RNA–Protein interactions for RNA: ENST00000393820.2

NPM1-203, Transcript of nucleophosmin 1, humanhuman

TSL 1 (best) BASIC

Gene NPM1, Length 1,598 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPM1-203ENST00000393820 TECP42680 631 aa5.97□□□□□ -1.45
NPM1-203ENST00000393820 HTR3AP46098 478 aa5.97□□□□□ -1.45
NPM1-203ENST00000393820 NPEPPSP55786 919 aa5.97□□□□□ -1.45
NPM1-203ENST00000393820 EIF3BP55884 814 aaKnown RBP5.97□□□□□ -1.45
NPM1-203ENST00000393820 SCAND1P57086 179 aa5.97□□□□□ -1.45
NPM1-203ENST00000393820 SMAD3P84022 425 aaKnown RBP5.97□□□□□ -1.45
NPM1-203ENST00000393820 GFPT1Q06210 699 aaPredicted RBP5.97□□□□□ -1.45
NPM1-203ENST00000393820 RPS6KA1Q15418 735 aa5.97□□□□□ -1.45
NPM1-203ENST00000393820 SMAD2Q15796 467 aaKnown RBP5.97□□□□□ -1.45
NPM1-203ENST00000393820 CLUL1Q15846 466 aa5.97□□□□□ -1.45
NPM1-203ENST00000393820 TMEM266Q2M3C6 531 aa5.97□□□□□ -1.45
NPM1-203ENST00000393820 FAM153CQ494X1 144 aa5.97□□□□□ -1.45
NPM1-203ENST00000393820 CCDC40Q4G0X9 1142 aa5.97□□□□□ -1.45
NPM1-203ENST00000393820 WLSQ5T9L3 541 aa5.97□□□□□ -1.45
NPM1-203ENST00000393820 KCTD16Q68DU8 428 aa5.97□□□□□ -1.45
NPM1-203ENST00000393820 FSTL4Q6MZW2 842 aa5.97□□□□□ -1.45
NPM1-203ENST00000393820 B3GNT9Q6UX72 402 aa5.97□□□□□ -1.45
NPM1-203ENST00000393820 CCDC121Q6ZUS5 278 aa5.97□□□□□ -1.45
NPM1-203ENST00000393820 HEATR3Q7Z4Q2 680 aa5.97□□□□□ -1.45
NPM1-203ENST00000393820 MAATS1Q7Z4T9 603 aa5.97□□□□□ -1.45
NPM1-203ENST00000393820 CROCCP2Q86T23 111 aa5.97□□□□□ -1.45
NPM1-203ENST00000393820 RASSF3Q86WH2 238 aa5.97□□□□□ -1.45
NPM1-203ENST00000393820 MYOCDQ8IZQ8 938 aa5.97□□□□□ -1.45
NPM1-203ENST00000393820 ZNF444Q8N0Y2 327 aaPredicted RBP5.97□□□□□ -1.45
NPM1-203ENST00000393820 CCDC26Q8TAB7 109 aa5.97□□□□□ -1.45
NPM1-203ENST00000393820 RAET1EQ8TD07 263 aa5.97□□□□□ -1.45
NPM1-203ENST00000393820 ZNF384Q8TF68 577 aa5.97□□□□□ -1.45
NPM1-203ENST00000393820 CASKIN2Q8WXE0 1202 aa5.97□□□□□ -1.45
NPM1-203ENST00000393820 LARP4BQ92615 738 aaKnown RBP5.97□□□□□ -1.45
NPM1-203ENST00000393820 ZKSCAN4Q969J2 545 aaPredicted RBP5.97□□□□□ -1.45
NPM1-203ENST00000393820 E2F7Q96AV8 911 aa5.97□□□□□ -1.45
NPM1-203ENST00000393820 CDK5RAP3Q96JB5 506 aa5.97□□□□□ -1.45
NPM1-203ENST00000393820 KRT12Q99456 494 aa5.97□□□□□ -1.45
NPM1-203ENST00000393820 PLIN2Q99541 437 aa5.97□□□□□ -1.45
NPM1-203ENST00000393820 IDI2Q9BXS1 227 aa5.97□□□□□ -1.45
NPM1-203ENST00000393820 DUSP15Q9H1R2 295 aaPredicted RBP5.97□□□□□ -1.45
NPM1-203ENST00000393820 MS4A5Q9H3V2 200 aa5.97□□□□□ -1.45
NPM1-203ENST00000393820 SLITRK6Q9H5Y7 841 aa5.97□□□□□ -1.45
NPM1-203ENST00000393820 CNOT10Q9H9A5 744 aaKnown RBP5.97□□□□□ -1.45
NPM1-203ENST00000393820 BLOC1S4Q9NUP1 217 aa5.97□□□□□ -1.45
NPM1-203ENST00000393820 FAM153AQ9UHL3 310 aa5.97□□□□□ -1.45
NPM1-203ENST00000393820 INTUQ9ULD6 942 aa5.97□□□□□ -1.45
NPM1-203ENST00000393820 NFS1Q9Y697 457 aa5.97□□□□□ -1.45
NPM1-203ENST00000393820 OTOFQ9HC10 1997 aa5.96□□□□□ -1.45
NPM1-203ENST00000393820 A0A0C4DFX4 3053 aa5.96□□□□□ -1.46
NPM1-203ENST00000393820 SZT2Q5T011 3432 aa5.96□□□□□ -1.46
NPM1-203ENST00000393820 ROBO3Q96MS0 1386 aa5.96□□□□□ -1.46
NPM1-203ENST00000393820 ADGRA2Q96PE1 1338 aa5.96□□□□□ -1.46
NPM1-203ENST00000393820 A0A0A6YYK5 440 aaPredicted RBP5.96□□□□□ -1.46
NPM1-203ENST00000393820 MYMKA6NI61 221 aa5.96□□□□□ -1.46
NPM1-203ENST00000393820 KLRF2D3W0D1 207 aa5.96□□□□□ -1.46
NPM1-203ENST00000393820 E7EVH7 732 aa5.96□□□□□ -1.46
NPM1-203ENST00000393820 H3BS24 57 aa5.96□□□□□ -1.46
NPM1-203ENST00000393820 PDHXO00330 501 aa5.96□□□□□ -1.46
NPM1-203ENST00000393820 XPOTO43592 962 aaKnown RBP5.96□□□□□ -1.46
NPM1-203ENST00000393820 NCK2O43639 380 aa5.96□□□□□ -1.46
NPM1-203ENST00000393820 BUB1O43683 1085 aa5.96□□□□□ -1.46
NPM1-203ENST00000393820 CYTH3O43739 400 aa5.96□□□□□ -1.46
NPM1-203ENST00000393820 CTNND1O60716 968 aaKnown RBP5.96□□□□□ -1.46
NPM1-203ENST00000393820 GFPT2O94808 682 aa5.96□□□□□ -1.46
NPM1-203ENST00000393820 NOL4O94818 638 aa5.96□□□□□ -1.46
NPM1-203ENST00000393820 IL33O95760 270 aa5.96□□□□□ -1.46
NPM1-203ENST00000393820 FOSP01100 380 aaPredicted RBP5.96□□□□□ -1.46
NPM1-203ENST00000393820 GSTM1P09488 218 aa5.96□□□□□ -1.46
NPM1-203ENST00000393820 JUNBP17275 347 aaPredicted RBP5.96□□□□□ -1.46
NPM1-203ENST00000393820 VCAM1P19320 739 aa5.96□□□□□ -1.46
NPM1-203ENST00000393820 KLRC1P26715 233 aa5.96□□□□□ -1.46
NPM1-203ENST00000393820 SLC8A1P32418 973 aa5.96□□□□□ -1.46
NPM1-203ENST00000393820 SLC1A4P43007 532 aa5.96□□□□□ -1.46
NPM1-203ENST00000393820 PSMC4P43686 418 aa5.96□□□□□ -1.46
NPM1-203ENST00000393820 GPR3P46089 330 aa5.96□□□□□ -1.46
NPM1-203ENST00000393820 NAPAP54920 295 aa5.96□□□□□ -1.46
NPM1-203ENST00000393820 GSTO1P78417 241 aa5.96□□□□□ -1.46
NPM1-203ENST00000393820 NEDD9Q14511 834 aa5.96□□□□□ -1.46
NPM1-203ENST00000393820 CRY1Q16526 586 aa5.96□□□□□ -1.46
NPM1-203ENST00000393820 CPSF6Q16630 551 aaKnown RBP eCLIP5.96□□□□□ -1.467e-7■□□□□ 8.7
NPM1-203ENST00000393820 KIAA0753Q2KHM9 967 aa5.96□□□□□ -1.46
NPM1-203ENST00000393820 LETM2Q2VYF4 491 aa5.96□□□□□ -1.46
NPM1-203ENST00000393820 PREPLQ4J6C6 727 aaPredicted RBP5.96□□□□□ -1.46
NPM1-203ENST00000393820 ZCWPW2Q504Y3 356 aa5.96□□□□□ -1.46
NPM1-203ENST00000393820 TDRD12Q587J7 1177 aaKnown RBP5.96□□□□□ -1.46
NPM1-203ENST00000393820 CEP85LQ5SZL2 805 aa5.96□□□□□ -1.46
NPM1-203ENST00000393820 GPR158Q5T848 1215 aa5.96□□□□□ -1.46
NPM1-203ENST00000393820 KRT79Q5XKE5 535 aa5.96□□□□□ -1.46
NPM1-203ENST00000393820 TTC19Q6DKK2 380 aaPredicted RBP5.96□□□□□ -1.46
NPM1-203ENST00000393820 ZNF574Q6ZN55 896 aaPredicted RBP5.96□□□□□ -1.46
NPM1-203ENST00000393820 ZC3H3Q8IXZ2 948 aaKnown RBP5.96□□□□□ -1.46
NPM1-203ENST00000393820 CCDC13Q8IYE1 715 aa5.96□□□□□ -1.46
NPM1-203ENST00000393820 SYCE1Q8N0S2 351 aa5.96□□□□□ -1.46
NPM1-203ENST00000393820 SH2D3CQ8N5H7 860 aa5.96□□□□□ -1.46
NPM1-203ENST00000393820 SEC14L1Q92503 715 aa5.96□□□□□ -1.46
NPM1-203ENST00000393820 TBC1D5Q92609 795 aa5.96□□□□□ -1.46
NPM1-203ENST00000393820 RAD54LQ92698 747 aa5.96□□□□□ -1.46
NPM1-203ENST00000393820 MS4A14Q96JA4 679 aa5.96□□□□□ -1.46
NPM1-203ENST00000393820 TEKT5Q96M29 485 aa5.96□□□□□ -1.46
NPM1-203ENST00000393820 NAP1L4Q99733 375 aaKnown RBP5.96□□□□□ -1.46
NPM1-203ENST00000393820 MKNK2Q9HBH9 465 aa5.96□□□□□ -1.46
NPM1-203ENST00000393820 FAM114A2Q9NRY5 505 aa5.96□□□□□ -1.46
NPM1-203ENST00000393820 CATSPERZQ9NTU4 200 aa5.96□□□□□ -1.46
NPM1-203ENST00000393820 CCM2LQ9NUG4 571 aaPredicted RBP5.96□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms