RNA–Protein interactions for RNA: ENST00000393546.8

PDLIM7-204, Transcript of PDZ and LIM domain 7, humanhuman

TSL 3

Gene PDLIM7, Length 671 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-204ENST00000393546 SPAG5Q96R06 1193 aa19.98■□□□□ 0.79
PDLIM7-204ENST00000393546 ULBP1Q9BZM6 244 aa19.98■□□□□ 0.79
PDLIM7-204ENST00000393546 NACA2Q9H009 215 aa19.98■□□□□ 0.79
PDLIM7-204ENST00000393546 CCSER2Q9H7U1 834 aa19.98■□□□□ 0.79
PDLIM7-204ENST00000393546 NMUR1Q9HB89 426 aa19.98■□□□□ 0.79
PDLIM7-204ENST00000393546 NLRC4Q9NPP4 1024 aa19.98■□□□□ 0.79
PDLIM7-204ENST00000393546 C11orf16Q9NQ32 467 aa19.98■□□□□ 0.79
PDLIM7-204ENST00000393546 TRPV5Q9NQA5 729 aa19.98■□□□□ 0.79
PDLIM7-204ENST00000393546 CPQQ9Y646 472 aa19.98■□□□□ 0.79
PDLIM7-204ENST00000393546 A0A1B0GTH6 734 aa19.97■□□□□ 0.79
PDLIM7-204ENST00000393546 PRR33A8MZF0 331 aa19.97■□□□□ 0.79
PDLIM7-204ENST00000393546 F8VZ95 297 aa19.97■□□□□ 0.79
PDLIM7-204ENST00000393546 TLR5O60602 858 aa19.97■□□□□ 0.79
PDLIM7-204ENST00000393546 RALAP11233 206 aa19.97■□□□□ 0.79
PDLIM7-204ENST00000393546 RARGP13631 454 aa19.97■□□□□ 0.79
PDLIM7-204ENST00000393546 TCF3P15923 654 aa19.97■□□□□ 0.79
PDLIM7-204ENST00000393546 ATP5C1P36542 298 aaKnown RBP19.97■□□□□ 0.79
PDLIM7-204ENST00000393546 FANCCQ00597 558 aa19.97■□□□□ 0.79
PDLIM7-204ENST00000393546 SCD5Q86SK9 330 aa19.97■□□□□ 0.79
PDLIM7-204ENST00000393546 TADA2BQ86TJ2 420 aa19.97■□□□□ 0.79
PDLIM7-204ENST00000393546 SIX5Q8N196 739 aa19.97■□□□□ 0.79
PDLIM7-204ENST00000393546 CSGALNACT1Q8TDX6 532 aa19.97■□□□□ 0.79
PDLIM7-204ENST00000393546 STK32AQ8WU08 396 aa19.97■□□□□ 0.79
PDLIM7-204ENST00000393546 NAP1L5Q96NT1 182 aaPredicted RBP19.97■□□□□ 0.79
PDLIM7-204ENST00000393546 MFSD1Q9H3U5 465 aa19.97■□□□□ 0.79
PDLIM7-204ENST00000393546 CYLDQ9NQC7 956 aa19.97■□□□□ 0.79
PDLIM7-204ENST00000393546 CNGB3Q9NQW8 809 aa19.97■□□□□ 0.79
PDLIM7-204ENST00000393546 GKN1Q9NS71 199 aa19.97■□□□□ 0.79
PDLIM7-204ENST00000393546 CLIC5Q9NZA1 410 aa19.97■□□□□ 0.79
PDLIM7-204ENST00000393546 PCDHGC3Q9UN70 934 aa19.97■□□□□ 0.79
PDLIM7-204ENST00000393546 TRIOO75962 3097 aa19.97■□□□□ 0.79
PDLIM7-204ENST00000393546 MYO16Q9Y6X6 1858 aa19.96■□□□□ 0.79
PDLIM7-204ENST00000393546 LEFTY2O00292 366 aa19.96■□□□□ 0.79
PDLIM7-204ENST00000393546 EPHB6O15197 1021 aa19.96■□□□□ 0.79
PDLIM7-204ENST00000393546 STAT1P42224 750 aa19.96■□□□□ 0.79
PDLIM7-204ENST00000393546 ACADSBP45954 432 aa19.96■□□□□ 0.79
PDLIM7-204ENST00000393546 MTF1Q14872 753 aa19.96■□□□□ 0.79
PDLIM7-204ENST00000393546 NR1I3Q14994 352 aa19.96■□□□□ 0.79
PDLIM7-204ENST00000393546 ZNF77Q15935 545 aa19.96■□□□□ 0.79
PDLIM7-204ENST00000393546 DDX42Q86XP3 938 aaKnown RBP eCLIP19.96■□□□□ 0.79
PDLIM7-204ENST00000393546 SCML4Q8N228 414 aa19.96■□□□□ 0.79
PDLIM7-204ENST00000393546 ZNF276Q8N554 614 aa19.96■□□□□ 0.79
PDLIM7-204ENST00000393546 SHDQ96IW2 340 aa19.96■□□□□ 0.79
PDLIM7-204ENST00000393546 CDK5RAP1Q96SZ6 601 aaKnown RBP19.96■□□□□ 0.79
PDLIM7-204ENST00000393546 PDCL3Q9H2J4 239 aa19.96■□□□□ 0.79
PDLIM7-204ENST00000393546 ARHGEF3Q9NR81 526 aa19.96■□□□□ 0.79
PDLIM7-204ENST00000393546 ST7Q9NRC1 585 aa19.96■□□□□ 0.79
PDLIM7-204ENST00000393546 MTPAPQ9NVV4 582 aaKnown RBP eCLIP19.96■□□□□ 0.79
PDLIM7-204ENST00000393546 OSER1Q9NX31 292 aa19.96■□□□□ 0.79
PDLIM7-204ENST00000393546 SMPD4Q9NXE4 827 aa19.96■□□□□ 0.79
PDLIM7-204ENST00000393546 KRBA1A5PL33 1030 aa19.95■□□□□ 0.78
PDLIM7-204ENST00000393546 STK25O00506 426 aa19.95■□□□□ 0.78
PDLIM7-204ENST00000393546 FBXO21O94952 628 aa19.95■□□□□ 0.78
PDLIM7-204ENST00000393546 TBX18O95935 607 aa19.95■□□□□ 0.78
PDLIM7-204ENST00000393546 CYP11B1P15538 503 aa19.95■□□□□ 0.78
PDLIM7-204ENST00000393546 SOX5P35711 763 aa19.95■□□□□ 0.78
PDLIM7-204ENST00000393546 UBASH3AP57075 661 aa19.95■□□□□ 0.78
PDLIM7-204ENST00000393546 JAM2P57087 298 aa19.95■□□□□ 0.78
PDLIM7-204ENST00000393546 YWHAGP61981 247 aaKnown RBP eCLIP19.95■□□□□ 0.78
PDLIM7-204ENST00000393546 PRKCQQ04759 706 aa19.95■□□□□ 0.78
PDLIM7-204ENST00000393546 USP4Q13107 963 aa19.95■□□□□ 0.78
PDLIM7-204ENST00000393546 MLF2Q15773 248 aaPredicted RBP19.95■□□□□ 0.78
PDLIM7-204ENST00000393546 CACNA2D4Q7Z3S7 1137 aa19.95■□□□□ 0.78
PDLIM7-204ENST00000393546 NDRG1Q92597 394 aaKnown RBP19.95■□□□□ 0.78
PDLIM7-204ENST00000393546 ZFYVE19Q96K21 471 aa19.95■□□□□ 0.78
PDLIM7-204ENST00000393546 LRFN3Q9BTN0 628 aa19.95■□□□□ 0.78
PDLIM7-204ENST00000393546 LHX5Q9H2C1 402 aa19.95■□□□□ 0.78
PDLIM7-204ENST00000393546 CEP83Q9Y592 693 aa19.95■□□□□ 0.78
PDLIM7-204ENST00000393546 A0A1W2PQC6 194 aa19.94■□□□□ 0.78
PDLIM7-204ENST00000393546 PIK3R2O00459 728 aa19.94■□□□□ 0.78
PDLIM7-204ENST00000393546 GABBR2O75899 941 aa19.94■□□□□ 0.78
PDLIM7-204ENST00000393546 GFPT2O94808 682 aa19.94■□□□□ 0.78
PDLIM7-204ENST00000393546 RPL34P49207 117 aaKnown RBP19.94■□□□□ 0.78
PDLIM7-204ENST00000393546 DAOAP59103 153 aa19.94■□□□□ 0.78
PDLIM7-204ENST00000393546 ZXDBP98169 803 aa19.94■□□□□ 0.78
PDLIM7-204ENST00000393546 PDGFRLQ15198 375 aa19.94■□□□□ 0.78
PDLIM7-204ENST00000393546 C10orf120Q5SQS8 335 aa19.94■□□□□ 0.78
PDLIM7-204ENST00000393546 BTBD8Q5XKL5 378 aa19.94■□□□□ 0.78
PDLIM7-204ENST00000393546 KLHDC10Q6PID8 442 aa19.94■□□□□ 0.78
PDLIM7-204ENST00000393546 HFE2Q6ZVN8 426 aa19.94■□□□□ 0.78
PDLIM7-204ENST00000393546 KIAA1958Q8N8K9 716 aa19.94■□□□□ 0.78
PDLIM7-204ENST00000393546 RIN3Q8TB24 985 aa19.94■□□□□ 0.78
PDLIM7-204ENST00000393546 IRGQQ8WZA9 623 aa19.94■□□□□ 0.78
PDLIM7-204ENST00000393546 NOX5Q96PH1 765 aa19.94■□□□□ 0.78
PDLIM7-204ENST00000393546 FAM83CQ9BQN1 747 aa19.94■□□□□ 0.78
PDLIM7-204ENST00000393546 SLC4A5Q9BY07 1137 aa19.94■□□□□ 0.78
PDLIM7-204ENST00000393546 HEBP1Q9NRV9 189 aa19.94■□□□□ 0.78
PDLIM7-204ENST00000393546 DUS2Q9NX74 493 aaKnown RBP19.94■□□□□ 0.78
PDLIM7-204ENST00000393546 DNMT3LQ9UJW3 386 aa19.94■□□□□ 0.78
PDLIM7-204ENST00000393546 ARNTLO00327 626 aa19.93■□□□□ 0.78
PDLIM7-204ENST00000393546 GLULP15104 373 aa19.93■□□□□ 0.78
PDLIM7-204ENST00000393546 IFNAR2P48551 515 aa19.93■□□□□ 0.78
PDLIM7-204ENST00000393546 SNX16P57768 344 aa19.93■□□□□ 0.78
PDLIM7-204ENST00000393546 ZNF445P59923 1031 aa19.93■□□□□ 0.78
PDLIM7-204ENST00000393546 IER5LQ5T953 404 aa19.93■□□□□ 0.78
PDLIM7-204ENST00000393546 BSPRYQ5W0U4 402 aa19.93■□□□□ 0.78
PDLIM7-204ENST00000393546 RSRC2Q7L4I2 434 aaKnown RBP19.93■□□□□ 0.78
PDLIM7-204ENST00000393546 TMEM110Q86TL2 294 aa19.93■□□□□ 0.78
PDLIM7-204ENST00000393546 PASD1Q8IV76 773 aa19.93■□□□□ 0.78
PDLIM7-204ENST00000393546 FBXL6Q8N531 539 aa19.93■□□□□ 0.78
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms