RNA–Protein interactions for RNA: ENST00000390497.1

TRAJ40-201, Transcript of T cell receptor alpha joining 40, humanhuman

APPRIS P1 BASIC

Gene TRAJ40, Length 61 nt, Biotype TR J gene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAJ40-201ENST00000390497 HSP90AA1P07900 732 aaKnown RBP3.36□□□□□ -1.87
TRAJ40-201ENST00000390497 CKMT1AP12532 417 aa3.36□□□□□ -1.87
TRAJ40-201ENST00000390497 MMP8P22894 467 aa3.36□□□□□ -1.87
TRAJ40-201ENST00000390497 DDX6P26196 483 aaKnown RBP eCLIP3.36□□□□□ -1.87
TRAJ40-201ENST00000390497 ELF1P32519 619 aa3.36□□□□□ -1.87
TRAJ40-201ENST00000390497 GSTM5P46439 218 aa3.36□□□□□ -1.87
TRAJ40-201ENST00000390497 PNLIPRP1P54315 467 aa3.36□□□□□ -1.87
TRAJ40-201ENST00000390497 MC2RQ01718 297 aa3.36□□□□□ -1.87
TRAJ40-201ENST00000390497 UBE3AQ05086 875 aa3.36□□□□□ -1.87
TRAJ40-201ENST00000390497 G3BP1Q13283 466 aaKnown RBP eCLIP3.36□□□□□ -1.87
TRAJ40-201ENST00000390497 TRPC3Q13507 836 aa3.36□□□□□ -1.87
TRAJ40-201ENST00000390497 GRM4Q14833 912 aa3.36□□□□□ -1.87
TRAJ40-201ENST00000390497 BEAN1Q3B7T3 259 aa3.36□□□□□ -1.87
TRAJ40-201ENST00000390497 TBC1D25Q3MII6 688 aa3.36□□□□□ -1.87
TRAJ40-201ENST00000390497 HYIQ5T013 277 aa3.36□□□□□ -1.87
TRAJ40-201ENST00000390497 VPS53Q5VIR6 699 aa3.36□□□□□ -1.87
TRAJ40-201ENST00000390497 LIN54Q6MZP7 749 aa3.36□□□□□ -1.87
TRAJ40-201ENST00000390497 CLEC9AQ6UXN8 241 aa3.36□□□□□ -1.87
TRAJ40-201ENST00000390497 RSRC2Q7L4I2 434 aaKnown RBP3.36□□□□□ -1.87
TRAJ40-201ENST00000390497 TRABD2AQ86V40 505 aa3.36□□□□□ -1.87
TRAJ40-201ENST00000390497 LRRTM4Q86VH4 590 aa3.36□□□□□ -1.87
TRAJ40-201ENST00000390497 SUGP1Q8IWZ8 645 aaKnown RBP3.36□□□□□ -1.87
TRAJ40-201ENST00000390497 SYNE4Q8N205 404 aa3.36□□□□□ -1.87
TRAJ40-201ENST00000390497 LNX2Q8N448 690 aa3.36□□□□□ -1.87
TRAJ40-201ENST00000390497 B3GALNT2Q8NCR0 500 aa3.36□□□□□ -1.87
TRAJ40-201ENST00000390497 SCAMP5Q8TAC9 235 aa3.36□□□□□ -1.87
TRAJ40-201ENST00000390497 HERVK_113Q902F9 699 aa3.36□□□□□ -1.87
TRAJ40-201ENST00000390497 TMEM125Q96AQ2 219 aa3.36□□□□□ -1.87
TRAJ40-201ENST00000390497 NACC2Q96BF6 587 aa3.36□□□□□ -1.87
TRAJ40-201ENST00000390497 C3orf49Q96BT1 292 aa3.36□□□□□ -1.87
TRAJ40-201ENST00000390497 RNF31Q96EP0 1072 aa3.36□□□□□ -1.87
TRAJ40-201ENST00000390497 PTCD3Q96EY7 689 aaKnown RBP3.36□□□□□ -1.87
TRAJ40-201ENST00000390497 ZBTB45Q96K62 511 aaPredicted RBP3.36□□□□□ -1.87
TRAJ40-201ENST00000390497 EIF3CQ99613 913 aaKnown RBP3.36□□□□□ -1.87
TRAJ40-201ENST00000390497 EIF2AK1Q9BQI3 630 aaKnown RBP3.36□□□□□ -1.87
TRAJ40-201ENST00000390497 PAAF1Q9BRP4 392 aa3.36□□□□□ -1.87
TRAJ40-201ENST00000390497 ACTRT3Q9BYD9 372 aa3.36□□□□□ -1.87
TRAJ40-201ENST00000390497 VPS16Q9H269 839 aa3.36□□□□□ -1.87
TRAJ40-201ENST00000390497 ELAC1Q9H777 363 aaKnown RBP3.36□□□□□ -1.87
TRAJ40-201ENST00000390497 MLXIPQ9HAP2 919 aa3.36□□□□□ -1.87
TRAJ40-201ENST00000390497 GLOD4Q9HC38 313 aa3.36□□□□□ -1.87
TRAJ40-201ENST00000390497 LPAR3Q9UBY5 353 aa3.36□□□□□ -1.87
TRAJ40-201ENST00000390497 SERTAD3Q9UJW9 196 aa3.36□□□□□ -1.87
TRAJ40-201ENST00000390497 FEM1BQ9UK73 627 aa3.36□□□□□ -1.87
TRAJ40-201ENST00000390497 DAPP1Q9UN19 280 aa3.36□□□□□ -1.87
TRAJ40-201ENST00000390497 SLC27A6Q9Y2P4 619 aa3.36□□□□□ -1.87
TRAJ40-201ENST00000390497 CRYL1Q9Y2S2 319 aa3.36□□□□□ -1.87
TRAJ40-201ENST00000390497 ZBTB32Q9Y2Y4 487 aaPredicted RBP3.36□□□□□ -1.87
TRAJ40-201ENST00000390497 LMTK3Q96Q04 1460 aa3.35□□□□□ -1.87
TRAJ40-201ENST00000390497 A1L4Q6 167 aa3.35□□□□□ -1.87
TRAJ40-201ENST00000390497 TMEM200CA6NKL6 621 aa3.35□□□□□ -1.87
TRAJ40-201ENST00000390497 ADM5C9JUS6 153 aa3.35□□□□□ -1.87
TRAJ40-201ENST00000390497 E7EVH7 732 aa3.35□□□□□ -1.87
TRAJ40-201ENST00000390497 EXOC5O00471 708 aa3.35□□□□□ -1.87
TRAJ40-201ENST00000390497 PPM1DO15297 605 aa3.35□□□□□ -1.87
TRAJ40-201ENST00000390497 DHHO43323 396 aa3.35□□□□□ -1.87
TRAJ40-201ENST00000390497 NCR1O76036 304 aa3.35□□□□□ -1.87
TRAJ40-201ENST00000390497 WDR47O94967 919 aa3.35□□□□□ -1.87
TRAJ40-201ENST00000390497 NDUFA10O95299 355 aa3.35□□□□□ -1.87
TRAJ40-201ENST00000390497 DLDP09622 509 aaKnown RBP3.35□□□□□ -1.87
TRAJ40-201ENST00000390497 TMEM225BP0DP42 221 aa3.35□□□□□ -1.87
TRAJ40-201ENST00000390497 GYS1P13807 737 aa3.35□□□□□ -1.87
TRAJ40-201ENST00000390497 HGFP14210 728 aa3.35□□□□□ -1.87
TRAJ40-201ENST00000390497 KRT9P35527 623 aa3.35□□□□□ -1.87
TRAJ40-201ENST00000390497 SELENOPP49908 381 aa3.35□□□□□ -1.87
TRAJ40-201ENST00000390497 ATXN1P54253 815 aaKnown RBP3.35□□□□□ -1.87
TRAJ40-201ENST00000390497 EIF5P55010 431 aaKnown RBP3.35□□□□□ -1.87
TRAJ40-201ENST00000390497 BLOC1S1P78537 153 aa3.35□□□□□ -1.87
TRAJ40-201ENST00000390497 GUCY1B3Q02153 619 aa3.35□□□□□ -1.87
TRAJ40-201ENST00000390497 CHRNDQ07001 517 aa3.35□□□□□ -1.87
TRAJ40-201ENST00000390497 MAPK7Q13164 816 aa3.35□□□□□ -1.87
TRAJ40-201ENST00000390497 SEMA3BQ13214 749 aa3.35□□□□□ -1.87
TRAJ40-201ENST00000390497 CUL4BQ13620 913 aa3.35□□□□□ -1.87
TRAJ40-201ENST00000390497 TOB2Q14106 344 aaPredicted RBP3.35□□□□□ -1.87
TRAJ40-201ENST00000390497 KCNJ12Q14500 433 aa3.35□□□□□ -1.87
TRAJ40-201ENST00000390497 PTPRRQ15256 657 aa3.35□□□□□ -1.87
TRAJ40-201ENST00000390497 SMAD1Q15797 465 aaKnown RBP3.35□□□□□ -1.87
TRAJ40-201ENST00000390497 GEN1Q17RS7 908 aa3.35□□□□□ -1.87
TRAJ40-201ENST00000390497 PLAC9Q5JTB6 97 aa3.35□□□□□ -1.87
TRAJ40-201ENST00000390497 ZNF618Q5T7W0 954 aa3.35□□□□□ -1.87
TRAJ40-201ENST00000390497 TTC22Q5TAA0 569 aa3.35□□□□□ -1.87
TRAJ40-201ENST00000390497 DEPDC1Q5TB30 811 aa3.35□□□□□ -1.87
TRAJ40-201ENST00000390497 DENND2CQ68D51 928 aa3.35□□□□□ -1.87
TRAJ40-201ENST00000390497 FAAH2Q6GMR7 532 aa3.35□□□□□ -1.87
TRAJ40-201ENST00000390497 CLEC4GQ6UXB4 293 aa3.35□□□□□ -1.87
TRAJ40-201ENST00000390497 MAATS1Q7Z4T9 603 aa3.35□□□□□ -1.87
TRAJ40-201ENST00000390497 ESX1Q8N693 406 aa3.35□□□□□ -1.87
TRAJ40-201ENST00000390497 CPEB3Q8NE35 698 aaKnown RBP3.35□□□□□ -1.87
TRAJ40-201ENST00000390497 OR1N1Q8NGS0 311 aa3.35□□□□□ -1.87
TRAJ40-201ENST00000390497 TMEM171Q8WVE6 324 aa3.35□□□□□ -1.87
TRAJ40-201ENST00000390497 HMGB4Q8WW32 186 aa3.35□□□□□ -1.87
TRAJ40-201ENST00000390497 SOCS4Q8WXH5 440 aa3.35□□□□□ -1.87
TRAJ40-201ENST00000390497 ASB12Q8WXK4 309 aa3.35□□□□□ -1.87
TRAJ40-201ENST00000390497 ATG4AQ8WYN0 398 aa3.35□□□□□ -1.87
TRAJ40-201ENST00000390497 HDAC2Q92769 488 aaKnown RBP3.35□□□□□ -1.87
TRAJ40-201ENST00000390497 WWC2-AS2Q96NR7 200 aa3.35□□□□□ -1.87
TRAJ40-201ENST00000390497 DPCDQ9BVM2 203 aaPredicted RBP3.35□□□□□ -1.87
TRAJ40-201ENST00000390497 SLC26A6Q9BXS9 759 aa3.35□□□□□ -1.87
TRAJ40-201ENST00000390497 CD248Q9HCU0 757 aa3.35□□□□□ -1.87
TRAJ40-201ENST00000390497 G6PC2Q9NQR9 355 aa3.35□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms