RNA–Protein interactions for RNA: ENST00000390009.7

ACTN4-202, Transcript of actinin alpha 4, humanhuman

TSL 1 (best) BASIC

Gene ACTN4, Length 2,102 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN4-202ENST00000390009 CENPIQ92674 756 aaPredicted RBP18.98■□□□□ 0.63
ACTN4-202ENST00000390009 P3H4Q92791 437 aa18.98■□□□□ 0.63
ACTN4-202ENST00000390009 C9orf72Q96LT7 481 aa18.98■□□□□ 0.63
ACTN4-202ENST00000390009 ADAM33Q9BZ11 813 aa18.98■□□□□ 0.63
ACTN4-202ENST00000390009 PCDH18Q9HCL0 1135 aa18.98■□□□□ 0.63
ACTN4-202ENST00000390009 SHOC2Q9UQ13 582 aa18.98■□□□□ 0.63
ACTN4-202ENST00000390009 BRCA2P51587 3418 aa18.98■□□□□ 0.63
ACTN4-202ENST00000390009 KIF3CO14782 793 aa18.98■□□□□ 0.63
ACTN4-202ENST00000390009 ZNF623O75123 536 aa18.98■□□□□ 0.63
ACTN4-202ENST00000390009 BEST1O76090 585 aa18.98■□□□□ 0.63
ACTN4-202ENST00000390009 MAGEA4P43358 317 aa18.98■□□□□ 0.63
ACTN4-202ENST00000390009 IFI35P80217 286 aaPredicted RBP18.98■□□□□ 0.63
ACTN4-202ENST00000390009 PPARDQ03181 441 aa18.98■□□□□ 0.63
ACTN4-202ENST00000390009 ADIGQ0VDE8 80 aa18.98■□□□□ 0.63
ACTN4-202ENST00000390009 CA9Q16790 459 aa18.98■□□□□ 0.63
ACTN4-202ENST00000390009 MDH1BQ5I0G3 518 aa18.98■□□□□ 0.63
ACTN4-202ENST00000390009 MFSD5Q6N075 450 aa18.98■□□□□ 0.63
ACTN4-202ENST00000390009 TMEM86AQ8N2M4 240 aa18.98■□□□□ 0.63
ACTN4-202ENST00000390009 BCAS4Q8TDM0 211 aa18.98■□□□□ 0.63
ACTN4-202ENST00000390009 CEP350Q5VT06 3117 aa18.97■□□□□ 0.63
ACTN4-202ENST00000390009 CASTOR2A6NHX0 329 aa18.97■□□□□ 0.63
ACTN4-202ENST00000390009 RAB27AP51159 221 aa18.97■□□□□ 0.63
ACTN4-202ENST00000390009 ITGA7Q13683 1181 aa18.97■□□□□ 0.63
ACTN4-202ENST00000390009 LPIN1Q14693 890 aa18.97■□□□□ 0.63
ACTN4-202ENST00000390009 ANKRD20A8PQ5CZ79 823 aa18.97■□□□□ 0.63
ACTN4-202ENST00000390009 TNFAIP8L3Q5GJ75 292 aa18.97■□□□□ 0.63
ACTN4-202ENST00000390009 EFHC1Q5JVL4 640 aa18.97■□□□□ 0.63
ACTN4-202ENST00000390009 ERMARDQ5T6L9 678 aa18.97■□□□□ 0.63
ACTN4-202ENST00000390009 FOXR1Q6PIV2 292 aa18.97■□□□□ 0.63
ACTN4-202ENST00000390009 PCGF5Q86SE9 256 aa18.97■□□□□ 0.63
ACTN4-202ENST00000390009 VSIG1Q86XK7 387 aa18.97■□□□□ 0.63
ACTN4-202ENST00000390009 RNF169Q8NCN4 708 aa18.97■□□□□ 0.63
ACTN4-202ENST00000390009 PRCCQ92733 491 aaPredicted RBP18.97■□□□□ 0.63
ACTN4-202ENST00000390009 PAAF1Q9BRP4 392 aa18.97■□□□□ 0.63
ACTN4-202ENST00000390009 STMN4Q9H169 189 aaPredicted RBP18.97■□□□□ 0.63
ACTN4-202ENST00000390009 RABEP2Q9H5N1 569 aa18.97■□□□□ 0.63
ACTN4-202ENST00000390009 SAYSD1Q9NPB0 183 aa18.97■□□□□ 0.63
ACTN4-202ENST00000390009 CRTAC1Q9NQ79 661 aa18.97■□□□□ 0.63
ACTN4-202ENST00000390009 TRMT13Q9NUP7 481 aaKnown RBP18.97■□□□□ 0.63
ACTN4-202ENST00000390009 TMEM51Q9NW97 253 aa18.97■□□□□ 0.63
ACTN4-202ENST00000390009 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP18.97■□□□□ 0.63
ACTN4-202ENST00000390009 NOD1Q9Y239 953 aa18.97■□□□□ 0.63
ACTN4-202ENST00000390009 FARP1Q9Y4F1 1045 aaPredicted RBP18.97■□□□□ 0.63
ACTN4-202ENST00000390009 TIMM13Q9Y5L4 95 aaPredicted RBP18.97■□□□□ 0.63
ACTN4-202ENST00000390009 GTF3C5Q9Y5Q8 519 aaPredicted RBP18.97■□□□□ 0.63
ACTN4-202ENST00000390009 RPL22P35268 128 aaKnown RBP18.97■□□□□ 0.63
ACTN4-202ENST00000390009 LHX1P48742 406 aa18.97■□□□□ 0.63
ACTN4-202ENST00000390009 CTCFP49711 727 aaPredicted RBP18.97■□□□□ 0.63
ACTN4-202ENST00000390009 CDR1P51861 262 aa18.97■□□□□ 0.63
ACTN4-202ENST00000390009 ATXN1P54253 815 aaKnown RBP18.97■□□□□ 0.63
ACTN4-202ENST00000390009 PTK7Q13308 1070 aa18.97■□□□□ 0.63
ACTN4-202ENST00000390009 DSTYKQ6XUX3 929 aa18.97■□□□□ 0.63
ACTN4-202ENST00000390009 CLEC20AQ6ZU45 233 aa18.97■□□□□ 0.63
ACTN4-202ENST00000390009 ZC3H18Q86VM9 953 aaKnown RBP18.97■□□□□ 0.63
ACTN4-202ENST00000390009 FAM71DQ8N9W8 422 aa18.97■□□□□ 0.63
ACTN4-202ENST00000390009 SERPINB12Q96P63 405 aa18.97■□□□□ 0.63
ACTN4-202ENST00000390009 ZNF670Q9BS34 389 aa18.97■□□□□ 0.63
ACTN4-202ENST00000390009 MED10Q9BTT4 135 aa18.97■□□□□ 0.63
ACTN4-202ENST00000390009 IBSPP21815 317 aaPredicted RBP18.96■□□□□ 0.63
ACTN4-202ENST00000390009 RPL9P32969 192 aaKnown RBP18.96■□□□□ 0.63
ACTN4-202ENST00000390009 ROR1Q01973 937 aa18.96■□□□□ 0.63
ACTN4-202ENST00000390009 ADCY1Q08828 1119 aa18.96■□□□□ 0.63
ACTN4-202ENST00000390009 DSC3Q14574 896 aa18.96■□□□□ 0.63
ACTN4-202ENST00000390009 UPP1Q16831 310 aa18.96■□□□□ 0.63
ACTN4-202ENST00000390009 PPP6R3Q5H9R7 873 aaPredicted RBP18.96■□□□□ 0.63
ACTN4-202ENST00000390009 C1orf228Q6PIY5 440 aa18.96■□□□□ 0.63
ACTN4-202ENST00000390009 PQLC3Q8N755 202 aa18.96■□□□□ 0.63
ACTN4-202ENST00000390009 PLD5Q8N7P1 536 aa18.96■□□□□ 0.63
ACTN4-202ENST00000390009 PCDH19Q8TAB3 1148 aa18.96■□□□□ 0.63
ACTN4-202ENST00000390009 NDRG1Q92597 394 aaKnown RBP18.96■□□□□ 0.63
ACTN4-202ENST00000390009 SYT15Q9BQS2 421 aa18.96■□□□□ 0.63
ACTN4-202ENST00000390009 CNOT10Q9H9A5 744 aaKnown RBP18.96■□□□□ 0.63
ACTN4-202ENST00000390009 CWC15Q9P013 229 aaKnown RBP18.96■□□□□ 0.63
ACTN4-202ENST00000390009 SRRDQ9UH36 339 aa18.96■□□□□ 0.63
ACTN4-202ENST00000390009 DDX20Q9UHI6 824 aaKnown RBP18.96■□□□□ 0.63
ACTN4-202ENST00000390009 TSC2P49815 1807 aa18.96■□□□□ 0.62
ACTN4-202ENST00000390009 A0A0U1RQF3 1178 aa18.95■□□□□ 0.62
ACTN4-202ENST00000390009 APOL1O14791 398 aa18.95■□□□□ 0.62
ACTN4-202ENST00000390009 TGM2P21980 687 aa18.95■□□□□ 0.62
ACTN4-202ENST00000390009 MATKP42679 507 aa18.95■□□□□ 0.62
ACTN4-202ENST00000390009 SLC9A4Q6AI14 798 aa18.95■□□□□ 0.62
ACTN4-202ENST00000390009 DARS2Q6PI48 645 aaKnown RBP18.95■□□□□ 0.62
ACTN4-202ENST00000390009 RNF180Q86T96 592 aa18.95■□□□□ 0.62
ACTN4-202ENST00000390009 PPIL6Q8IXY8 311 aa18.95■□□□□ 0.62
ACTN4-202ENST00000390009 KCTD13Q8WZ19 329 aa18.95■□□□□ 0.62
ACTN4-202ENST00000390009 CPT1BQ92523 772 aa18.95■□□□□ 0.62
ACTN4-202ENST00000390009 FAM149B1Q96BN6 582 aa18.95■□□□□ 0.62
ACTN4-202ENST00000390009 ADAM2Q99965 735 aa18.95■□□□□ 0.62
ACTN4-202ENST00000390009 EPN3Q9H201 632 aa18.95■□□□□ 0.62
ACTN4-202ENST00000390009 KRT82Q9NSB4 513 aa18.95■□□□□ 0.62
ACTN4-202ENST00000390009 FAM200BP0CF97 657 aa18.95■□□□□ 0.62
ACTN4-202ENST00000390009 STIP1P31948 543 aaKnown RBP18.95■□□□□ 0.62
ACTN4-202ENST00000390009 MRPS5P82675 430 aaKnown RBP18.95■□□□□ 0.62
ACTN4-202ENST00000390009 DPYSL2Q16555 572 aa18.95■□□□□ 0.62
ACTN4-202ENST00000390009 TRIM71Q2Q1W2 868 aaKnown RBP18.95■□□□□ 0.62
ACTN4-202ENST00000390009 MAP3K21Q5TCX8 1036 aa18.95■□□□□ 0.62
ACTN4-202ENST00000390009 B4GALNT4Q76KP1 1039 aa18.95■□□□□ 0.62
ACTN4-202ENST00000390009 STRADAQ7RTN6 431 aa18.95■□□□□ 0.62
ACTN4-202ENST00000390009 DEFB106AQ8N104 65 aa18.95■□□□□ 0.62
ACTN4-202ENST00000390009 FAF2Q96CS3 445 aa18.95■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms