RNA–Protein interactions for RNA: ENST00000382004.7

RFX3-204, Transcript of regulatory factor X3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RFX3, Length 9,307 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFX3-204ENST00000382004 SERPINB12Q96P63 405 aa6.05□□□□□ -1.44
RFX3-204ENST00000382004 DCUN1D5Q9BTE7 237 aa6.05□□□□□ -1.44
RFX3-204ENST00000382004 PI4K2AQ9BTU6 479 aa6.05□□□□□ -1.44
RFX3-204ENST00000382004 PIM2Q9P1W9 311 aa6.05□□□□□ -1.44
RFX3-204ENST00000382004 PHTF1Q9UMS5 762 aa6.05□□□□□ -1.44
RFX3-204ENST00000382004 TDRKHQ9Y2W6 561 aaKnown RBP6.05□□□□□ -1.44
RFX3-204ENST00000382004 RPS6KL1Q9Y6S9 549 aa6.05□□□□□ -1.44
RFX3-204ENST00000382004 UHRF1BP1Q6BDS2 1440 aa6.05□□□□□ -1.44
RFX3-204ENST00000382004 MYL12BO14950 172 aa6.04□□□□□ -1.44
RFX3-204ENST00000382004 GUCY1B2O75343 617 aa6.04□□□□□ -1.44
RFX3-204ENST00000382004 COMTP21964 271 aa6.04□□□□□ -1.44
RFX3-204ENST00000382004 NRG3P56975 720 aa6.04□□□□□ -1.44
RFX3-204ENST00000382004 TRAF3Q13114 568 aa6.04□□□□□ -1.44
RFX3-204ENST00000382004 AGKQ53H12 422 aa6.04□□□□□ -1.44
RFX3-204ENST00000382004 C2CD6Q53TS8 623 aa6.04□□□□□ -1.44
RFX3-204ENST00000382004 SEL1L3Q68CR1 1132 aa6.04□□□□□ -1.44
RFX3-204ENST00000382004 LRRC74BQ6ZQY2 392 aa6.04□□□□□ -1.44
RFX3-204ENST00000382004 JAMLQ86YT9 394 aa6.04□□□□□ -1.44
RFX3-204ENST00000382004 GUF1Q8N442 669 aaKnown RBP6.04□□□□□ -1.44
RFX3-204ENST00000382004 USP13Q92995 863 aaPredicted RBP6.04□□□□□ -1.44
RFX3-204ENST00000382004 BTBD9Q96Q07 612 aa6.04□□□□□ -1.44
RFX3-204ENST00000382004 RBM12Q9NTZ6 932 aaKnown RBP6.04□□□□□ -1.44
RFX3-204ENST00000382004 CHORDC1Q9UHD1 332 aaPredicted RBP6.04□□□□□ -1.44
RFX3-204ENST00000382004 H3BMM5 538 aa6.04□□□□□ -1.44
RFX3-204ENST00000382004 KLHL41O60662 606 aa6.04□□□□□ -1.44
RFX3-204ENST00000382004 KHDRBS3O75525 346 aaKnown RBP6.04□□□□□ -1.44
RFX3-204ENST00000382004 SLC2A4P14672 509 aa6.04□□□□□ -1.44
RFX3-204ENST00000382004 RXRBP28702 533 aa6.04□□□□□ -1.44
RFX3-204ENST00000382004 PCSK1P29120 753 aa6.04□□□□□ -1.44
RFX3-204ENST00000382004 EIF2S3P41091 472 aaKnown RBP6.04□□□□□ -1.44
RFX3-204ENST00000382004 MCAMP43121 646 aa6.04□□□□□ -1.44
RFX3-204ENST00000382004 SLC11A2P49281 568 aa6.04□□□□□ -1.44
RFX3-204ENST00000382004 SCRN3Q0VDG4 424 aa6.04□□□□□ -1.44
RFX3-204ENST00000382004 NR6A1Q15406 480 aa6.04□□□□□ -1.44
RFX3-204ENST00000382004 ERMARDQ5T6L9 678 aa6.04□□□□□ -1.44
RFX3-204ENST00000382004 TBC1D10CQ8IV04 446 aa6.04□□□□□ -1.44
RFX3-204ENST00000382004 RIBC1Q8N443 379 aaPredicted RBP6.04□□□□□ -1.44
RFX3-204ENST00000382004 ZIM3Q96PE6 472 aa6.04□□□□□ -1.44
RFX3-204ENST00000382004 PPCSQ9HAB8 311 aa6.04□□□□□ -1.44
RFX3-204ENST00000382004 BARHL2Q9NY43 387 aa6.04□□□□□ -1.44
RFX3-204ENST00000382004 TOP2BQ02880 1626 aa6.04□□□□□ -1.44
RFX3-204ENST00000382004 IQCJ-SCHIP1C9J366 451 aaPredicted RBP6.04□□□□□ -1.44
RFX3-204ENST00000382004 F5H6K3 240 aa6.04□□□□□ -1.44
RFX3-204ENST00000382004 TIMM44O43615 452 aa6.04□□□□□ -1.44
RFX3-204ENST00000382004 PCDH8O95206 1070 aa6.04□□□□□ -1.44
RFX3-204ENST00000382004 MMP10P09238 476 aa6.04□□□□□ -1.44
RFX3-204ENST00000382004 HNRNPH1P31943 449 aaKnown RBP6.04□□□□□ -1.44
RFX3-204ENST00000382004 RAD23AP54725 363 aa6.04□□□□□ -1.44
RFX3-204ENST00000382004 KLRC3Q07444 240 aa6.04□□□□□ -1.44
RFX3-204ENST00000382004 SLC29A2Q14542 456 aa6.04□□□□□ -1.44
RFX3-204ENST00000382004 KCNT1Q5JUK3 1230 aa6.04□□□□□ -1.44
RFX3-204ENST00000382004 SPANXN2Q5MJ10 180 aa6.04□□□□□ -1.44
RFX3-204ENST00000382004 PPP1R18Q6NYC8 613 aa6.04□□□□□ -1.44
RFX3-204ENST00000382004 UTS2BQ765I0 119 aa6.04□□□□□ -1.44
RFX3-204ENST00000382004 RPRD1AQ96P16 312 aaPredicted RBP6.04□□□□□ -1.44
RFX3-204ENST00000382004 KATNAL1Q9BW62 490 aa6.04□□□□□ -1.44
RFX3-204ENST00000382004 CCSER1Q9C0I3 900 aa6.04□□□□□ -1.44
RFX3-204ENST00000382004 ZNF222Q9UK12 451 aa6.04□□□□□ -1.44
RFX3-204ENST00000382004 KANSL1LA0AUZ9 987 aa6.04□□□□□ -1.44
RFX3-204ENST00000382004 PRAMEF22A3QJZ6 481 aa6.04□□□□□ -1.44
RFX3-204ENST00000382004 HS6ST1O60243 411 aa6.04□□□□□ -1.44
RFX3-204ENST00000382004 MT-CO1P00395 513 aa6.04□□□□□ -1.44
RFX3-204ENST00000382004 RBP3P10745 1247 aa6.04□□□□□ -1.44
RFX3-204ENST00000382004 SERPINB8P50452 374 aa6.04□□□□□ -1.44
RFX3-204ENST00000382004 ABATP80404 500 aa6.04□□□□□ -1.44
RFX3-204ENST00000382004 PURAQ00577 322 aaKnown RBP6.04□□□□□ -1.44
RFX3-204ENST00000382004 FCHO2Q0JRZ9 810 aa6.04□□□□□ -1.44
RFX3-204ENST00000382004 SNRNP35Q16560 246 aaKnown RBP6.04□□□□□ -1.44
RFX3-204ENST00000382004 SLC18A3Q16572 532 aa6.04□□□□□ -1.44
RFX3-204ENST00000382004 TDRD5Q8NAT2 981 aaKnown RBP6.04□□□□□ -1.44
RFX3-204ENST00000382004 DNAJC1Q96KC8 554 aaKnown RBP6.04□□□□□ -1.44
RFX3-204ENST00000382004 UNKQ9C0B0 810 aaKnown RBP6.04□□□□□ -1.44
RFX3-204ENST00000382004 RIBC2Q9H4K1 309 aa6.04□□□□□ -1.44
RFX3-204ENST00000382004 SLC38A7Q9NVC3 462 aa6.04□□□□□ -1.44
RFX3-204ENST00000382004 LYVE1Q9Y5Y7 322 aa6.04□□□□□ -1.44
RFX3-204ENST00000382004 KDM5AP29375 1690 aaKnown RBP6.04□□□□□ -1.44
RFX3-204ENST00000382004 ERI2A8K979 691 aaKnown RBP6.04□□□□□ -1.44
RFX3-204ENST00000382004 M0QYT0 321 aa6.04□□□□□ -1.44
RFX3-204ENST00000382004 FOXN1O15353 648 aa6.04□□□□□ -1.44
RFX3-204ENST00000382004 RGS20O76081 388 aa6.04□□□□□ -1.44
RFX3-204ENST00000382004 EYA4O95677 639 aa6.04□□□□□ -1.44
RFX3-204ENST00000382004 FMO5P49326 533 aa6.04□□□□□ -1.44
RFX3-204ENST00000382004 EFHC1Q5JVL4 640 aa6.04□□□□□ -1.44
RFX3-204ENST00000382004 SAPCD2Q86UD0 394 aa6.04□□□□□ -1.44
RFX3-204ENST00000382004 NT5DC3Q86UY8 548 aa6.04□□□□□ -1.44
RFX3-204ENST00000382004 CBWD2Q8IUF1 395 aa6.04□□□□□ -1.44
RFX3-204ENST00000382004 CAPSLQ8WWF8 208 aa6.04□□□□□ -1.44
RFX3-204ENST00000382004 RHOBTB2Q9BYZ6 727 aa6.04□□□□□ -1.44
RFX3-204ENST00000382004 ROPN1BQ9BZX4 212 aaPredicted RBP6.04□□□□□ -1.44
RFX3-204ENST00000382004 ROPN1Q9HAT0 212 aaPredicted RBP6.04□□□□□ -1.44
RFX3-204ENST00000382004 VTI1BQ9UEU0 232 aa6.04□□□□□ -1.44
RFX3-204ENST00000382004 THOC2Q8NI27 1593 aaKnown RBP6.04□□□□□ -1.44
RFX3-204ENST00000382004 BCLAF3A2AJT9 711 aaKnown RBP6.04□□□□□ -1.44
RFX3-204ENST00000382004 FAM25EA8MYX2 175 aa6.04□□□□□ -1.44
RFX3-204ENST00000382004 EXTL3O43909 919 aa6.04□□□□□ -1.44
RFX3-204ENST00000382004 TSPAN9O75954 239 aa6.04□□□□□ -1.44
RFX3-204ENST00000382004 BIKQ13323 160 aa6.04□□□□□ -1.44
RFX3-204ENST00000382004 FAM98BQ52LJ0 330 aaKnown RBP6.04□□□□□ -1.44
RFX3-204ENST00000382004 EPC2Q52LR7 807 aa6.04□□□□□ -1.44
RFX3-204ENST00000382004 RPTNQ6XPR3 784 aa6.04□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms