RNA–Protein interactions for RNA: ENST00000389138.7

ERCC4-202, Transcript of ERCC excision repair 4, endonuclease catalytic subunit, humanhuman

TSL 2

Gene ERCC4, Length 2,106 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC4-202ENST00000389138 GALNT4Q8N4A0 578 aa6.08□□□□□ -1.44
ERCC4-202ENST00000389138 CELF5Q8N6W0 485 aaKnown RBP6.08□□□□□ -1.44
ERCC4-202ENST00000389138 CEP295NLQ96MC4 621 aa6.08□□□□□ -1.44
ERCC4-202ENST00000389138 POP1Q99575 1024 aaKnown RBP6.08□□□□□ -1.44
ERCC4-202ENST00000389138 NT5C3AQ9H0P0 336 aa6.08□□□□□ -1.44
ERCC4-202ENST00000389138 GBP3Q9H0R5 595 aa6.08□□□□□ -1.44
ERCC4-202ENST00000389138 PRDM12Q9H4Q4 367 aa6.08□□□□□ -1.44
ERCC4-202ENST00000389138 MROH8Q9H579 483 aa6.08□□□□□ -1.44
ERCC4-202ENST00000389138 PDE11AQ9HCR9 933 aa6.08□□□□□ -1.44
ERCC4-202ENST00000389138 TBC1D14Q9P2M4 693 aa6.08□□□□□ -1.44
ERCC4-202ENST00000389138 TMEFF2Q9UIK5 374 aaPredicted RBP6.08□□□□□ -1.44
ERCC4-202ENST00000389138 A4D1N5 150 aa6.07□□□□□ -1.44
ERCC4-202ENST00000389138 IKBKBO14920 756 aa6.07□□□□□ -1.44
ERCC4-202ENST00000389138 KCNQ3O43525 872 aa6.07□□□□□ -1.44
ERCC4-202ENST00000389138 IFNB1P01574 187 aa6.07□□□□□ -1.44
ERCC4-202ENST00000389138 LRG1P02750 347 aa6.07□□□□□ -1.44
ERCC4-202ENST00000389138 ANXA1P04083 346 aa6.07□□□□□ -1.44
ERCC4-202ENST00000389138 NEFHP12036 1026 aa6.07□□□□□ -1.44
ERCC4-202ENST00000389138 TNNT1P13805 278 aa6.07□□□□□ -1.44
ERCC4-202ENST00000389138 RXRAP19793 462 aa6.07□□□□□ -1.44
ERCC4-202ENST00000389138 TNFRSF8P28908 595 aa6.07□□□□□ -1.44
ERCC4-202ENST00000389138 IL15P40933 162 aaPredicted RBP6.07□□□□□ -1.44
ERCC4-202ENST00000389138 ATP11AP98196 1134 aa6.07□□□□□ -1.44
ERCC4-202ENST00000389138 PAK1Q13153 545 aa6.07□□□□□ -1.44
ERCC4-202ENST00000389138 NFIXQ14938 502 aa6.07□□□□□ -1.44
ERCC4-202ENST00000389138 CEP135Q66GS9 1140 aa6.07□□□□□ -1.44
ERCC4-202ENST00000389138 SCARA3Q6AZY7 606 aa6.07□□□□□ -1.44
ERCC4-202ENST00000389138 CEP85Q6P2H3 762 aa6.07□□□□□ -1.44
ERCC4-202ENST00000389138 ADGRG6Q86SQ4 1221 aa6.07□□□□□ -1.44
ERCC4-202ENST00000389138 WFDC8Q8IUA0 241 aa6.07□□□□□ -1.44
ERCC4-202ENST00000389138 DTWD1Q8N5C7 304 aa6.07□□□□□ -1.44
ERCC4-202ENST00000389138 GLIS1Q8NBF1 620 aa6.07□□□□□ -1.44
ERCC4-202ENST00000389138 SUN5Q8TC36 379 aa6.07□□□□□ -1.44
ERCC4-202ENST00000389138 THAP4Q8WY91 577 aa6.07□□□□□ -1.44
ERCC4-202ENST00000389138 NEIL1Q96FI4 390 aaPredicted RBP6.07□□□□□ -1.44
ERCC4-202ENST00000389138 FUT8Q9BYC5 575 aa6.07□□□□□ -1.44
ERCC4-202ENST00000389138 REXO4Q9GZR2 422 aaKnown RBP6.07□□□□□ -1.44
ERCC4-202ENST00000389138 RASSF4Q9H2L5 321 aa6.07□□□□□ -1.44
ERCC4-202ENST00000389138 ST6GALNAC4Q9H4F1 302 aa6.07□□□□□ -1.44
ERCC4-202ENST00000389138 SYNCQ9H7C4 482 aa6.07□□□□□ -1.44
ERCC4-202ENST00000389138 INCENPQ9NQS7 918 aa6.07□□□□□ -1.44
ERCC4-202ENST00000389138 HOMER3Q9NSC5 361 aa6.07□□□□□ -1.44
ERCC4-202ENST00000389138 SESN1Q9Y6P5 492 aa6.07□□□□□ -1.44
ERCC4-202ENST00000389138 A0A0G2JPF8 293 aa6.07□□□□□ -1.44
ERCC4-202ENST00000389138 HNRNPCL3B7ZW38 293 aa6.07□□□□□ -1.44
ERCC4-202ENST00000389138 H7BY64 318 aa6.07□□□□□ -1.44
ERCC4-202ENST00000389138 TAF4O00268 1085 aa6.07□□□□□ -1.44
ERCC4-202ENST00000389138 FTLP02792 175 aaPredicted RBP6.07□□□□□ -1.44
ERCC4-202ENST00000389138 ITGA5P08648 1049 aa6.07□□□□□ -1.44
ERCC4-202ENST00000389138 GSTP1P09211 210 aaKnown RBP6.07□□□□□ -1.44
ERCC4-202ENST00000389138 HNRNPCL4P0DMR1 293 aa6.07□□□□□ -1.44
ERCC4-202ENST00000389138 DSC2Q02487 901 aa6.07□□□□□ -1.44
ERCC4-202ENST00000389138 KCNMA1Q12791 1236 aa6.07□□□□□ -1.44
ERCC4-202ENST00000389138 MAMLD1Q13495 774 aa6.07□□□□□ -1.44
ERCC4-202ENST00000389138 IL10RAQ13651 578 aa6.07□□□□□ -1.44
ERCC4-202ENST00000389138 COL9A3Q14050 684 aaPredicted RBP6.07□□□□□ -1.44
ERCC4-202ENST00000389138 BOLA3Q53S33 107 aa6.07□□□□□ -1.44
ERCC4-202ENST00000389138 C3orf38Q5JPI3 329 aa6.07□□□□□ -1.44
ERCC4-202ENST00000389138 C8orf86Q6ZUL3 223 aa6.07□□□□□ -1.44
ERCC4-202ENST00000389138 BBS12Q6ZW61 710 aa6.07□□□□□ -1.44
ERCC4-202ENST00000389138 CYFIP1Q7L576 1253 aa6.07□□□□□ -1.44
ERCC4-202ENST00000389138 CCDC103Q8IW40 242 aa6.07□□□□□ -1.44
ERCC4-202ENST00000389138 SP8Q8IXZ3 490 aa6.07□□□□□ -1.44
ERCC4-202ENST00000389138 TAGAPQ8N103 731 aa6.07□□□□□ -1.44
ERCC4-202ENST00000389138 C17orf53Q8N3J3 647 aaPredicted RBP6.07□□□□□ -1.44
ERCC4-202ENST00000389138 SCAMP5Q8TAC9 235 aa6.07□□□□□ -1.44
ERCC4-202ENST00000389138 C17orf50Q8WW18 174 aa6.07□□□□□ -1.44
ERCC4-202ENST00000389138 ACAP3Q96P50 834 aa6.07□□□□□ -1.44
ERCC4-202ENST00000389138 STRA6Q9BX79 667 aa6.07□□□□□ -1.44
ERCC4-202ENST00000389138 ANO3Q9BYT9 981 aa6.07□□□□□ -1.44
ERCC4-202ENST00000389138 BRD8Q9H0E9 1235 aa6.07□□□□□ -1.44
ERCC4-202ENST00000389138 PABPC3Q9H361 631 aaKnown RBP6.07□□□□□ -1.44
ERCC4-202ENST00000389138 GP6Q9HCN6 339 aa6.07□□□□□ -1.44
ERCC4-202ENST00000389138 ERVK-5Q9HDB9 667 aa6.07□□□□□ -1.44
ERCC4-202ENST00000389138 FETUBQ9UGM5 382 aa6.07□□□□□ -1.44
ERCC4-202ENST00000389138 CPSF3Q9UKF6 684 aaKnown RBP6.07□□□□□ -1.44
ERCC4-202ENST00000389138 PCDHB12Q9Y5F1 795 aa6.07□□□□□ -1.44
ERCC4-202ENST00000389138 UBR2Q8IWV8 1755 aa6.06□□□□□ -1.44
ERCC4-202ENST00000389138 PRAMEF27A3QJZ7 478 aa6.06□□□□□ -1.44
ERCC4-202ENST00000389138 CTAGE9A4FU28 777 aa6.06□□□□□ -1.44
ERCC4-202ENST00000389138 URADA6NGE7 173 aa6.06□□□□□ -1.44
ERCC4-202ENST00000389138 A8MXE2 369 aa6.06□□□□□ -1.44
ERCC4-202ENST00000389138 VWA5AO00534 786 aa6.06□□□□□ -1.44
ERCC4-202ENST00000389138 DLL1O00548 723 aa6.06□□□□□ -1.44
ERCC4-202ENST00000389138 PHGDHO43175 533 aaKnown RBP6.06□□□□□ -1.44
ERCC4-202ENST00000389138 TBC1D4O60343 1298 aa6.06□□□□□ -1.44
ERCC4-202ENST00000389138 SERPINB2P05120 415 aa6.06□□□□□ -1.44
ERCC4-202ENST00000389138 COL6A2P12110 1019 aa6.06□□□□□ -1.44
ERCC4-202ENST00000389138 LCP1P13796 627 aa6.06□□□□□ -1.44
ERCC4-202ENST00000389138 GSPT1P15170 499 aaKnown RBP6.06□□□□□ -1.44
ERCC4-202ENST00000389138 AKT1P31749 480 aa6.06□□□□□ -1.44
ERCC4-202ENST00000389138 IDUAP35475 653 aa6.06□□□□□ -1.44
ERCC4-202ENST00000389138 GP5P40197 560 aa6.06□□□□□ -1.44
ERCC4-202ENST00000389138 RBM5P52756 815 aaKnown RBP eCLIP6.06□□□□□ -1.44
ERCC4-202ENST00000389138 SUMO3P55854 103 aaPredicted RBP6.06□□□□□ -1.44
ERCC4-202ENST00000389138 COG7P83436 770 aa6.06□□□□□ -1.44
ERCC4-202ENST00000389138 ARHGAP8P85298 464 aa6.06□□□□□ -1.44
ERCC4-202ENST00000389138 YWHAHQ04917 246 aaPredicted RBP6.06□□□□□ -1.44
ERCC4-202ENST00000389138 EPS8Q12929 822 aa6.06□□□□□ -1.44
ERCC4-202ENST00000389138 CBX3Q13185 183 aa6.06□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms