RNA–Protein interactions for RNA: ENST00000393357.6

PHTF1-205, Transcript of putative homeodomain transcription factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PHTF1, Length 3,244 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHTF1-205ENST00000393357 MCF2LO15068 1137 aa17■□□□□ 0.31
PHTF1-205ENST00000393357 TFAMQ00059 246 aaKnown RBP17■□□□□ 0.31
PHTF1-205ENST00000393357 OASLQ15646 514 aaKnown RBP17■□□□□ 0.31
PHTF1-205ENST00000393357 TNS4Q8IZW8 715 aa17■□□□□ 0.31
PHTF1-205ENST00000393357 IWS1Q96ST2 819 aa17■□□□□ 0.31
PHTF1-205ENST00000393357 LZTS1Q9Y250 596 aa17■□□□□ 0.31
PHTF1-205ENST00000393357 AFG3L2Q9Y4W6 797 aa17■□□□□ 0.31
PHTF1-205ENST00000393357 CTDP1Q9Y5B0 961 aaPredicted RBP17■□□□□ 0.31
PHTF1-205ENST00000393357 MYO18AQ92614 2054 aaKnown RBP17■□□□□ 0.31
PHTF1-205ENST00000393357 PPEF1O14829 653 aaPredicted RBP17■□□□□ 0.31
PHTF1-205ENST00000393357 CSPG5O95196 566 aa17■□□□□ 0.31
PHTF1-205ENST00000393357 CDH8P55286 799 aa17■□□□□ 0.31
PHTF1-205ENST00000393357 GTF2BQ00403 316 aa17■□□□□ 0.31
PHTF1-205ENST00000393357 DBN1Q16643 649 aa17■□□□□ 0.31
PHTF1-205ENST00000393357 PPM1JQ5JR12 505 aa17■□□□□ 0.31
PHTF1-205ENST00000393357 NXNQ6DKJ4 435 aa17■□□□□ 0.31
PHTF1-205ENST00000393357 NET1Q7Z628 596 aaPredicted RBP17■□□□□ 0.31
PHTF1-205ENST00000393357 AMIGO2Q86SJ2 522 aa17■□□□□ 0.31
PHTF1-205ENST00000393357 TDRPQ86YL5 185 aa17■□□□□ 0.31
PHTF1-205ENST00000393357 MYLK4Q86YV6 388 aaPredicted RBP17■□□□□ 0.31
PHTF1-205ENST00000393357 SPNS2Q8IVW8 549 aa17■□□□□ 0.31
PHTF1-205ENST00000393357 OXCT2Q9BYC2 517 aaPredicted RBP17■□□□□ 0.31
PHTF1-205ENST00000393357 XAB2Q9HCS7 855 aaKnown RBP17■□□□□ 0.31
PHTF1-205ENST00000393357 STRIP2Q9ULQ0 834 aa17■□□□□ 0.31
PHTF1-205ENST00000393357 DTNAQ9Y4J8 743 aa17■□□□□ 0.31
PHTF1-205ENST00000393357 ATP8B3O60423 1300 aa16.99■□□□□ 0.31
PHTF1-205ENST00000393357 TTLL13PA6NNM8 815 aa16.99■□□□□ 0.31
PHTF1-205ENST00000393357 H3BSA7 217 aa16.99■□□□□ 0.31
PHTF1-205ENST00000393357 HNRNPCL1O60812 293 aaKnown RBP16.99■□□□□ 0.31
PHTF1-205ENST00000393357 CDH6P55285 790 aa16.99■□□□□ 0.31
PHTF1-205ENST00000393357 PRKG1Q13976 671 aa16.99■□□□□ 0.31
PHTF1-205ENST00000393357 ACBD5Q5T8D3 534 aaPredicted RBP16.99■□□□□ 0.31
PHTF1-205ENST00000393357 MPP5Q8N3R9 675 aa16.99■□□□□ 0.31
PHTF1-205ENST00000393357 OLFM3Q96PB7 478 aa16.99■□□□□ 0.31
PHTF1-205ENST00000393357 NR1H4Q96RI1 486 aaPredicted RBP16.99■□□□□ 0.31
PHTF1-205ENST00000393357 ASTN2O75129 1339 aaPredicted RBP16.99■□□□□ 0.31
PHTF1-205ENST00000393357 KRT37O76014 449 aa16.99■□□□□ 0.31
PHTF1-205ENST00000393357 UQCRBP14927 111 aa16.99■□□□□ 0.31
PHTF1-205ENST00000393357 NCKAP1LP55160 1127 aa16.99■□□□□ 0.31
PHTF1-205ENST00000393357 PSMC1P62191 440 aaKnown RBP16.99■□□□□ 0.31
PHTF1-205ENST00000393357 TBL3Q12788 808 aaKnown RBP16.99■□□□□ 0.31
PHTF1-205ENST00000393357 LSAMPQ13449 338 aa16.99■□□□□ 0.31
PHTF1-205ENST00000393357 DPYSL3Q14195 570 aa16.99■□□□□ 0.31
PHTF1-205ENST00000393357 TLR1Q15399 786 aa16.99■□□□□ 0.31
PHTF1-205ENST00000393357 TMCO4Q5TGY1 634 aa16.99■□□□□ 0.31
PHTF1-205ENST00000393357 ANO5Q75V66 913 aa16.99■□□□□ 0.31
PHTF1-205ENST00000393357 LENG1Q96BZ8 264 aaPredicted RBP16.99■□□□□ 0.31
PHTF1-205ENST00000393357 SCINQ9Y6U3 715 aa16.99■□□□□ 0.31
PHTF1-205ENST00000393357 STX16-NPEPL1H3BU86 382 aa16.98■□□□□ 0.31
PHTF1-205ENST00000393357 BOLA2-SMG1P6H3BVE0 249 aa16.98■□□□□ 0.31
PHTF1-205ENST00000393357 AMHP03971 560 aa16.98■□□□□ 0.31
PHTF1-205ENST00000393357 CSH1P0DML2 217 aa16.98■□□□□ 0.31
PHTF1-205ENST00000393357 CSH2P0DML3 217 aa16.98■□□□□ 0.31
PHTF1-205ENST00000393357 KRT3P12035 628 aa16.98■□□□□ 0.31
PHTF1-205ENST00000393357 ETV4P43268 484 aa16.98■□□□□ 0.31
PHTF1-205ENST00000393357 COPAP53621 1224 aa16.98■□□□□ 0.31
PHTF1-205ENST00000393357 FASTKD1Q53R41 847 aaKnown RBP16.98■□□□□ 0.31
PHTF1-205ENST00000393357 KIAA0319LQ8IZA0 1049 aa16.98■□□□□ 0.31
PHTF1-205ENST00000393357 SNX31Q8N9S9 440 aa16.98■□□□□ 0.31
PHTF1-205ENST00000393357 IMPG2Q9BZV3 1241 aa16.98■□□□□ 0.31
PHTF1-205ENST00000393357 SMYD2Q9NRG4 433 aa16.98■□□□□ 0.31
PHTF1-205ENST00000393357 STK24Q9Y6E0 443 aa16.98■□□□□ 0.31
PHTF1-205ENST00000393357 ZNF541Q9H0D2 1346 aa16.98■□□□□ 0.31
PHTF1-205ENST00000393357 ENO3P13929 434 aaPredicted RBP16.98■□□□□ 0.31
PHTF1-205ENST00000393357 PSMD7P51665 324 aa16.98■□□□□ 0.31
PHTF1-205ENST00000393357 MRPS5P82675 430 aaKnown RBP16.98■□□□□ 0.31
PHTF1-205ENST00000393357 ATG16L1Q676U5 607 aa16.98■□□□□ 0.31
PHTF1-205ENST00000393357 CIAPIN1Q6FI81 312 aa16.98■□□□□ 0.31
PHTF1-205ENST00000393357 KLHDC10Q6PID8 442 aa16.98■□□□□ 0.31
PHTF1-205ENST00000393357 USP37Q86T82 979 aa16.98■□□□□ 0.31
PHTF1-205ENST00000393357 PDSS2Q86YH6 399 aa16.98■□□□□ 0.31
PHTF1-205ENST00000393357 NAT8LQ8N9F0 302 aa16.98■□□□□ 0.31
PHTF1-205ENST00000393357 GRIN3AQ8TCU5 1115 aa16.98■□□□□ 0.31
PHTF1-205ENST00000393357 FAM172AQ8WUF8 416 aa16.98■□□□□ 0.31
PHTF1-205ENST00000393357 DEPDC1BQ8WUY9 529 aa16.98■□□□□ 0.31
PHTF1-205ENST00000393357 TRIM11Q96F44 468 aa16.98■□□□□ 0.31
PHTF1-205ENST00000393357 AVENQ9NQS1 362 aaPredicted RBP16.98■□□□□ 0.31
PHTF1-205ENST00000393357 AGO2Q9UKV8 859 aaKnown RBP16.98■□□□□ 0.31
PHTF1-205ENST00000393357 FAF1Q9UNN5 650 aaPredicted RBP16.98■□□□□ 0.31
PHTF1-205ENST00000393357 SNCAIPQ9Y6H5 919 aa16.98■□□□□ 0.31
PHTF1-205ENST00000393357 SEC24DO94855 1032 aaPredicted RBP16.98■□□□□ 0.31
PHTF1-205ENST00000393357 ASLP04424 464 aa16.98■□□□□ 0.31
PHTF1-205ENST00000393357 CCR3P51677 355 aa16.98■□□□□ 0.31
PHTF1-205ENST00000393357 SESN2P58004 480 aaPredicted RBP16.98■□□□□ 0.31
PHTF1-205ENST00000393357 WDR75Q8IWA0 830 aaKnown RBP16.98■□□□□ 0.31
PHTF1-205ENST00000393357 ARHGAP18Q8N392 663 aa16.98■□□□□ 0.31
PHTF1-205ENST00000393357 PRMT6Q96LA8 375 aaPredicted RBP16.98■□□□□ 0.31
PHTF1-205ENST00000393357 STRA6Q9BX79 667 aa16.98■□□□□ 0.31
PHTF1-205ENST00000393357 MAGEB5Q9BZ81 275 aa16.98■□□□□ 0.31
PHTF1-205ENST00000393357 MTMR12Q9C0I1 747 aa16.98■□□□□ 0.31
PHTF1-205ENST00000393357 MRPL11Q9Y3B7 192 aaKnown RBP16.98■□□□□ 0.31
PHTF1-205ENST00000393357 COMMD3-BMI1R4GMX3 469 aa16.98■□□□□ 0.31
PHTF1-205ENST00000393357 TMEM191CA6NGB0 347 aa16.97■□□□□ 0.31
PHTF1-205ENST00000393357 VNN1O95497 513 aa16.97■□□□□ 0.31
PHTF1-205ENST00000393357 CCNE2O96020 404 aa16.97■□□□□ 0.31
PHTF1-205ENST00000393357 TMEM191BP0C7N4 346 aa16.97■□□□□ 0.31
PHTF1-205ENST00000393357 ETFBP38117 255 aa16.97■□□□□ 0.31
PHTF1-205ENST00000393357 TNFSF9P41273 254 aa16.97■□□□□ 0.31
PHTF1-205ENST00000393357 NUDT2P50583 147 aa16.97■□□□□ 0.31
PHTF1-205ENST00000393357 CHN2P52757 468 aa16.97■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms