RNA–Protein interactions for RNA: ENST00000389301.7

FANCA-202, Transcript of FA complementation group A, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene FANCA, Length 5,451 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FANCA-202ENST00000389301 SAR1AQ9NR31 198 aa12.9□□□□□ -0.34
FANCA-202ENST00000389301 TUBGCP4Q9UGJ1 667 aa12.9□□□□□ -0.34
FANCA-202ENST00000389301 CLCA2Q9UQC9 943 aa12.9□□□□□ -0.34
FANCA-202ENST00000389301 CES2O00748 559 aa12.9□□□□□ -0.34
FANCA-202ENST00000389301 BAIAP3O94812 1187 aa12.9□□□□□ -0.34
FANCA-202ENST00000389301 MFN2O95140 757 aa12.9□□□□□ -0.34
FANCA-202ENST00000389301 HMGCS2P54868 508 aa12.9□□□□□ -0.34
FANCA-202ENST00000389301 PDK2Q15119 407 aa12.9□□□□□ -0.34
FANCA-202ENST00000389301 SEZ6Q53EL9 994 aa12.9□□□□□ -0.34
FANCA-202ENST00000389301 DALRD3Q5D0E6 543 aaKnown RBP12.9□□□□□ -0.34
FANCA-202ENST00000389301 KCNV1Q6PIU1 500 aa12.9□□□□□ -0.34
FANCA-202ENST00000389301 TBC1D19Q8N5T2 526 aa12.9□□□□□ -0.34
FANCA-202ENST00000389301 RNF148Q8N7C7 305 aa12.9□□□□□ -0.34
FANCA-202ENST00000389301 GPR63Q9BZJ6 419 aa12.9□□□□□ -0.34
FANCA-202ENST00000389301 DCTN2Q13561 401 aaKnown RBP12.89□□□□□ -0.35
FANCA-202ENST00000389301 GIT2Q14161 759 aa12.89□□□□□ -0.35
FANCA-202ENST00000389301 B3GNT6Q6ZMB0 384 aa12.89□□□□□ -0.35
FANCA-202ENST00000389301 YTHDF3Q7Z739 585 aaKnown RBP12.89□□□□□ -0.35
FANCA-202ENST00000389301 LRRC39Q96DD0 335 aa12.89□□□□□ -0.35
FANCA-202ENST00000389301 KCNH7Q9NS40 1196 aa12.89□□□□□ -0.35
FANCA-202ENST00000389301 ATAD3AQ9NVI7 634 aa12.89□□□□□ -0.35
FANCA-202ENST00000389301 NPHP4O75161 1426 aaPredicted RBP12.89□□□□□ -0.35
FANCA-202ENST00000389301 DPYSL4O14531 572 aa12.89□□□□□ -0.35
FANCA-202ENST00000389301 MT-CO1P00395 513 aa12.89□□□□□ -0.35
FANCA-202ENST00000389301 MYCP01106 439 aaPredicted RBP12.89□□□□□ -0.35
FANCA-202ENST00000389301 CD4P01730 458 aa12.89□□□□□ -0.35
FANCA-202ENST00000389301 MLNP12872 115 aa12.89□□□□□ -0.35
FANCA-202ENST00000389301 RAD23AP54725 363 aa12.89□□□□□ -0.35
FANCA-202ENST00000389301 OTUD3Q5T2D3 398 aaPredicted RBP12.89□□□□□ -0.35
FANCA-202ENST00000389301 DHFR2Q86XF0 187 aa12.89□□□□□ -0.35
FANCA-202ENST00000389301 LRRC71Q8N4P6 559 aa12.89□□□□□ -0.35
FANCA-202ENST00000389301 ATG16L2Q8NAA4 619 aa12.89□□□□□ -0.35
FANCA-202ENST00000389301 SERBP1Q8NC51 408 aaKnown RBP eCLIP12.89□□□□□ -0.35
FANCA-202ENST00000389301 NCKIPSDQ9NZQ3 722 aa12.89□□□□□ -0.35
FANCA-202ENST00000389301 M0QYT0 321 aa12.89□□□□□ -0.35
FANCA-202ENST00000389301 OPLAHO14841 1288 aa12.89□□□□□ -0.35
FANCA-202ENST00000389301 SERPINE1P05121 402 aa12.89□□□□□ -0.35
FANCA-202ENST00000389301 CSF1RP07333 972 aa12.89□□□□□ -0.35
FANCA-202ENST00000389301 MZF1P28698 734 aaPredicted RBP12.89□□□□□ -0.35
FANCA-202ENST00000389301 HPCAP84074 193 aa12.89□□□□□ -0.35
FANCA-202ENST00000389301 ALDH6A1Q02252 535 aaKnown RBP12.89□□□□□ -0.35
FANCA-202ENST00000389301 SLC20A2Q08357 652 aa12.89□□□□□ -0.35
FANCA-202ENST00000389301 VAC14Q08AM6 782 aa12.89□□□□□ -0.35
FANCA-202ENST00000389301 XRCC4Q13426 336 aa12.89□□□□□ -0.35
FANCA-202ENST00000389301 ITGA9Q13797 1035 aa12.89□□□□□ -0.35
FANCA-202ENST00000389301 ZSWIM2Q8NEG5 633 aa12.89□□□□□ -0.35
FANCA-202ENST00000389301 BLOC1S5Q8TDH9 187 aa12.89□□□□□ -0.35
FANCA-202ENST00000389301 PYDC1Q8WXC3 89 aa12.89□□□□□ -0.35
FANCA-202ENST00000389301 SEPT1Q8WYJ6 367 aa12.89□□□□□ -0.35
FANCA-202ENST00000389301 APBB2Q92870 758 aa12.89□□□□□ -0.35
FANCA-202ENST00000389301 MMADHCQ9H3L0 296 aaPredicted RBP12.89□□□□□ -0.35
FANCA-202ENST00000389301 PCDH9Q9HC56 1237 aa12.89□□□□□ -0.35
FANCA-202ENST00000389301 DYRK4Q9NR20 520 aa12.89□□□□□ -0.35
FANCA-202ENST00000389301 ANKEF1Q9NU02 776 aa12.89□□□□□ -0.35
FANCA-202ENST00000389301 AKAP3O75969 853 aa12.89□□□□□ -0.35
FANCA-202ENST00000389301 RRM2P31350 389 aa12.89□□□□□ -0.35
FANCA-202ENST00000389301 CCT8P50990 548 aa12.89□□□□□ -0.35
FANCA-202ENST00000389301 NCKAP1LP55160 1127 aa12.89□□□□□ -0.35
FANCA-202ENST00000389301 VEPH1Q14D04 833 aa12.89□□□□□ -0.35
FANCA-202ENST00000389301 TRIM71Q2Q1W2 868 aaKnown RBP12.89□□□□□ -0.35
FANCA-202ENST00000389301 SV2CQ496J9 727 aa12.89□□□□□ -0.35
FANCA-202ENST00000389301 PPP1R10Q96QC0 940 aaKnown RBP12.89□□□□□ -0.35
FANCA-202ENST00000389301 CBWD1Q9BRT8 395 aa12.89□□□□□ -0.35
FANCA-202ENST00000389301 TRIM8Q9BZR9 551 aa12.89□□□□□ -0.35
FANCA-202ENST00000389301 CEP44Q9C0F1 390 aa12.89□□□□□ -0.35
FANCA-202ENST00000389301 TRPC7Q9HCX4 862 aa12.89□□□□□ -0.35
FANCA-202ENST00000389301 KRT84Q9NSB2 600 aa12.89□□□□□ -0.35
FANCA-202ENST00000389301 MAP3K20Q9NYL2 800 aaKnown RBP12.89□□□□□ -0.35
FANCA-202ENST00000389301 C4BPBP20851 252 aa12.89□□□□□ -0.35
FANCA-202ENST00000389301 CSHL1Q14406 222 aa12.89□□□□□ -0.35
FANCA-202ENST00000389301 NCF4Q15080 339 aa12.89□□□□□ -0.35
FANCA-202ENST00000389301 PGS1Q32NB8 556 aa12.89□□□□□ -0.35
FANCA-202ENST00000389301 MRNIPQ6NTE8 343 aa12.89□□□□□ -0.35
FANCA-202ENST00000389301 TRIM63Q969Q1 353 aa12.89□□□□□ -0.35
FANCA-202ENST00000389301 SEMA6AQ9H2E6 1030 aa12.89□□□□□ -0.35
FANCA-202ENST00000389301 COPS7BQ9H9Q2 264 aaPredicted RBP12.89□□□□□ -0.35
FANCA-202ENST00000389301 STK39Q9UEW8 545 aa12.89□□□□□ -0.35
FANCA-202ENST00000389301 ACOT9Q9Y305 439 aa12.89□□□□□ -0.35
FANCA-202ENST00000389301 CLTCL1P53675 1640 aa12.88□□□□□ -0.35
FANCA-202ENST00000389301 ELK3P41970 407 aa12.88□□□□□ -0.35
FANCA-202ENST00000389301 HS6ST3Q8IZP7 471 aa12.88□□□□□ -0.35
FANCA-202ENST00000389301 ZSCAN18Q8TBC5 510 aaPredicted RBP12.88□□□□□ -0.35
FANCA-202ENST00000389301 TATDN2Q93075 761 aa12.88□□□□□ -0.35
FANCA-202ENST00000389301 FAM136AQ96C01 138 aa12.88□□□□□ -0.35
FANCA-202ENST00000389301 MAGED4Q96JG8 741 aa12.88□□□□□ -0.35
FANCA-202ENST00000389301 POP1Q99575 1024 aaKnown RBP12.88□□□□□ -0.35
FANCA-202ENST00000389301 APOL2Q9BQE5 337 aa12.88□□□□□ -0.35
FANCA-202ENST00000389301 NAT9Q9BTE0 207 aa12.88□□□□□ -0.35
FANCA-202ENST00000389301 UNKQ9C0B0 810 aaKnown RBP12.88□□□□□ -0.35
FANCA-202ENST00000389301 THAP1Q9NVV9 213 aa12.88□□□□□ -0.35
FANCA-202ENST00000389301 ASB14A6NK59 587 aa12.88□□□□□ -0.35
FANCA-202ENST00000389301 UGT3A1Q6NUS8 523 aa12.88□□□□□ -0.35
FANCA-202ENST00000389301 VPS33AQ96AX1 596 aa12.88□□□□□ -0.35
FANCA-202ENST00000389301 SRPK1Q96SB4 655 aaKnown RBP12.88□□□□□ -0.35
FANCA-202ENST00000389301 OSBPL10Q9BXB5 764 aa12.88□□□□□ -0.35
FANCA-202ENST00000389301 SMARCAD1Q9H4L7 1026 aa12.88□□□□□ -0.35
FANCA-202ENST00000389301 COMMD8Q9NX08 183 aa12.88□□□□□ -0.35
FANCA-202ENST00000389301 USP18Q9UMW8 372 aa12.88□□□□□ -0.35
FANCA-202ENST00000389301 SHOC2Q9UQ13 582 aa12.88□□□□□ -0.35
FANCA-202ENST00000389301 TARBP1Q13395 1621 aaKnown RBP12.88□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms