RNA–Protein interactions for RNA: ENST00000390466.1

TRAV39-201, Transcript of T cell receptor alpha variable 39, humanhuman

APPRIS P1 BASIC

Gene TRAV39, Length 331 nt, Biotype TR V gene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV39-201ENST00000390466 C1orf228Q6PIY5 440 aa3.59□□□□□ -1.83
TRAV39-201ENST00000390466 MAMDC4Q6UXC1 1216 aa3.59□□□□□ -1.83
TRAV39-201ENST00000390466 TIFABQ6ZNK6 161 aa3.59□□□□□ -1.83
TRAV39-201ENST00000390466 DENND5BQ6ZUT9 1274 aa3.59□□□□□ -1.83
TRAV39-201ENST00000390466 NCCRP1Q6ZVX7 275 aaPredicted RBP3.59□□□□□ -1.83
TRAV39-201ENST00000390466 BBS12Q6ZW61 710 aa3.59□□□□□ -1.83
TRAV39-201ENST00000390466 CYP4V2Q6ZWL3 525 aaPredicted RBP3.59□□□□□ -1.83
TRAV39-201ENST00000390466 ZNF365Q70YC5 407 aa3.59□□□□□ -1.83
TRAV39-201ENST00000390466 CENPUQ71F23 418 aa3.59□□□□□ -1.83
TRAV39-201ENST00000390466 ZNF534Q76KX8 674 aa3.59□□□□□ -1.83
TRAV39-201ENST00000390466 TAS1R3Q7RTX0 852 aa3.59□□□□□ -1.83
TRAV39-201ENST00000390466 PRPF39Q86UA1 669 aaKnown RBP3.59□□□□□ -1.83
TRAV39-201ENST00000390466 RASSF3Q86WH2 238 aa3.59□□□□□ -1.83
TRAV39-201ENST00000390466 AMIGO3Q86WK7 504 aa3.59□□□□□ -1.83
TRAV39-201ENST00000390466 CARM1Q86X55 608 aa3.59□□□□□ -1.83
TRAV39-201ENST00000390466 ZNF677Q86XU0 584 aa3.59□□□□□ -1.83
TRAV39-201ENST00000390466 ANKMY2Q8IV38 441 aa3.59□□□□□ -1.83
TRAV39-201ENST00000390466 RHOT1Q8IXI2 618 aa3.59□□□□□ -1.83
TRAV39-201ENST00000390466 FAM178BQ8IXR5 827 aa3.59□□□□□ -1.83
TRAV39-201ENST00000390466 CPNE9Q8IYJ1 553 aa3.59□□□□□ -1.83
TRAV39-201ENST00000390466 RTKN2Q8IZC4 609 aa3.59□□□□□ -1.83
TRAV39-201ENST00000390466 ARHGAP24Q8N264 748 aa3.59□□□□□ -1.83
TRAV39-201ENST00000390466 CERS5Q8N5B7 392 aa3.59□□□□□ -1.83
TRAV39-201ENST00000390466 MYCT1Q8N699 235 aa3.59□□□□□ -1.83
TRAV39-201ENST00000390466 ARFGAP1Q8N6T3 406 aa3.59□□□□□ -1.83
TRAV39-201ENST00000390466 POU5F2Q8N7G0 328 aa3.59□□□□□ -1.83
TRAV39-201ENST00000390466 TMEM102Q8N9M5 508 aaPredicted RBP3.59□□□□□ -1.83
TRAV39-201ENST00000390466 TTC13Q8NBP0 860 aa3.59□□□□□ -1.83
TRAV39-201ENST00000390466 PIP4K2CQ8TBX8 421 aa3.59□□□□□ -1.83
TRAV39-201ENST00000390466 DCAF4Q8WV16 495 aa3.59□□□□□ -1.83
TRAV39-201ENST00000390466 STON2Q8WXE9 905 aa3.59□□□□□ -1.83
TRAV39-201ENST00000390466 HSPH1Q92598 858 aa3.59□□□□□ -1.83
TRAV39-201ENST00000390466 ZNF516Q92618 1163 aa3.59□□□□□ -1.83
TRAV39-201ENST00000390466 USP6NLQ92738 828 aa3.59□□□□□ -1.83
TRAV39-201ENST00000390466 TEKT1Q969V4 418 aa3.59□□□□□ -1.83
TRAV39-201ENST00000390466 MCUR1Q96AQ8 359 aa3.59□□□□□ -1.83
TRAV39-201ENST00000390466 ELMO3Q96BJ8 720 aa3.59□□□□□ -1.83
TRAV39-201ENST00000390466 ITPKCQ96DU7 683 aa3.59□□□□□ -1.83
TRAV39-201ENST00000390466 HSPBAP1Q96EW2 488 aa3.59□□□□□ -1.83
TRAV39-201ENST00000390466 VCPIP1Q96JH7 1222 aa3.59□□□□□ -1.83
TRAV39-201ENST00000390466 CLMNQ96JQ2 1002 aa3.59□□□□□ -1.83
TRAV39-201ENST00000390466 ZFRQ96KR1 1074 aaKnown RBP3.59□□□□□ -1.83
TRAV39-201ENST00000390466 ZNF512Q96ME7 567 aaPredicted RBP3.59□□□□□ -1.83
TRAV39-201ENST00000390466 SRPK1Q96SB4 655 aaKnown RBP3.59□□□□□ -1.83
TRAV39-201ENST00000390466 UHRF1Q96T88 793 aaPredicted RBP3.59□□□□□ -1.83
TRAV39-201ENST00000390466 CYTH2Q99418 400 aa3.59□□□□□ -1.83
TRAV39-201ENST00000390466 TTC1Q99614 292 aa3.59□□□□□ -1.83
TRAV39-201ENST00000390466 DOK1Q99704 481 aa3.59□□□□□ -1.83
TRAV39-201ENST00000390466 CORO1BQ9BR76 489 aa3.59□□□□□ -1.83
TRAV39-201ENST00000390466 THTPAQ9BU02 230 aa3.59□□□□□ -1.83
TRAV39-201ENST00000390466 MECRQ9BV79 373 aa3.59□□□□□ -1.83
TRAV39-201ENST00000390466 HEMGNQ9BXL5 484 aa3.59□□□□□ -1.83
TRAV39-201ENST00000390466 SLC13A1Q9BZW2 595 aa3.59□□□□□ -1.83
TRAV39-201ENST00000390466 GRIP2Q9C0E4 1043 aa3.59□□□□□ -1.83
TRAV39-201ENST00000390466 KLHL4Q9C0H6 718 aa3.59□□□□□ -1.83
TRAV39-201ENST00000390466 MAF1Q9H063 256 aa3.59□□□□□ -1.83
TRAV39-201ENST00000390466 KLC2Q9H0B6 622 aa3.59□□□□□ -1.83
TRAV39-201ENST00000390466 BRD8Q9H0E9 1235 aa3.59□□□□□ -1.83
TRAV39-201ENST00000390466 WWP1Q9H0M0 922 aa3.59□□□□□ -1.83
TRAV39-201ENST00000390466 DEFB129Q9H1M3 183 aa3.59□□□□□ -1.83
TRAV39-201ENST00000390466 UNC45AQ9H3U1 944 aa3.59□□□□□ -1.83
TRAV39-201ENST00000390466 PDZD7Q9H5P4 517 aa3.59□□□□□ -1.83
TRAV39-201ENST00000390466 STN1Q9H668 368 aaKnown RBP3.59□□□□□ -1.83
TRAV39-201ENST00000390466 VPS37BQ9H9H4 285 aa3.59□□□□□ -1.83
TRAV39-201ENST00000390466 UGT1A7Q9HAW7 530 aa3.59□□□□□ -1.83
TRAV39-201ENST00000390466 UGT1A10Q9HAW8 530 aa3.59□□□□□ -1.83
TRAV39-201ENST00000390466 UGT1A8Q9HAW9 530 aa3.59□□□□□ -1.83
TRAV39-201ENST00000390466 ZNF287Q9HBT7 754 aa3.59□□□□□ -1.83
TRAV39-201ENST00000390466 TMEM8AQ9HCN3 771 aa3.59□□□□□ -1.83
TRAV39-201ENST00000390466 XPNPEP1Q9NQW7 623 aa3.59□□□□□ -1.83
TRAV39-201ENST00000390466 SEPT11Q9NVA2 429 aaKnown RBP3.59□□□□□ -1.83
TRAV39-201ENST00000390466 SLC38A7Q9NVC3 462 aa3.59□□□□□ -1.83
TRAV39-201ENST00000390466 KLHL11Q9NVR0 708 aa3.59□□□□□ -1.83
TRAV39-201ENST00000390466 DNMT3BQ9UBC3 853 aaKnown RBP3.59□□□□□ -1.83
TRAV39-201ENST00000390466 PPARGC1AQ9UBK2 798 aaKnown RBP3.59□□□□□ -1.83
TRAV39-201ENST00000390466 CDH22Q9UJ99 828 aa3.59□□□□□ -1.83
TRAV39-201ENST00000390466 ZNF180Q9UJW8 692 aa3.59□□□□□ -1.83
TRAV39-201ENST00000390466 RAB26Q9ULW5 256 aa3.59□□□□□ -1.83
TRAV39-201ENST00000390466 EXOC7Q9UPT5 735 aa3.59□□□□□ -1.83
TRAV39-201ENST00000390466 SORCS3Q9UPU3 1222 aa3.59□□□□□ -1.83
TRAV39-201ENST00000390466 CHMP2BQ9UQN3 213 aa3.59□□□□□ -1.83
TRAV39-201ENST00000390466 EFR3BQ9Y2G0 817 aa3.59□□□□□ -1.83
TRAV39-201ENST00000390466 FRMD4BQ9Y2L6 1034 aa3.59□□□□□ -1.83
TRAV39-201ENST00000390466 PLLPQ9Y342 182 aa3.59□□□□□ -1.83
TRAV39-201ENST00000390466 DTNAQ9Y4J8 743 aa3.59□□□□□ -1.83
TRAV39-201ENST00000390466 PCDHAC2Q9Y5I4 1007 aa3.59□□□□□ -1.83
TRAV39-201ENST00000390466 GTF3C5Q9Y5Q8 519 aaPredicted RBP3.59□□□□□ -1.83
TRAV39-201ENST00000390466 AP4B1Q9Y6B7 739 aa3.59□□□□□ -1.83
TRAV39-201ENST00000390466 ALPK3Q96L96 1907 aa3.59□□□□□ -1.83
TRAV39-201ENST00000390466 PTPRJQ12913 1337 aa3.59□□□□□ -1.83
TRAV39-201ENST00000390466 PLXNB2O15031 1838 aa3.58□□□□□ -1.84
TRAV39-201ENST00000390466 C7orf72A4D263 438 aa3.58□□□□□ -1.84
TRAV39-201ENST00000390466 FAM159BA6NKW6 160 aa3.58□□□□□ -1.84
TRAV39-201ENST00000390466 SOBPA7XYQ1 873 aa3.58□□□□□ -1.84
TRAV39-201ENST00000390466 TRIM49D1C9J1S8 452 aa3.58□□□□□ -1.84
TRAV39-201ENST00000390466 KBTBD13C9JR72 458 aa3.58□□□□□ -1.84
TRAV39-201ENST00000390466 PI4K2BG5E9Z4 385 aa3.58□□□□□ -1.84
TRAV39-201ENST00000390466 H0YJX3 145 aa3.58□□□□□ -1.84
TRAV39-201ENST00000390466 C6orf229H3BNL8 230 aa3.58□□□□□ -1.84
TRAV39-201ENST00000390466 H3BSA7 217 aa3.58□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms