RNA–Protein interactions for RNA: ENST00000391200.1

SNORA40.18-201, Transcript of small nucleolar RNA, H/ACA box 40, humanhuman

BASIC

Gene SNORA40, Length 128 nt, Biotype snoRNA, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNORA40.18-201ENST00000391200 PERM1Q5SV97 790 aa2.04□□□□□ -2.08
SNORA40.18-201ENST00000391200 FREM2Q5SZK8 3169 aa2.04□□□□□ -2.08
SNORA40.18-201ENST00000391200 TPGS2Q68CL5 300 aa2.04□□□□□ -2.08
SNORA40.18-201ENST00000391200 OVOS1Q6IE37 1185 aa2.04□□□□□ -2.08
SNORA40.18-201ENST00000391200 JADE1Q6IE81 842 aa2.04□□□□□ -2.08
SNORA40.18-201ENST00000391200 GALNT17Q6IS24 598 aa2.04□□□□□ -2.08
SNORA40.18-201ENST00000391200 ANO7Q6IWH7 933 aa2.04□□□□□ -2.08
SNORA40.18-201ENST00000391200 RINT1Q6NUQ1 792 aa2.04□□□□□ -2.08
SNORA40.18-201ENST00000391200 PDXDC1Q6P996 788 aa2.04□□□□□ -2.08
SNORA40.18-201ENST00000391200 UNQ6494/PRO21346Q6UXR6 183 aa2.04□□□□□ -2.08
SNORA40.18-201ENST00000391200 PDZRN4Q6ZMN7 1036 aaPredicted RBP2.04□□□□□ -2.08
SNORA40.18-201ENST00000391200 FAM43BQ6ZT52 329 aaPredicted RBP2.04□□□□□ -2.08
SNORA40.18-201ENST00000391200 HS2ST1Q7LGA3 356 aa2.04□□□□□ -2.08
SNORA40.18-201ENST00000391200 DYMQ7RTS9 669 aa2.04□□□□□ -2.08
SNORA40.18-201ENST00000391200 KCNK18Q7Z418 384 aa2.04□□□□□ -2.08
SNORA40.18-201ENST00000391200 SLCO6A1Q86UG4 719 aa2.04□□□□□ -2.08
SNORA40.18-201ENST00000391200 FAM124AQ86V42 546 aa2.04□□□□□ -2.08
SNORA40.18-201ENST00000391200 RALGPS2Q86X27 583 aaPredicted RBP2.04□□□□□ -2.08
SNORA40.18-201ENST00000391200 CCDC83Q8IWF9 413 aa2.04□□□□□ -2.08
SNORA40.18-201ENST00000391200 EFCAB13Q8IY85 973 aa2.04□□□□□ -2.08
SNORA40.18-201ENST00000391200 DIS3L2Q8IYB7 885 aaKnown RBP2.04□□□□□ -2.08
SNORA40.18-201ENST00000391200 TCEAL8Q8IYN2 117 aa2.04□□□□□ -2.08
SNORA40.18-201ENST00000391200 RNF168Q8IYW5 571 aaPredicted RBP2.04□□□□□ -2.08
SNORA40.18-201ENST00000391200 ADGRG2Q8IZP9 1017 aa2.04□□□□□ -2.08
SNORA40.18-201ENST00000391200 CSGALNACT2Q8N6G5 542 aa2.04□□□□□ -2.08
SNORA40.18-201ENST00000391200 ALLCQ8N6M5 410 aa2.04□□□□□ -2.08
SNORA40.18-201ENST00000391200 ZNF713Q8N859 430 aaPredicted RBP2.04□□□□□ -2.08
SNORA40.18-201ENST00000391200 TXNDC5Q8NBS9 432 aaKnown RBP2.04□□□□□ -2.08
SNORA40.18-201ENST00000391200 ZSWIM2Q8NEG5 633 aa2.04□□□□□ -2.08
SNORA40.18-201ENST00000391200 CXorf38Q8TB03 319 aa2.04□□□□□ -2.08
SNORA40.18-201ENST00000391200 MDM1Q8TC05 714 aa2.04□□□□□ -2.08
SNORA40.18-201ENST00000391200 NELL1Q92832 810 aa2.04□□□□□ -2.08
SNORA40.18-201ENST00000391200 USP13Q92995 863 aaPredicted RBP2.04□□□□□ -2.08
SNORA40.18-201ENST00000391200 SUSD3Q96L08 255 aa2.04□□□□□ -2.08
SNORA40.18-201ENST00000391200 DRC1Q96MC2 740 aa2.04□□□□□ -2.08
SNORA40.18-201ENST00000391200 MMS19Q96T76 1030 aa2.04□□□□□ -2.08
SNORA40.18-201ENST00000391200 P2RY13Q9BPV8 354 aa2.04□□□□□ -2.08
SNORA40.18-201ENST00000391200 PYM1Q9BRP8 204 aaKnown RBP2.04□□□□□ -2.08
SNORA40.18-201ENST00000391200 POLR3CQ9BUI4 534 aaPredicted RBP2.04□□□□□ -2.08
SNORA40.18-201ENST00000391200 LRRC3Q9BY71 257 aa2.04□□□□□ -2.08
SNORA40.18-201ENST00000391200 MRPL4Q9BYD3 311 aaKnown RBP2.04□□□□□ -2.08
SNORA40.18-201ENST00000391200 FAM126AQ9BYI3 521 aaPredicted RBP2.04□□□□□ -2.08
SNORA40.18-201ENST00000391200 C22orf23Q9BZE7 217 aa2.04□□□□□ -2.08
SNORA40.18-201ENST00000391200 CEP295Q9C0D2 2601 aa2.04□□□□□ -2.08
SNORA40.18-201ENST00000391200 GPR88Q9GZN0 384 aa2.04□□□□□ -2.08
SNORA40.18-201ENST00000391200 SCAND2PQ9GZW5 306 aaPredicted RBP2.04□□□□□ -2.08
SNORA40.18-201ENST00000391200 RNF38Q9H0F5 515 aa2.04□□□□□ -2.08
SNORA40.18-201ENST00000391200 OSBPL2Q9H1P3 480 aa2.04□□□□□ -2.08
SNORA40.18-201ENST00000391200 SLC6A17Q9H1V8 727 aa2.04□□□□□ -2.08
SNORA40.18-201ENST00000391200 DNAJC25Q9H1X3 360 aa2.04□□□□□ -2.08
SNORA40.18-201ENST00000391200 CDT1Q9H211 546 aa2.04□□□□□ -2.08
SNORA40.18-201ENST00000391200 KCNF1Q9H3M0 494 aa2.04□□□□□ -2.08
SNORA40.18-201ENST00000391200 TASP1Q9H6P5 420 aa2.04□□□□□ -2.08
SNORA40.18-201ENST00000391200 C8orf33Q9H7E9 229 aaPredicted RBP2.04□□□□□ -2.08
SNORA40.18-201ENST00000391200 RPF1Q9H9Y2 349 aaKnown RBP2.04□□□□□ -2.08
SNORA40.18-201ENST00000391200 ETNK1Q9HBU6 452 aa2.04□□□□□ -2.08
SNORA40.18-201ENST00000391200 KCNMB3Q9NPA1 279 aa2.04□□□□□ -2.08
SNORA40.18-201ENST00000391200 VPS45Q9NRW7 570 aa2.04□□□□□ -2.08
SNORA40.18-201ENST00000391200 TMLHEQ9NVH6 421 aa2.04□□□□□ -2.08
SNORA40.18-201ENST00000391200 SMPD4Q9NXE4 827 aa2.04□□□□□ -2.08
SNORA40.18-201ENST00000391200 ABI2Q9NYB9 513 aaPredicted RBP2.04□□□□□ -2.08
SNORA40.18-201ENST00000391200 KCNK4Q9NYG8 393 aa2.04□□□□□ -2.08
SNORA40.18-201ENST00000391200 STK39Q9UEW8 545 aa2.04□□□□□ -2.08
SNORA40.18-201ENST00000391200 TUBGCP4Q9UGJ1 667 aa2.04□□□□□ -2.08
SNORA40.18-201ENST00000391200 ZC3H7BQ9UGR2 993 aaKnown RBP2.04□□□□□ -2.08
SNORA40.18-201ENST00000391200 AFF4Q9UHB7 1163 aaKnown RBP2.04□□□□□ -2.08
SNORA40.18-201ENST00000391200 NUDT5Q9UKK9 219 aa2.04□□□□□ -2.08
SNORA40.18-201ENST00000391200 GTF3C4Q9UKN8 822 aa2.04□□□□□ -2.08
SNORA40.18-201ENST00000391200 AGAP1Q9UPQ3 857 aa2.04□□□□□ -2.08
SNORA40.18-201ENST00000391200 PCDHB6Q9Y5E3 794 aa2.04□□□□□ -2.08
SNORA40.18-201ENST00000391200 RAI2Q9Y5P3 530 aa2.04□□□□□ -2.08
SNORA40.18-201ENST00000391200 BACE2Q9Y5Z0 518 aa2.04□□□□□ -2.08
SNORA40.18-201ENST00000391200 WNT6Q9Y6F9 365 aa2.04□□□□□ -2.08
SNORA40.18-201ENST00000391200 PRRC2CQ9Y520 2896 aaKnown RBP2.04□□□□□ -2.08
SNORA40.18-201ENST00000391200 TENM4Q6N022 2769 aa2.04□□□□□ -2.08
SNORA40.18-201ENST00000391200 ZFYVE26Q68DK2 2539 aa2.03□□□□□ -2.08
SNORA40.18-201ENST00000391200 ACACAQ13085 2346 aa2.03□□□□□ -2.08
SNORA40.18-201ENST00000391200 COL6A6A6NMZ7 2263 aa2.03□□□□□ -2.08
SNORA40.18-201ENST00000391200 KIAA1549LQ6ZVL6 1849 aa2.03□□□□□ -2.08
SNORA40.18-201ENST00000391200 TNRC6BQ9UPQ9 1833 aaKnown RBP2.03□□□□□ -2.08
SNORA40.18-201ENST00000391200 KALRNO60229 2985 aa2.03□□□□□ -2.08
SNORA40.18-201ENST00000391200 ATXN2Q99700 1313 aaKnown RBP2.03□□□□□ -2.08
SNORA40.18-201ENST00000391200 MYBPHLA2RUH7 354 aa2.03□□□□□ -2.08
SNORA40.18-201ENST00000391200 VWA3AA6NCI4 1184 aa2.03□□□□□ -2.08
SNORA40.18-201ENST00000391200 CYSRT1A8MQ03 144 aa2.03□□□□□ -2.08
SNORA40.18-201ENST00000391200 KPNA7A9QM74 516 aa2.03□□□□□ -2.08
SNORA40.18-201ENST00000391200 SGK1O00141 431 aa2.03□□□□□ -2.08
SNORA40.18-201ENST00000391200 CLDN5O00501 218 aa2.03□□□□□ -2.08
SNORA40.18-201ENST00000391200 TRDMT1O14717 391 aaKnown RBP2.03□□□□□ -2.08
SNORA40.18-201ENST00000391200 CYP26A1O43174 497 aa2.03□□□□□ -2.08
SNORA40.18-201ENST00000391200 PFKFB2O60825 505 aa2.03□□□□□ -2.08
SNORA40.18-201ENST00000391200 NDUFS2O75306 463 aa2.03□□□□□ -2.08
SNORA40.18-201ENST00000391200 CDKL5O76039 1030 aa2.03□□□□□ -2.08
SNORA40.18-201ENST00000391200 REC8O95072 547 aa2.03□□□□□ -2.08
SNORA40.18-201ENST00000391200 OAZ2O95190 189 aa2.03□□□□□ -2.08
SNORA40.18-201ENST00000391200 APBB3O95704 486 aa2.03□□□□□ -2.08
SNORA40.18-201ENST00000391200 TBX18O95935 607 aa2.03□□□□□ -2.08
SNORA40.18-201ENST00000391200 CST3P01034 146 aaPredicted RBP2.03□□□□□ -2.08
SNORA40.18-201ENST00000391200 CKMP06732 381 aa2.03□□□□□ -2.08
SNORA40.18-201ENST00000391200 HMBSP08397 361 aa2.03□□□□□ -2.08
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms