APLF-202ENST00000394342 RALGPS2Q86X27 583 aaPredicted RBP9.01□□□□□ -0.97
APLF-202ENST00000394342 CCDC105Q8IYK2 499 aa9.01□□□□□ -0.97
APLF-202ENST00000394342 ARHGAP18Q8N392 663 aa9.01□□□□□ -0.97
APLF-202ENST00000394342 ZNF276Q8N554 614 aa9.01□□□□□ -0.97
APLF-202ENST00000394342 RIN3Q8TB24 985 aa9.01□□□□□ -0.97
APLF-202ENST00000394342 OSCP1Q8WVF1 389 aa9.01□□□□□ -0.97
APLF-202ENST00000394342 ATP2A3Q93084 1043 aa9.01□□□□□ -0.97
APLF-202ENST00000394342 ZFYVE19Q96K21 471 aa9.01□□□□□ -0.97
APLF-202ENST00000394342 FOXQ1Q9C009 403 aa9.01□□□□□ -0.97
APLF-202ENST00000394342 IRF2BPLQ9H1B7 796 aa9.01□□□□□ -0.97
APLF-202ENST00000394342 CYLDQ9NQC7 956 aa9.01□□□□□ -0.97
APLF-202ENST00000394342 HPS4Q9NQG7 708 aa9.01□□□□□ -0.97
APLF-202ENST00000394342 GKN1Q9NS71 199 aa9.01□□□□□ -0.97
APLF-202ENST00000394342 DUS2Q9NX74 493 aaKnown RBP9.01□□□□□ -0.97
APLF-202ENST00000394342 WDR3Q9UNX4 943 aaKnown RBP eCLIP9.01□□□□□ -0.97
APLF-202ENST00000394342 CPQQ9Y646 472 aa9.01□□□□□ -0.97
APLF-202ENST00000394342 CKAP5Q14008 2032 aa9□□□□□ -0.97
APLF-202ENST00000394342 NYNRINQ9P2P1 1898 aaKnown RBP9□□□□□ -0.97
APLF-202ENST00000394342 CFAP54Q96N23 3096 aa9□□□□□ -0.97
APLF-202ENST00000394342 SHISA7A6NL88 538 aa9□□□□□ -0.97
APLF-202ENST00000394342 FAM170BA6NMN3 283 aa9□□□□□ -0.97
APLF-202ENST00000394342 SPECC1L-ADORA2AF8WAN1 911 aa9□□□□□ -0.97
APLF-202ENST00000394342 SLC9A3R1O14745 358 aaPredicted RBP9□□□□□ -0.97
APLF-202ENST00000394342 NCAM2O15394 837 aa9□□□□□ -0.97
APLF-202ENST00000394342 COCHO43405 550 aa9□□□□□ -0.97
APLF-202ENST00000394342 TLR5O60602 858 aa9□□□□□ -0.97
APLF-202ENST00000394342 TPM2P07951 284 aa9□□□□□ -0.97
APLF-202ENST00000394342 BRD2P25440 801 aaKnown RBP9□□□□□ -0.97
APLF-202ENST00000394342 TARSP26639 723 aaKnown RBP9□□□□□ -0.97
APLF-202ENST00000394342 CTHP32929 405 aa9□□□□□ -0.97
APLF-202ENST00000394342 MLLT3P42568 568 aaPredicted RBP9□□□□□ -0.97
APLF-202ENST00000394342 IFNAR2P48551 515 aa9□□□□□ -0.97
APLF-202ENST00000394342 AMPD2Q01433 879 aa9□□□□□ -0.97
APLF-202ENST00000394342 MYL5Q02045 173 aa9□□□□□ -0.97
APLF-202ENST00000394342 TNK2Q07912 1038 aa9□□□□□ -0.97
APLF-202ENST00000394342 PDE4CQ08493 712 aa9□□□□□ -0.97
APLF-202ENST00000394342 RUNX3Q13761 415 aa9□□□□□ -0.97
APLF-202ENST00000394342 MEA1Q16626 185 aa9□□□□□ -0.97
APLF-202ENST00000394342 KLHL40Q2TBA0 621 aa9□□□□□ -0.97
APLF-202ENST00000394342 EML3Q32P44 896 aa9□□□□□ -0.97
APLF-202ENST00000394342 PM20D1Q6GTS8 502 aa9□□□□□ -0.97
APLF-202ENST00000394342 CAVIN1Q6NZI2 390 aaKnown RBP9□□□□□ -0.97
APLF-202ENST00000394342 KLHDC10Q6PID8 442 aa9□□□□□ -0.97
APLF-202ENST00000394342 ZNF687Q8N1G0 1237 aa9□□□□□ -0.97
APLF-202ENST00000394342 CPA6Q8N4T0 437 aa9□□□□□ -0.97
APLF-202ENST00000394342 DTWD2Q8NBA8 298 aa9□□□□□ -0.97
APLF-202ENST00000394342 ANKRD20A12PQ8NF67 263 aa9□□□□□ -0.97
APLF-202ENST00000394342 PRSS33Q8NF86 280 aa9□□□□□ -0.97
APLF-202ENST00000394342 KCTD13Q8WZ19 329 aa9□□□□□ -0.97
APLF-202ENST00000394342 TFAP2BQ92481 460 aa9□□□□□ -0.97
APLF-202ENST00000394342 FAM3CQ92520 227 aa9□□□□□ -0.97
APLF-202ENST00000394342 SHC3Q92529 594 aa9□□□□□ -0.97
APLF-202ENST00000394342 CLDN23Q96B33 292 aa9□□□□□ -0.97
APLF-202ENST00000394342 ZFRQ96KR1 1074 aaKnown RBP9□□□□□ -0.97
APLF-202ENST00000394342 CDK5RAP1Q96SZ6 601 aaKnown RBP9□□□□□ -0.97
APLF-202ENST00000394342 BPIFA3Q9BQP9 254 aa9□□□□□ -0.97
APLF-202ENST00000394342 IER2Q9BTL4 223 aa9□□□□□ -0.97
APLF-202ENST00000394342 NACA2Q9H009 215 aa9□□□□□ -0.97
APLF-202ENST00000394342 NAT10Q9H0A0 1025 aaKnown RBP9□□□□□ -0.97
APLF-202ENST00000394342 EBF3Q9H4W6 596 aa9□□□□□ -0.97
APLF-202ENST00000394342 CCSER2Q9H7U1 834 aa9□□□□□ -0.97
APLF-202ENST00000394342 SIX2Q9NPC8 291 aa9□□□□□ -0.97
APLF-202ENST00000394342 MTPAPQ9NVV4 582 aaKnown RBP eCLIP9□□□□□ -0.97
APLF-202ENST00000394342 GTSE1Q9NYZ3 720 aa9□□□□□ -0.97
APLF-202ENST00000394342 CLIC5Q9NZA1 410 aa9□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms