RNA–Protein interactions for RNA: ENST00000389980.7

SPTBN1-203, Transcript of spectrin beta, non-erythrocytic 1, humanhuman

TSL 1 (best)

Gene SPTBN1, Length 2,164 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTBN1-203ENST00000389980 GPATCH2LQ9NWQ4 482 aa12.76□□□□□ -0.37
SPTBN1-203ENST00000389980 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP12.76□□□□□ -0.371e-23■□□□□ 9.5
SPTBN1-203ENST00000389980 SYNJ2BP-COX16A0A087WUM0 186 aa12.75□□□□□ -0.37
SPTBN1-203ENST00000389980 C3orf70A6NLC5 250 aaPredicted RBP12.75□□□□□ -0.37
SPTBN1-203ENST00000389980 HSF2BPO75031 334 aa12.75□□□□□ -0.37
SPTBN1-203ENST00000389980 PHF2O75151 1096 aa12.75□□□□□ -0.37
SPTBN1-203ENST00000389980 KRT7P08729 469 aa12.75□□□□□ -0.37
SPTBN1-203ENST00000389980 PCK1P35558 622 aa12.75□□□□□ -0.37
SPTBN1-203ENST00000389980 GPR15P49685 360 aa12.75□□□□□ -0.37
SPTBN1-203ENST00000389980 DAOAP59103 153 aa12.75□□□□□ -0.37
SPTBN1-203ENST00000389980 YWHAZP63104 245 aaKnown RBP12.75□□□□□ -0.37
SPTBN1-203ENST00000389980 KLF1Q13351 362 aaPredicted RBP12.75□□□□□ -0.37
SPTBN1-203ENST00000389980 MRPL58Q14197 206 aaKnown RBP12.75□□□□□ -0.37
SPTBN1-203ENST00000389980 ACAP1Q15027 740 aa12.75□□□□□ -0.37
SPTBN1-203ENST00000389980 MAPRE1Q15691 268 aaKnown RBP12.75□□□□□ -0.37
SPTBN1-203ENST00000389980 GLE1Q53GS7 698 aaKnown RBP12.75□□□□□ -0.37
SPTBN1-203ENST00000389980 SPOUT1Q5T280 376 aaKnown RBP12.75□□□□□ -0.37
SPTBN1-203ENST00000389980 FAM43BQ6ZT52 329 aaPredicted RBP12.75□□□□□ -0.37
SPTBN1-203ENST00000389980 C16orf59Q7L2K0 433 aa12.75□□□□□ -0.37
SPTBN1-203ENST00000389980 POLNQ7Z5Q5 900 aa12.75□□□□□ -0.37
SPTBN1-203ENST00000389980 SCN4BQ8IWT1 228 aa12.75□□□□□ -0.37
SPTBN1-203ENST00000389980 TMEM199Q8N511 208 aa12.75□□□□□ -0.37
SPTBN1-203ENST00000389980 RBM41Q96IZ5 413 aaKnown RBP12.75□□□□□ -0.37
SPTBN1-203ENST00000389980 TRIM51Q9BSJ1 452 aa12.75□□□□□ -0.37
SPTBN1-203ENST00000389980 VN1R3Q9BXE9 311 aa12.75□□□□□ -0.37
SPTBN1-203ENST00000389980 CHST7Q9NS84 486 aa12.75□□□□□ -0.37
SPTBN1-203ENST00000389980 DDX56Q9NY93 547 aaKnown RBP12.75□□□□□ -0.37
SPTBN1-203ENST00000389980 COX16Q9P0S2 106 aa12.75□□□□□ -0.37
SPTBN1-203ENST00000389980 MTUS1Q9ULD2 1270 aa12.75□□□□□ -0.37
SPTBN1-203ENST00000389980 NAALADL1Q9UQQ1 740 aa12.75□□□□□ -0.37
SPTBN1-203ENST00000389980 LAMA3Q16787 3333 aa12.75□□□□□ -0.37
SPTBN1-203ENST00000389980 CHD7Q9P2D1 2997 aa12.75□□□□□ -0.37
SPTBN1-203ENST00000389980 PRPSAP2O60256 369 aa12.74□□□□□ -0.37
SPTBN1-203ENST00000389980 ZBED1O96006 694 aa12.74□□□□□ -0.37
SPTBN1-203ENST00000389980 AMHP03971 560 aa12.74□□□□□ -0.37
SPTBN1-203ENST00000389980 FYNP06241 537 aa12.74□□□□□ -0.37
SPTBN1-203ENST00000389980 SCNN1AP37088 669 aa12.74□□□□□ -0.37
SPTBN1-203ENST00000389980 MATKP42679 507 aa12.74□□□□□ -0.37
SPTBN1-203ENST00000389980 CDKN2BP42772 138 aa12.74□□□□□ -0.37
SPTBN1-203ENST00000389980 CLUL1Q15846 466 aa12.74□□□□□ -0.37
SPTBN1-203ENST00000389980 CCDC137Q6PK04 289 aaKnown RBP12.74□□□□□ -0.37
SPTBN1-203ENST00000389980 C4orf50Q6ZRC1 276 aa12.74□□□□□ -0.37
SPTBN1-203ENST00000389980 ATAD1Q8NBU5 361 aa12.74□□□□□ -0.37
SPTBN1-203ENST00000389980 KCTD6Q8NC69 237 aa12.74□□□□□ -0.37
SPTBN1-203ENST00000389980 GDAP1L1Q96MZ0 367 aa12.74□□□□□ -0.37
SPTBN1-203ENST00000389980 C11orf84Q9BUA3 381 aaPredicted RBP12.74□□□□□ -0.37
SPTBN1-203ENST00000389980 DDX23Q9BUQ8 820 aaKnown RBP12.74□□□□□ -0.37
SPTBN1-203ENST00000389980 FUT8Q9BYC5 575 aa12.74□□□□□ -0.37
SPTBN1-203ENST00000389980 STAU2Q9NUL3 570 aaKnown RBP eCLIP12.74□□□□□ -0.37
SPTBN1-203ENST00000389980 PATJQ8NI35 1801 aa12.74□□□□□ -0.37
SPTBN1-203ENST00000389980 hCG_1818297A0A087WSY0 165 aa12.74□□□□□ -0.37
SPTBN1-203ENST00000389980 SOAT2O75908 522 aa12.74□□□□□ -0.37
SPTBN1-203ENST00000389980 KDELR1P24390 212 aa12.74□□□□□ -0.37
SPTBN1-203ENST00000389980 PTPN9P43378 593 aa12.74□□□□□ -0.37
SPTBN1-203ENST00000389980 CARSP49589 748 aaKnown RBP12.74□□□□□ -0.37
SPTBN1-203ENST00000389980 SULT1E1P49888 294 aa12.74□□□□□ -0.37
SPTBN1-203ENST00000389980 DYNLT1P63172 113 aa12.74□□□□□ -0.37
SPTBN1-203ENST00000389980 DR1Q01658 176 aa12.74□□□□□ -0.37
SPTBN1-203ENST00000389980 MMRN1Q13201 1228 aa12.74□□□□□ -0.37
SPTBN1-203ENST00000389980 CA9Q16790 459 aa12.74□□□□□ -0.37
SPTBN1-203ENST00000389980 DDR2Q16832 855 aa12.74□□□□□ -0.37
SPTBN1-203ENST00000389980 ZC3H12AQ5D1E8 599 aaKnown RBP12.74□□□□□ -0.37
SPTBN1-203ENST00000389980 TFDP3Q5H9I0 405 aa12.74□□□□□ -0.37
SPTBN1-203ENST00000389980 BEND6Q5SZJ8 279 aaPredicted RBP12.74□□□□□ -0.37
SPTBN1-203ENST00000389980 ZNF280DQ6N043 979 aa12.74□□□□□ -0.37
SPTBN1-203ENST00000389980 CCNI2Q6ZMN8 369 aaPredicted RBP12.74□□□□□ -0.37
SPTBN1-203ENST00000389980 BHLHA9Q7RTU4 235 aa12.74□□□□□ -0.37
SPTBN1-203ENST00000389980 UBE2Q1Q7Z7E8 422 aa12.74□□□□□ -0.37
SPTBN1-203ENST00000389980 DDX42Q86XP3 938 aaKnown RBP eCLIP12.74□□□□□ -0.37
SPTBN1-203ENST00000389980 DCP1BQ8IZD4 617 aaKnown RBP12.74□□□□□ -0.37
SPTBN1-203ENST00000389980 ADAM32Q8TC27 787 aa12.74□□□□□ -0.37
SPTBN1-203ENST00000389980 CASKIN2Q8WXE0 1202 aa12.74□□□□□ -0.37
SPTBN1-203ENST00000389980 IFT81Q8WYA0 676 aa12.74□□□□□ -0.37
SPTBN1-203ENST00000389980 EDEM1Q92611 657 aa12.74□□□□□ -0.37
SPTBN1-203ENST00000389980 HAUS1Q96CS2 278 aa12.74□□□□□ -0.37
SPTBN1-203ENST00000389980 ZNF689Q96CS4 500 aaPredicted RBP12.74□□□□□ -0.37
SPTBN1-203ENST00000389980 TRIM31Q9BZY9 425 aa12.74□□□□□ -0.37
SPTBN1-203ENST00000389980 SLITRK6Q9H5Y7 841 aa12.74□□□□□ -0.37
SPTBN1-203ENST00000389980 CNGB3Q9NQW8 809 aa12.74□□□□□ -0.37
SPTBN1-203ENST00000389980 ZNF638Q14966 1978 aaKnown RBP12.74□□□□□ -0.37
SPTBN1-203ENST00000389980 ZBBXA8MT70 800 aa12.73□□□□□ -0.37
SPTBN1-203ENST00000389980 C2CD2LO14523 706 aa12.73□□□□□ -0.37
SPTBN1-203ENST00000389980 DAB1O75553 588 aa12.73□□□□□ -0.37
SPTBN1-203ENST00000389980 CPB1P15086 417 aa12.73□□□□□ -0.37
SPTBN1-203ENST00000389980 RPL17P18621 184 aaKnown RBP12.73□□□□□ -0.37
SPTBN1-203ENST00000389980 COILP38432 576 aaPredicted RBP12.73□□□□□ -0.37
SPTBN1-203ENST00000389980 CYP1B1Q16678 543 aa12.73□□□□□ -0.37
SPTBN1-203ENST00000389980 OTUD1Q5VV17 481 aaPredicted RBP12.73□□□□□ -0.37
SPTBN1-203ENST00000389980 KCNT2Q6UVM3 1135 aa12.73□□□□□ -0.37
SPTBN1-203ENST00000389980 ARCQ7LC44 396 aa12.73□□□□□ -0.37
SPTBN1-203ENST00000389980 CMASQ8NFW8 434 aaPredicted RBP12.73□□□□□ -0.37
SPTBN1-203ENST00000389980 CCDC26Q8TAB7 109 aa12.73□□□□□ -0.37
SPTBN1-203ENST00000389980 GPR152Q8TDT2 470 aa12.73□□□□□ -0.37
SPTBN1-203ENST00000389980 CENPIQ92674 756 aaPredicted RBP12.73□□□□□ -0.37
SPTBN1-203ENST00000389980 BADQ92934 168 aa12.73□□□□□ -0.37
SPTBN1-203ENST00000389980 IGSF21Q96ID5 467 aa12.73□□□□□ -0.37
SPTBN1-203ENST00000389980 TTPALQ9BTX7 342 aa12.73□□□□□ -0.37
SPTBN1-203ENST00000389980 CALN1Q9BXU9 219 aa12.73□□□□□ -0.37
SPTBN1-203ENST00000389980 UBXN6Q9BZV1 441 aa12.73□□□□□ -0.37
SPTBN1-203ENST00000389980 RC3H2Q9HBD1 1191 aaKnown RBP12.73□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms