RNA–Protein interactions for RNA: ENST00000393459.5

SFXN3-202, Transcript of sideroflexin 3, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SFXN3, Length 3,098 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFXN3-202ENST00000393459 TFDP3Q5H9I0 405 aa15.11■□□□□ 0.01
SFXN3-202ENST00000393459 EFHC1Q5JVL4 640 aa15.11■□□□□ 0.01
SFXN3-202ENST00000393459 MYLK4Q86YV6 388 aaPredicted RBP15.11■□□□□ 0.01
SFXN3-202ENST00000393459 TNS4Q8IZW8 715 aa15.11■□□□□ 0.01
SFXN3-202ENST00000393459 PHTF2Q8N3S3 785 aa15.11■□□□□ 0.01
SFXN3-202ENST00000393459 ZNF606Q8WXB4 792 aa15.11■□□□□ 0.01
SFXN3-202ENST00000393459 ACSS3Q9H6R3 686 aa15.11■□□□□ 0.01
SFXN3-202ENST00000393459 COPS7BQ9H9Q2 264 aaPredicted RBP15.11■□□□□ 0.01
SFXN3-202ENST00000393459 RAVER2Q9HCJ3 691 aaKnown RBP15.11■□□□□ 0.01
SFXN3-202ENST00000393459 SENP1Q9P0U3 644 aa15.11■□□□□ 0.01
SFXN3-202ENST00000393459 PI4KBQ9UBF8 816 aa15.11■□□□□ 0.01
SFXN3-202ENST00000393459 TAGLN3Q9UI15 199 aa15.11■□□□□ 0.01
SFXN3-202ENST00000393459 MRPL42Q9Y6G3 142 aaKnown RBP15.11■□□□□ 0.01
SFXN3-202ENST00000393459 CSPG5O95196 566 aa15.11■□□□□ 0.01
SFXN3-202ENST00000393459 CST3P01034 146 aaPredicted RBP15.11■□□□□ 0.01
SFXN3-202ENST00000393459 ITGA2BP08514 1039 aa15.11■□□□□ 0.01
SFXN3-202ENST00000393459 MTMR1Q13613 665 aa15.11■□□□□ 0.01
SFXN3-202ENST00000393459 NADK2Q4G0N4 442 aa15.11■□□□□ 0.01
SFXN3-202ENST00000393459 ADGRD1Q6QNK2 874 aa15.11■□□□□ 0.01
SFXN3-202ENST00000393459 TRIM67Q6ZTA4 783 aa15.11■□□□□ 0.01
SFXN3-202ENST00000393459 AMIGO2Q86SJ2 522 aa15.11■□□□□ 0.01
SFXN3-202ENST00000393459 DCAF4Q8WV16 495 aa15.11■□□□□ 0.01
SFXN3-202ENST00000393459 PPP2R3CQ969Q6 453 aa15.11■□□□□ 0.01
SFXN3-202ENST00000393459 ANKRD27Q96NW4 1050 aa15.11■□□□□ 0.01
SFXN3-202ENST00000393459 MAGEB5Q9BZ81 275 aa15.11■□□□□ 0.01
SFXN3-202ENST00000393459 MRPL47Q9HD33 250 aaKnown RBP15.11■□□□□ 0.01
SFXN3-202ENST00000393459 hCG_1818297A0A087WSY0 165 aa15.11■□□□□ 0.01
SFXN3-202ENST00000393459 A0A0B4J269 797 aa15.11■□□□□ 0.01
SFXN3-202ENST00000393459 STX16-NPEPL1H3BU86 382 aa15.11■□□□□ 0.01
SFXN3-202ENST00000393459 AMHP03971 560 aa15.11■□□□□ 0.01
SFXN3-202ENST00000393459 P4HBP07237 508 aaKnown RBP15.11■□□□□ 0.01
SFXN3-202ENST00000393459 RFX1P22670 979 aa15.11■□□□□ 0.01
SFXN3-202ENST00000393459 ETFBP38117 255 aa15.11■□□□□ 0.01
SFXN3-202ENST00000393459 CCR3P51677 355 aa15.11■□□□□ 0.01
SFXN3-202ENST00000393459 PPM1JQ5JR12 505 aa15.11■□□□□ 0.01
SFXN3-202ENST00000393459 PPIL6Q8IXY8 311 aa15.11■□□□□ 0.01
SFXN3-202ENST00000393459 KATNAL2Q8IYT4 538 aa15.11■□□□□ 0.01
SFXN3-202ENST00000393459 MPP5Q8N3R9 675 aa15.11■□□□□ 0.01
SFXN3-202ENST00000393459 APOPT1Q96IL0 206 aa15.11■□□□□ 0.01
SFXN3-202ENST00000393459 MRPL1Q9BYD6 325 aaKnown RBP15.11■□□□□ 0.01
SFXN3-202ENST00000393459 VPS11Q9H270 941 aa15.11■□□□□ 0.01
SFXN3-202ENST00000393459 ATXN10Q9UBB4 475 aa15.11■□□□□ 0.01
SFXN3-202ENST00000393459 TTLL13PA6NNM8 815 aa15.1■□□□□ 0.01
SFXN3-202ENST00000393459 H3BSA7 217 aa15.1■□□□□ 0.01
SFXN3-202ENST00000393459 CLPTM1O96005 669 aa15.1■□□□□ 0.01
SFXN3-202ENST00000393459 CIITAP33076 1130 aa15.1■□□□□ 0.01
SFXN3-202ENST00000393459 CDH8P55286 799 aa15.1■□□□□ 0.01
SFXN3-202ENST00000393459 CNGA3Q16281 694 aa15.1■□□□□ 0.01
SFXN3-202ENST00000393459 ICA1LQ8NDH6 482 aa15.1■□□□□ 0.01
SFXN3-202ENST00000393459 TMEM161BQ8NDZ6 487 aa15.1■□□□□ 0.01
SFXN3-202ENST00000393459 TARS2Q9BW92 718 aaKnown RBP15.1■□□□□ 0.01
SFXN3-202ENST00000393459 S100A14Q9HCY8 104 aa15.1■□□□□ 0.01
SFXN3-202ENST00000393459 GABBR1Q9UBS5 961 aa15.1■□□□□ 0.01
SFXN3-202ENST00000393459 ZC3H7BQ9UGR2 993 aaKnown RBP15.1■□□□□ 0.01
SFXN3-202ENST00000393459 SLC24A2Q9UI40 661 aa15.1■□□□□ 0.01
SFXN3-202ENST00000393459 A0A088AWK7 358 aa15.1■□□□□ 0.01
SFXN3-202ENST00000393459 KCNN4O15554 427 aa15.1■□□□□ 0.01
SFXN3-202ENST00000393459 ABHD2P08910 425 aa15.1■□□□□ 0.01
SFXN3-202ENST00000393459 NOVP48745 357 aa15.1■□□□□ 0.01
SFXN3-202ENST00000393459 TLR1Q15399 786 aa15.1■□□□□ 0.01
SFXN3-202ENST00000393459 SLC15A2Q16348 729 aa15.1■□□□□ 0.01
SFXN3-202ENST00000393459 KIAA0319LQ8IZA0 1049 aa15.1■□□□□ 0.01
SFXN3-202ENST00000393459 XPO5Q9HAV4 1204 aaKnown RBP eCLIP15.1■□□□□ 0.01
SFXN3-202ENST00000393459 SMYD2Q9NRG4 433 aa15.1■□□□□ 0.01
SFXN3-202ENST00000393459 PARVAQ9NVD7 372 aa15.1■□□□□ 0.01
SFXN3-202ENST00000393459 ZNRF3Q9ULT6 936 aa15.1■□□□□ 0.01
SFXN3-202ENST00000393459 PSTPIP1O43586 416 aa15.09■□□□□ 0.01
SFXN3-202ENST00000393459 ITGBL1O95965 494 aaPredicted RBP15.09■□□□□ 0.01
SFXN3-202ENST00000393459 GPC3P51654 580 aa15.09■□□□□ 0.01
SFXN3-202ENST00000393459 EN1Q05925 392 aaPredicted RBP15.09■□□□□ 0.01
SFXN3-202ENST00000393459 STX3Q13277 289 aa15.09■□□□□ 0.01
SFXN3-202ENST00000393459 KLHL38Q2WGJ6 581 aa15.09■□□□□ 0.01
SFXN3-202ENST00000393459 PPM1LQ5SGD2 360 aa15.09■□□□□ 0.01
SFXN3-202ENST00000393459 KLHL23Q8NBE8 558 aa15.09■□□□□ 0.01
SFXN3-202ENST00000393459 MIPOL1Q8TD10 442 aa15.09■□□□□ 0.01
SFXN3-202ENST00000393459 MIS12Q9H081 205 aa15.09■□□□□ 0.01
SFXN3-202ENST00000393459 LZTS1Q9Y250 596 aa15.09■□□□□ 0.01
SFXN3-202ENST00000393459 SEC24DO94855 1032 aaPredicted RBP15.09■□□□□ 0.01
SFXN3-202ENST00000393459 CSH1P0DML2 217 aa15.09■□□□□ 0.01
SFXN3-202ENST00000393459 CSH2P0DML3 217 aa15.09■□□□□ 0.01
SFXN3-202ENST00000393459 CCR10P46092 362 aa15.09■□□□□ 0.01
SFXN3-202ENST00000393459 MRPS5P82675 430 aaKnown RBP15.09■□□□□ 0.01
SFXN3-202ENST00000393459 LMNB2Q03252 620 aa15.09■□□□□ 0.01
SFXN3-202ENST00000393459 PRKG1Q13976 671 aa15.09■□□□□ 0.01
SFXN3-202ENST00000393459 OASLQ15646 514 aaKnown RBP15.09■□□□□ 0.01
SFXN3-202ENST00000393459 TMEM132AQ24JP5 1023 aa15.09■□□□□ 0.01
SFXN3-202ENST00000393459 STYK1Q6J9G0 422 aa15.09■□□□□ 0.01
SFXN3-202ENST00000393459 SWSAP1Q6NVH7 229 aa15.09■□□□□ 0.01
SFXN3-202ENST00000393459 PODNQ7Z5L7 613 aa15.09■□□□□ 0.01
SFXN3-202ENST00000393459 RCOR2Q8IZ40 523 aa15.09■□□□□ 0.01
SFXN3-202ENST00000393459 ABRAQ8N0Z2 381 aa15.09■□□□□ 0.01
SFXN3-202ENST00000393459 TMIGD2Q96BF3 282 aa15.09■□□□□ 0.01
SFXN3-202ENST00000393459 TAAR1Q96RJ0 339 aa15.09■□□□□ 0.01
SFXN3-202ENST00000393459 ZNF541Q9H0D2 1346 aa15.09■□□□□ 0.01
SFXN3-202ENST00000393459 CDKN2BP42772 138 aa15.08■□□□□ 0.01
SFXN3-202ENST00000393459 NCKAP1LP55160 1127 aa15.08■□□□□ 0.01
SFXN3-202ENST00000393459 TFAMQ00059 246 aaKnown RBP15.08■□□□□ 0.01
SFXN3-202ENST00000393459 TRMT5Q32P41 509 aaKnown RBP15.08■□□□□ 0.01
SFXN3-202ENST00000393459 ACBD5Q5T8D3 534 aaPredicted RBP15.08■□□□□ 0.01
SFXN3-202ENST00000393459 NXNQ6DKJ4 435 aa15.08■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms