RNA–Protein interactions for RNA: ENST00000389547.7

PPFIA1-202, Transcript of PTPRF interacting protein alpha 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene PPFIA1, Length 4,133 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPFIA1-202ENST00000389547 PEX11AO75192 247 aa19.59■□□□□ 0.73
PPFIA1-202ENST00000389547 NOL4O94818 638 aa19.59■□□□□ 0.73
PPFIA1-202ENST00000389547 THAP11Q96EK4 314 aa19.59■□□□□ 0.73
PPFIA1-202ENST00000389547 TSNARE1Q96NA8 513 aa19.59■□□□□ 0.73
PPFIA1-202ENST00000389547 MTO1Q9Y2Z2 717 aaKnown RBP19.59■□□□□ 0.73
PPFIA1-202ENST00000389547 RRM1P23921 792 aa19.59■□□□□ 0.73
PPFIA1-202ENST00000389547 HOXD13P35453 343 aa19.59■□□□□ 0.73
PPFIA1-202ENST00000389547 ATXN3P54252 364 aaPredicted RBP19.59■□□□□ 0.73
PPFIA1-202ENST00000389547 FSCN1Q16658 493 aaKnown RBP19.59■□□□□ 0.73
PPFIA1-202ENST00000389547 ATG16L1Q676U5 607 aa19.59■□□□□ 0.73
PPFIA1-202ENST00000389547 SPOCK2Q92563 424 aa19.59■□□□□ 0.73
PPFIA1-202ENST00000389547 CNBD2Q96M20 576 aa19.59■□□□□ 0.73
PPFIA1-202ENST00000389547 CISHQ9NSE2 258 aa19.59■□□□□ 0.73
PPFIA1-202ENST00000389547 TMCO1Q9UM00 188 aa19.59■□□□□ 0.73
PPFIA1-202ENST00000389547 MAD1L1Q9Y6D9 718 aa19.59■□□□□ 0.73
PPFIA1-202ENST00000389547 LAMB2P55268 1798 aa19.59■□□□□ 0.73
PPFIA1-202ENST00000389547 IQANK1A0A1B0GTG1 560 aa19.58■□□□□ 0.73
PPFIA1-202ENST00000389547 SFSWAPQ12872 951 aaKnown RBP19.58■□□□□ 0.73
PPFIA1-202ENST00000389547 MFSD10Q14728 455 aa19.58■□□□□ 0.73
PPFIA1-202ENST00000389547 DNAL1Q4LDG9 190 aa19.58■□□□□ 0.73
PPFIA1-202ENST00000389547 ZPBP2Q6X784 338 aa19.58■□□□□ 0.73
PPFIA1-202ENST00000389547 PRPF39Q86UA1 669 aaKnown RBP19.58■□□□□ 0.73
PPFIA1-202ENST00000389547 SIX6OS1Q8N1H7 587 aa19.58■□□□□ 0.73
PPFIA1-202ENST00000389547 GFM2Q969S9 779 aaKnown RBP19.58■□□□□ 0.73
PPFIA1-202ENST00000389547 MCEEQ96PE7 176 aa19.58■□□□□ 0.73
PPFIA1-202ENST00000389547 DHX33Q9H6R0 707 aaKnown RBP19.58■□□□□ 0.73
PPFIA1-202ENST00000389547 NEU2Q9Y3R4 380 aa19.58■□□□□ 0.73
PPFIA1-202ENST00000389547 MYH8P13535 1937 aa19.58■□□□□ 0.73
PPFIA1-202ENST00000389547 SBF2Q86WG5 1849 aa19.58■□□□□ 0.73
PPFIA1-202ENST00000389547 PRPSAP2O60256 369 aa19.58■□□□□ 0.73
PPFIA1-202ENST00000389547 CALB1P05937 261 aa19.58■□□□□ 0.73
PPFIA1-202ENST00000389547 GALK1P51570 392 aa19.58■□□□□ 0.73
PPFIA1-202ENST00000389547 PPIDQ08752 370 aaKnown RBP19.58■□□□□ 0.73
PPFIA1-202ENST00000389547 LIN52Q52LA3 116 aa19.58■□□□□ 0.73
PPFIA1-202ENST00000389547 LRRC6Q86X45 466 aa19.58■□□□□ 0.73
PPFIA1-202ENST00000389547 SLC9A9Q8IVB4 645 aa19.58■□□□□ 0.73
PPFIA1-202ENST00000389547 SHCBP1Q8NEM2 672 aa19.58■□□□□ 0.73
PPFIA1-202ENST00000389547 SEMA4DQ92854 862 aa19.58■□□□□ 0.73
PPFIA1-202ENST00000389547 ACSF2Q96CM8 615 aaPredicted RBP19.58■□□□□ 0.73
PPFIA1-202ENST00000389547 GLT1D1Q96MS3 346 aa19.58■□□□□ 0.73
PPFIA1-202ENST00000389547 DPP3Q9NY33 737 aa19.58■□□□□ 0.73
PPFIA1-202ENST00000389547 ZNF212Q9UDV6 495 aa19.58■□□□□ 0.73
PPFIA1-202ENST00000389547 KCNH4Q9UQ05 1017 aa19.58■□□□□ 0.73
PPFIA1-202ENST00000389547 MAFBQ9Y5Q3 323 aaPredicted RBP19.58■□□□□ 0.73
PPFIA1-202ENST00000389547 STK10O94804 968 aaKnown RBP19.58■□□□□ 0.72
PPFIA1-202ENST00000389547 VAV1P15498 845 aa19.58■□□□□ 0.72
PPFIA1-202ENST00000389547 PPP2R5DQ14738 602 aa19.58■□□□□ 0.72
PPFIA1-202ENST00000389547 NOP9Q86U38 636 aaKnown RBP19.58■□□□□ 0.72
PPFIA1-202ENST00000389547 WDR75Q8IWA0 830 aaKnown RBP19.58■□□□□ 0.72
PPFIA1-202ENST00000389547 PDIK1LQ8N165 341 aa19.58■□□□□ 0.72
PPFIA1-202ENST00000389547 R3HDMLQ9H3Y0 253 aa19.58■□□□□ 0.72
PPFIA1-202ENST00000389547 SLC15A5A6NIM6 579 aa19.57■□□□□ 0.72
PPFIA1-202ENST00000389547 IL18RAPO95256 599 aa19.57■□□□□ 0.72
PPFIA1-202ENST00000389547 LYNP07948 512 aa19.57■□□□□ 0.72
PPFIA1-202ENST00000389547 MYL2P10916 166 aa19.57■□□□□ 0.72
PPFIA1-202ENST00000389547 SPDYCQ5MJ68 293 aa19.57■□□□□ 0.72
PPFIA1-202ENST00000389547 TMEM63BQ5T3F8 832 aa19.57■□□□□ 0.72
PPFIA1-202ENST00000389547 KRT35Q92764 455 aa19.57■□□□□ 0.72
PPFIA1-202ENST00000389547 SGIP1Q9BQI5 828 aa19.57■□□□□ 0.72
PPFIA1-202ENST00000389547 ERVK-5Q9HDB9 667 aa19.57■□□□□ 0.72
PPFIA1-202ENST00000389547 APOBEC2Q9Y235 224 aaKnown RBP19.57■□□□□ 0.72
PPFIA1-202ENST00000389547 KRT3P12035 628 aa19.57■□□□□ 0.72
PPFIA1-202ENST00000389547 ICAM3P32942 547 aa19.57■□□□□ 0.72
PPFIA1-202ENST00000389547 PLPPR4Q7Z2D5 763 aa19.57■□□□□ 0.72
PPFIA1-202ENST00000389547 METTL23Q86XA0 190 aa19.57■□□□□ 0.72
PPFIA1-202ENST00000389547 MAML3Q96JK9 1138 aa19.57■□□□□ 0.72
PPFIA1-202ENST00000389547 WWP1Q9H0M0 922 aa19.57■□□□□ 0.72
PPFIA1-202ENST00000389547 LOC100653049A0A140TA62 436 aa19.57■□□□□ 0.72
PPFIA1-202ENST00000389547 A6NJR5 290 aa19.57■□□□□ 0.72
PPFIA1-202ENST00000389547 KRT34O76011 436 aa19.57■□□□□ 0.72
PPFIA1-202ENST00000389547 FLT3LGP49771 235 aa19.57■□□□□ 0.72
PPFIA1-202ENST00000389547 SERPINB8P50452 374 aa19.57■□□□□ 0.72
PPFIA1-202ENST00000389547 ANKRD23Q86SG2 305 aa19.57■□□□□ 0.72
PPFIA1-202ENST00000389547 ARID3BQ8IVW6 561 aaPredicted RBP19.57■□□□□ 0.72
PPFIA1-202ENST00000389547 LZICQ8WZA0 190 aa19.57■□□□□ 0.72
PPFIA1-202ENST00000389547 UBE2OQ9C0C9 1292 aaKnown RBP19.57■□□□□ 0.72
PPFIA1-202ENST00000389547 APPL1Q9UKG1 709 aa19.57■□□□□ 0.72
PPFIA1-202ENST00000389547 POLIQ9UNA4 740 aa19.57■□□□□ 0.72
PPFIA1-202ENST00000389547 LACTBL1A8MY62 500 aa19.57■□□□□ 0.72
PPFIA1-202ENST00000389547 GIPC1O14908 333 aa19.57■□□□□ 0.72
PPFIA1-202ENST00000389547 AKR1A1P14550 325 aa19.57■□□□□ 0.72
PPFIA1-202ENST00000389547 ARSEP51690 589 aa19.57■□□□□ 0.72
PPFIA1-202ENST00000389547 BRSK2Q8IWQ3 736 aa19.57■□□□□ 0.72
PPFIA1-202ENST00000389547 ZFAND2BQ8WV99 257 aa19.57■□□□□ 0.72
PPFIA1-202ENST00000389547 ATP2A3Q93084 1043 aa19.57■□□□□ 0.72
PPFIA1-202ENST00000389547 PWWP2AQ96N64 755 aa19.57■□□□□ 0.72
PPFIA1-202ENST00000389547 LCP1P13796 627 aa19.56■□□□□ 0.72
PPFIA1-202ENST00000389547 ANXA13P27216 316 aa19.56■□□□□ 0.72
PPFIA1-202ENST00000389547 ADSSP30520 456 aa19.56■□□□□ 0.72
PPFIA1-202ENST00000389547 ANKRD20A4Q4UJ75 823 aa19.56■□□□□ 0.72
PPFIA1-202ENST00000389547 DHX30Q7L2E3 1194 aaKnown RBP eCLIP19.56■□□□□ 0.72
PPFIA1-202ENST00000389547 TBC1D23Q9NUY8 699 aa19.56■□□□□ 0.72
PPFIA1-202ENST00000389547 ADGRA3Q8IWK6 1321 aa19.56■□□□□ 0.72
PPFIA1-202ENST00000389547 DOCK2Q92608 1830 aa19.56■□□□□ 0.72
PPFIA1-202ENST00000389547 LCA5LO95447 670 aa19.56■□□□□ 0.72
PPFIA1-202ENST00000389547 PSEN2P49810 448 aa19.56■□□□□ 0.72
PPFIA1-202ENST00000389547 PSMD7P51665 324 aa19.56■□□□□ 0.72
PPFIA1-202ENST00000389547 CCL14Q16627 93 aa19.56■□□□□ 0.72
PPFIA1-202ENST00000389547 CNPY1Q3B7I2 92 aa19.56■□□□□ 0.72
PPFIA1-202ENST00000389547 EMC10Q5UCC4 262 aa19.56■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms