RNA–Protein interactions for RNA: ENST00000383820.9

RPUSD3-201, Transcript of RNA pseudouridylate synthase domain containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RPUSD3, Length 1,225 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPUSD3-201ENST00000383820 SPHK2Q9NRA0 654 aa18.95■□□□□ 0.62
RPUSD3-201ENST00000383820 BCCIPQ9P287 314 aaKnown RBP eCLIP18.95■□□□□ 0.62
RPUSD3-201ENST00000383820 DEC1Q9P2X7 70 aa18.95■□□□□ 0.62
RPUSD3-201ENST00000383820 TNRC6BQ9UPQ9 1833 aaKnown RBP18.95■□□□□ 0.62
RPUSD3-201ENST00000383820 TBC1D3BA6NDS4 549 aa18.94■□□□□ 0.62
RPUSD3-201ENST00000383820 LRRIQ3A6PVS8 624 aaPredicted RBP18.94■□□□□ 0.62
RPUSD3-201ENST00000383820 PATE3B3GLJ2 98 aa18.94■□□□□ 0.62
RPUSD3-201ENST00000383820 ADAM23O75077 832 aa18.94■□□□□ 0.62
RPUSD3-201ENST00000383820 AP1G2O75843 785 aa18.94■□□□□ 0.62
RPUSD3-201ENST00000383820 CASP1P29466 404 aa18.94■□□□□ 0.62
RPUSD3-201ENST00000383820 ZNF252P-AS1Q0IIN9 211 aa18.94■□□□□ 0.62
RPUSD3-201ENST00000383820 CUL4BQ13620 913 aa18.94■□□□□ 0.62
RPUSD3-201ENST00000383820 MAP7D1Q3KQU3 841 aa18.94■□□□□ 0.62
RPUSD3-201ENST00000383820 SH3PXD2AQ5TCZ1 1133 aa18.94■□□□□ 0.62
RPUSD3-201ENST00000383820 SYT12Q8IV01 421 aa18.94■□□□□ 0.62
RPUSD3-201ENST00000383820 FUKQ8N0W3 1084 aa18.94■□□□□ 0.62
RPUSD3-201ENST00000383820 CRYBG2Q8N1P7 616 aa18.94■□□□□ 0.62
RPUSD3-201ENST00000383820 RLN3Q8WXF3 142 aa18.94■□□□□ 0.62
RPUSD3-201ENST00000383820 NUSAP1Q9BXS6 441 aaKnown RBP18.94■□□□□ 0.62
RPUSD3-201ENST00000383820 FBXO44Q9H4M3 255 aa18.94■□□□□ 0.62
RPUSD3-201ENST00000383820 CCSER2Q9H7U1 834 aa18.94■□□□□ 0.62
RPUSD3-201ENST00000383820 CSNK1G1Q9HCP0 422 aa18.94■□□□□ 0.62
RPUSD3-201ENST00000383820 DMAC2Q9NW81 257 aa18.94■□□□□ 0.62
RPUSD3-201ENST00000383820 LAMA1P25391 3075 aa18.93■□□□□ 0.62
RPUSD3-201ENST00000383820 TCRBV21S2A2A0A5A6 115 aa18.93■□□□□ 0.62
RPUSD3-201ENST00000383820 GIPC1O14908 333 aa18.93■□□□□ 0.62
RPUSD3-201ENST00000383820 TULP3O75386 442 aa18.93■□□□□ 0.62
RPUSD3-201ENST00000383820 RPN1P04843 607 aaKnown RBP18.93■□□□□ 0.62
RPUSD3-201ENST00000383820 PROS1P07225 676 aa18.93■□□□□ 0.62
RPUSD3-201ENST00000383820 HOXD12P35452 270 aa18.93■□□□□ 0.62
RPUSD3-201ENST00000383820 SGSM1Q2NKQ1 1148 aa18.93■□□□□ 0.62
RPUSD3-201ENST00000383820 TRIM61Q5EBN2 209 aa18.93■□□□□ 0.62
RPUSD3-201ENST00000383820 RESP18Q5W5W9 173 aa18.93■□□□□ 0.62
RPUSD3-201ENST00000383820 ATL3Q6DD88 541 aa18.93■□□□□ 0.62
RPUSD3-201ENST00000383820 HTR3DQ70Z44 454 aa18.93■□□□□ 0.62
RPUSD3-201ENST00000383820 UNC93AQ86WB7 457 aa18.93■□□□□ 0.62
RPUSD3-201ENST00000383820 BBS7Q8IWZ6 715 aa18.93■□□□□ 0.62
RPUSD3-201ENST00000383820 ZNF513Q8N8E2 541 aaPredicted RBP18.93■□□□□ 0.62
RPUSD3-201ENST00000383820 TERB1Q8NA31 727 aa18.93■□□□□ 0.62
RPUSD3-201ENST00000383820 HMGB4Q8WW32 186 aa18.93■□□□□ 0.62
RPUSD3-201ENST00000383820 TAF4BQ92750 862 aa18.93■□□□□ 0.62
RPUSD3-201ENST00000383820 SDCBP2Q9H190 292 aa18.93■□□□□ 0.62
RPUSD3-201ENST00000383820 KRT82Q9NSB4 513 aa18.93■□□□□ 0.62
RPUSD3-201ENST00000383820 GMIPQ9P107 970 aa18.93■□□□□ 0.62
RPUSD3-201ENST00000383820 MBD1Q9UIS9 605 aaPredicted RBP18.93■□□□□ 0.62
RPUSD3-201ENST00000383820 PCDHA7Q9UN72 937 aa18.93■□□□□ 0.62
RPUSD3-201ENST00000383820 STARD13Q9Y3M8 1113 aa18.93■□□□□ 0.62
RPUSD3-201ENST00000383820 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa18.92■□□□□ 0.62
RPUSD3-201ENST00000383820 CLSTN1O94985 981 aa18.92■□□□□ 0.62
RPUSD3-201ENST00000383820 VNN1O95497 513 aa18.92■□□□□ 0.62
RPUSD3-201ENST00000383820 AFMP43652 599 aa18.92■□□□□ 0.62
RPUSD3-201ENST00000383820 ME1P48163 572 aa18.92■□□□□ 0.62
RPUSD3-201ENST00000383820 PEAR1Q5VY43 1037 aaPredicted RBP18.92■□□□□ 0.62
RPUSD3-201ENST00000383820 SCARA5Q6ZMJ2 495 aa18.92■□□□□ 0.62
RPUSD3-201ENST00000383820 ACOT1Q86TX2 421 aa18.92■□□□□ 0.62
RPUSD3-201ENST00000383820 TMEFF1Q8IYR6 380 aa18.92■□□□□ 0.62
RPUSD3-201ENST00000383820 CEP57L1Q8IYX8 460 aa18.92■□□□□ 0.62
RPUSD3-201ENST00000383820 PGBD3Q8N328 593 aa18.92■□□□□ 0.62
RPUSD3-201ENST00000383820 NAT16Q8N8M0 369 aa18.92■□□□□ 0.62
RPUSD3-201ENST00000383820 ZMIZ2Q8NF64 920 aa18.92■□□□□ 0.62
RPUSD3-201ENST00000383820 TMC2Q8TDI7 906 aa18.92■□□□□ 0.62
RPUSD3-201ENST00000383820 SMOQ99835 787 aa18.92■□□□□ 0.62
RPUSD3-201ENST00000383820 NACA2Q9H009 215 aa18.92■□□□□ 0.62
RPUSD3-201ENST00000383820 TLR8Q9NR97 1041 aaKnown RBP18.92■□□□□ 0.62
RPUSD3-201ENST00000383820 CIZ1Q9ULV3 898 aaPredicted RBP18.92■□□□□ 0.62
RPUSD3-201ENST00000383820 MYO18AQ92614 2054 aaKnown RBP18.91■□□□□ 0.62
RPUSD3-201ENST00000383820 AP5Z1O43299 807 aa18.91■□□□□ 0.62
RPUSD3-201ENST00000383820 KLRC4O43908 158 aa18.91■□□□□ 0.62
RPUSD3-201ENST00000383820 TLR5O60602 858 aa18.91■□□□□ 0.62
RPUSD3-201ENST00000383820 SLFN14P0C7P3 912 aa18.91■□□□□ 0.62
RPUSD3-201ENST00000383820 TRIM21P19474 475 aaKnown RBP18.91■□□□□ 0.62
RPUSD3-201ENST00000383820 PTGER3P43115 390 aa18.91■□□□□ 0.62
RPUSD3-201ENST00000383820 ANO4Q32M45 955 aa18.91■□□□□ 0.62
RPUSD3-201ENST00000383820 ZACNQ401N2 412 aa18.91■□□□□ 0.62
RPUSD3-201ENST00000383820 C10orf76Q5T2E6 689 aa18.91■□□□□ 0.62
RPUSD3-201ENST00000383820 LYSMD4Q5XG99 296 aa18.91■□□□□ 0.62
RPUSD3-201ENST00000383820 SLC23A3Q6PIS1 610 aa18.91■□□□□ 0.62
RPUSD3-201ENST00000383820 SLC36A4Q6YBV0 504 aa18.91■□□□□ 0.62
RPUSD3-201ENST00000383820 TMEM25Q86YD3 366 aa18.91■□□□□ 0.62
RPUSD3-201ENST00000383820 WASF3Q9UPY6 502 aa18.91■□□□□ 0.62
RPUSD3-201ENST00000383820 PDXKO00764 312 aa18.9■□□□□ 0.62
RPUSD3-201ENST00000383820 IKBKBO14920 756 aa18.9■□□□□ 0.62
RPUSD3-201ENST00000383820 ZSCAN22P10073 491 aaPredicted RBP18.9■□□□□ 0.62
RPUSD3-201ENST00000383820 CCDC130P13994 396 aa18.9■□□□□ 0.62
RPUSD3-201ENST00000383820 NTSR1P30989 418 aa18.9■□□□□ 0.62
RPUSD3-201ENST00000383820 NDST1P52848 882 aa18.9■□□□□ 0.62
RPUSD3-201ENST00000383820 GOLGA8FQ08AF8 430 aa18.9■□□□□ 0.62
RPUSD3-201ENST00000383820 GOLGA8DPQ0D2H9 430 aa18.9■□□□□ 0.62
RPUSD3-201ENST00000383820 STK4Q13043 487 aa18.9■□□□□ 0.62
RPUSD3-201ENST00000383820 GRAMD4Q6IC98 578 aa18.9■□□□□ 0.62
RPUSD3-201ENST00000383820 FRMD1Q8N878 549 aa18.9■□□□□ 0.62
RPUSD3-201ENST00000383820 KIAA0895Q8NCT3 520 aa18.9■□□□□ 0.62
RPUSD3-201ENST00000383820 CEP76Q8TAP6 659 aa18.9■□□□□ 0.62
RPUSD3-201ENST00000383820 SLC2A14Q8TDB8 520 aa18.9■□□□□ 0.62
RPUSD3-201ENST00000383820 SNX21Q969T3 373 aa18.9■□□□□ 0.62
RPUSD3-201ENST00000383820 WBP2Q969T9 261 aa18.9■□□□□ 0.62
RPUSD3-201ENST00000383820 XPO6Q96QU8 1125 aaKnown RBP18.9■□□□□ 0.62
RPUSD3-201ENST00000383820 KLF16Q9BXK1 252 aaPredicted RBP18.9■□□□□ 0.62
RPUSD3-201ENST00000383820 BACH2Q9BYV9 841 aa18.9■□□□□ 0.62
RPUSD3-201ENST00000383820 KCTD10Q9H3F6 313 aa18.9■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 79.6 ms