RNA–Protein interactions for RNA: ENST00000393577.7

HMGA2-202, Transcript of high mobility group AT-hook 2, humanhuman

TSL 3 BASIC

Gene HMGA2, Length 611 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA2-202ENST00000393577 GRSF1Q12849 480 aaKnown RBP eCLIP24.39■■□□□ 1.49
HMGA2-202ENST00000393577 NR1H3Q13133 447 aa24.39■■□□□ 1.49
HMGA2-202ENST00000393577 ZNF528Q3MIS6 628 aa24.39■■□□□ 1.49
HMGA2-202ENST00000393577 TMEM196Q5HYL7 178 aa24.39■■□□□ 1.49
HMGA2-202ENST00000393577 CCDC186Q7Z3E2 898 aa24.39■■□□□ 1.49
HMGA2-202ENST00000393577 IRF2BP1Q8IU81 584 aa24.39■■□□□ 1.49
HMGA2-202ENST00000393577 KIAA1958Q8N8K9 716 aa24.39■■□□□ 1.49
HMGA2-202ENST00000393577 CYLDQ9NQC7 956 aa24.39■■□□□ 1.49
HMGA2-202ENST00000393577 HESX1Q9UBX0 185 aa24.39■■□□□ 1.49
HMGA2-202ENST00000393577 USP3Q9Y6I4 520 aa24.39■■□□□ 1.49
HMGA2-202ENST00000393577 E2F8A0AVK6 867 aa24.38■■□□□ 1.49
HMGA2-202ENST00000393577 SLC9A3R1O14745 358 aaPredicted RBP24.38■■□□□ 1.49
HMGA2-202ENST00000393577 GFRA3O60609 400 aa24.38■■□□□ 1.49
HMGA2-202ENST00000393577 TBX18O95935 607 aa24.38■■□□□ 1.49
HMGA2-202ENST00000393577 GALK1P51570 392 aa24.38■■□□□ 1.49
HMGA2-202ENST00000393577 CCR3P51677 355 aa24.38■■□□□ 1.49
HMGA2-202ENST00000393577 BCAT1P54687 386 aa24.38■■□□□ 1.49
HMGA2-202ENST00000393577 GCNT1Q02742 428 aa24.38■■□□□ 1.49
HMGA2-202ENST00000393577 PDE4CQ08493 712 aa24.38■■□□□ 1.49
HMGA2-202ENST00000393577 ZC3H14Q6PJT7 736 aaKnown RBP24.38■■□□□ 1.49
HMGA2-202ENST00000393577 GPT2Q8TD30 523 aa24.38■■□□□ 1.49
HMGA2-202ENST00000393577 NKD2Q969F2 451 aaPredicted RBP24.38■■□□□ 1.49
HMGA2-202ENST00000393577 P2RY13Q9BPV8 354 aa24.38■■□□□ 1.49
HMGA2-202ENST00000393577 UBXN6Q9BZV1 441 aa24.38■■□□□ 1.49
HMGA2-202ENST00000393577 DACH1Q9UI36 760 aa24.38■■□□□ 1.49
HMGA2-202ENST00000393577 NAGPAQ9UK23 515 aa24.38■■□□□ 1.49
HMGA2-202ENST00000393577 SH3BP1Q9Y3L3 701 aa24.38■■□□□ 1.49
HMGA2-202ENST00000393577 ATG2BQ96BY7 2078 aa24.38■■□□□ 1.49
HMGA2-202ENST00000393577 RNF225M0QZC1 329 aaPredicted RBP24.37■■□□□ 1.49
HMGA2-202ENST00000393577 TULP2O00295 520 aa24.37■■□□□ 1.49
HMGA2-202ENST00000393577 O00370 1275 aa24.37■■□□□ 1.49
HMGA2-202ENST00000393577 CYP17A1P05093 508 aa24.37■■□□□ 1.49
HMGA2-202ENST00000393577 PAEPP09466 180 aa24.37■■□□□ 1.49
HMGA2-202ENST00000393577 RARGP13631 454 aa24.37■■□□□ 1.49
HMGA2-202ENST00000393577 MTIF2P46199 727 aaKnown RBP24.37■■□□□ 1.49
HMGA2-202ENST00000393577 SATB1Q01826 763 aa24.37■■□□□ 1.49
HMGA2-202ENST00000393577 BST2Q10589 180 aaKnown RBP24.37■■□□□ 1.49
HMGA2-202ENST00000393577 RAB41Q5JT25 222 aa24.37■■□□□ 1.49
HMGA2-202ENST00000393577 MAMSTRQ6ZN01 415 aa24.37■■□□□ 1.49
HMGA2-202ENST00000393577 ASCL5Q7RTU5 278 aa24.37■■□□□ 1.49
HMGA2-202ENST00000393577 SCD5Q86SK9 330 aa24.37■■□□□ 1.49
HMGA2-202ENST00000393577 SYNPOQ8N3V7 929 aa24.37■■□□□ 1.49
HMGA2-202ENST00000393577 SPEM1Q8N4L4 309 aa24.37■■□□□ 1.49
HMGA2-202ENST00000393577 RBBP8NLQ8NC74 664 aaPredicted RBP24.37■■□□□ 1.49
HMGA2-202ENST00000393577 UBA3Q8TBC4 463 aa24.37■■□□□ 1.49
HMGA2-202ENST00000393577 TFAP2BQ92481 460 aa24.37■■□□□ 1.49
HMGA2-202ENST00000393577 CD101Q93033 1021 aa24.37■■□□□ 1.49
HMGA2-202ENST00000393577 KREMEN1Q96MU8 473 aa24.37■■□□□ 1.49
HMGA2-202ENST00000393577 CRACR2AQ9BSW2 395 aa24.37■■□□□ 1.49
HMGA2-202ENST00000393577 FBRSL1Q9HCM7 1045 aaKnown RBP24.37■■□□□ 1.49
HMGA2-202ENST00000393577 MTPAPQ9NVV4 582 aaKnown RBP eCLIP24.37■■□□□ 1.49
HMGA2-202ENST00000393577 NUDT5Q9UKK9 219 aa24.37■■□□□ 1.49
HMGA2-202ENST00000393577 KIAA1257Q9ULG3 409 aa24.37■■□□□ 1.49
HMGA2-202ENST00000393577 MYOFQ9NZM1 2061 aa24.37■■□□□ 1.49
HMGA2-202ENST00000393577 USP34Q70CQ2 3546 aa24.36■■□□□ 1.49
HMGA2-202ENST00000393577 PRR23AA6NEV1 266 aa24.36■■□□□ 1.49
HMGA2-202ENST00000393577 GOLGA6L22H0YM25 854 aa24.36■■□□□ 1.49
HMGA2-202ENST00000393577 XPO1O14980 1071 aaKnown RBP24.36■■□□□ 1.49
HMGA2-202ENST00000393577 MDM4O15151 490 aa24.36■■□□□ 1.49
HMGA2-202ENST00000393577 EGFP01133 1207 aa24.36■■□□□ 1.49
HMGA2-202ENST00000393577 ATP5C1P36542 298 aaKnown RBP24.36■■□□□ 1.49
HMGA2-202ENST00000393577 ADGRG2Q8IZP9 1017 aa24.36■■□□□ 1.49
HMGA2-202ENST00000393577 WBP2Q969T9 261 aa24.36■■□□□ 1.49
HMGA2-202ENST00000393577 EXOC4Q96A65 974 aa24.36■■□□□ 1.49
HMGA2-202ENST00000393577 THAP9Q9H5L6 903 aa24.36■■□□□ 1.49
HMGA2-202ENST00000393577 TBC1D14Q9P2M4 693 aa24.36■■□□□ 1.49
HMGA2-202ENST00000393577 DMDP11532 3685 aa24.36■■□□□ 1.49
HMGA2-202ENST00000393577 CALCAP01258 141 aa24.35■■□□□ 1.49
HMGA2-202ENST00000393577 DRD1P21728 446 aa24.35■■□□□ 1.49
HMGA2-202ENST00000393577 BRD2P25440 801 aaKnown RBP24.35■■□□□ 1.49
HMGA2-202ENST00000393577 ERCC5P28715 1186 aaPredicted RBP24.35■■□□□ 1.49
HMGA2-202ENST00000393577 CXCL12P48061 93 aa24.35■■□□□ 1.49
HMGA2-202ENST00000393577 PSEN1P49768 467 aa24.35■■□□□ 1.49
HMGA2-202ENST00000393577 TKTL1P51854 596 aa24.35■■□□□ 1.49
HMGA2-202ENST00000393577 PPP2R5DQ14738 602 aa24.35■■□□□ 1.49
HMGA2-202ENST00000393577 DHCR24Q15392 516 aa24.35■■□□□ 1.49
HMGA2-202ENST00000393577 C10orf120Q5SQS8 335 aa24.35■■□□□ 1.49
HMGA2-202ENST00000393577 KLF16Q9BXK1 252 aaPredicted RBP24.35■■□□□ 1.49
HMGA2-202ENST00000393577 UBE2TQ9NPD8 197 aaPredicted RBP24.35■■□□□ 1.49
HMGA2-202ENST00000393577 ZFHX2Q9C0A1 2572 aaPredicted RBP24.34■■□□□ 1.49
HMGA2-202ENST00000393577 RALAP11233 206 aa24.34■■□□□ 1.49
HMGA2-202ENST00000393577 GAB4Q2WGN9 574 aa24.34■■□□□ 1.49
HMGA2-202ENST00000393577 KLHDC10Q6PID8 442 aa24.34■■□□□ 1.49
HMGA2-202ENST00000393577 TRIM65Q6PJ69 517 aa24.34■■□□□ 1.49
HMGA2-202ENST00000393577 LCLAT1Q6UWP7 414 aa24.34■■□□□ 1.49
HMGA2-202ENST00000393577 FAM114A1Q8IWE2 563 aa24.34■■□□□ 1.49
HMGA2-202ENST00000393577 BBS7Q8IWZ6 715 aa24.34■■□□□ 1.49
HMGA2-202ENST00000393577 ZSWIM1Q9BR11 485 aa24.34■■□□□ 1.49
HMGA2-202ENST00000393577 ULBP1Q9BZM6 244 aa24.34■■□□□ 1.49
HMGA2-202ENST00000393577 LRRC4Q9HBW1 653 aa24.34■■□□□ 1.49
HMGA2-202ENST00000393577 C2orf42Q9NWW7 574 aa24.34■■□□□ 1.49
HMGA2-202ENST00000393577 ZSCAN32Q9NX65 697 aa24.34■■□□□ 1.49
HMGA2-202ENST00000393577 DNMT3LQ9UJW3 386 aa24.34■■□□□ 1.49
HMGA2-202ENST00000393577 WDR3Q9UNX4 943 aaKnown RBP eCLIP24.34■■□□□ 1.49
HMGA2-202ENST00000393577 ADH1CP00326 375 aa24.33■■□□□ 1.49
HMGA2-202ENST00000393577 SETSIPP0DME0 302 aa24.33■■□□□ 1.49
HMGA2-202ENST00000393577 TDGF1P13385 188 aa24.33■■□□□ 1.49
HMGA2-202ENST00000393577 KRT5P13647 590 aa24.33■■□□□ 1.49
HMGA2-202ENST00000393577 OPRD1P41143 372 aa24.33■■□□□ 1.49
HMGA2-202ENST00000393577 PLA2G4AP47712 749 aa24.33■■□□□ 1.49
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms