RNA–Protein interactions for RNA: ENST00000381020.7

CDX2-201, Transcript of caudal type homeobox 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDX2, Length 4,053 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDX2-201ENST00000381020 ARHGEF37A1IGU5 675 aa13□□□□□ -0.33
CDX2-201ENST00000381020 CFAP69A5D8W1 941 aa13□□□□□ -0.33
CDX2-201ENST00000381020 MANSC4A6NHS7 340 aaPredicted RBP13□□□□□ -0.33
CDX2-201ENST00000381020 EDN1P05305 212 aa13□□□□□ -0.33
CDX2-201ENST00000381020 ASPAP45381 313 aa13□□□□□ -0.33
CDX2-201ENST00000381020 ZNF143P52747 638 aaPredicted RBP13□□□□□ -0.33
CDX2-201ENST00000381020 CORO7P57737 925 aa13□□□□□ -0.33
CDX2-201ENST00000381020 BMPR2Q13873 1038 aa13□□□□□ -0.33
CDX2-201ENST00000381020 PDK2Q15119 407 aa13□□□□□ -0.33
CDX2-201ENST00000381020 ERMARDQ5T6L9 678 aa13□□□□□ -0.33
CDX2-201ENST00000381020 PMF1Q6P1K2 205 aa13□□□□□ -0.33
CDX2-201ENST00000381020 KCNT2Q6UVM3 1135 aa13□□□□□ -0.33
CDX2-201ENST00000381020 LRRC6Q86X45 466 aa13□□□□□ -0.33
CDX2-201ENST00000381020 PGM2Q96G03 612 aa13□□□□□ -0.33
CDX2-201ENST00000381020 SGSM3Q96HU1 749 aa13□□□□□ -0.33
CDX2-201ENST00000381020 SNRNP25Q9BV90 132 aaKnown RBP13□□□□□ -0.33
CDX2-201ENST00000381020 TSPYL2Q9H2G4 693 aaPredicted RBP13□□□□□ -0.33
CDX2-201ENST00000381020 WDCPQ9H6R7 721 aa13□□□□□ -0.33
CDX2-201ENST00000381020 NMRK2Q9NPI5 230 aa13□□□□□ -0.33
CDX2-201ENST00000381020 SENP1Q9P0U3 644 aa13□□□□□ -0.33
CDX2-201ENST00000381020 DDX20Q9UHI6 824 aaKnown RBP13□□□□□ -0.33
CDX2-201ENST00000381020 SLC12A6Q9UHW9 1150 aa13□□□□□ -0.33
CDX2-201ENST00000381020 COL24A1Q17RW2 1714 aa13□□□□□ -0.33
CDX2-201ENST00000381020 SMIM28A0A1B0GU29 152 aa12.99□□□□□ -0.33
CDX2-201ENST00000381020 APOC4-APOC2K7ER74 178 aa12.99□□□□□ -0.33
CDX2-201ENST00000381020 PPEF2O14830 753 aa12.99□□□□□ -0.33
CDX2-201ENST00000381020 APOC2P02655 101 aa12.99□□□□□ -0.33
CDX2-201ENST00000381020 DARSP14868 501 aaKnown RBP12.99□□□□□ -0.33
CDX2-201ENST00000381020 GRM5P41594 1212 aa12.99□□□□□ -0.33
CDX2-201ENST00000381020 SNX17Q15036 470 aa12.99□□□□□ -0.33
CDX2-201ENST00000381020 MCUQ8NE86 351 aa12.99□□□□□ -0.33
CDX2-201ENST00000381020 TFB1MQ8WVM0 346 aaKnown RBP12.99□□□□□ -0.33
CDX2-201ENST00000381020 FAM111AQ96PZ2 611 aa12.99□□□□□ -0.33
CDX2-201ENST00000381020 SH3GL2Q99962 352 aa12.99□□□□□ -0.33
CDX2-201ENST00000381020 FSD1LQ9BXM9 530 aa12.99□□□□□ -0.33
CDX2-201ENST00000381020 PDLIM7Q9NR12 457 aa12.99□□□□□ -0.33
CDX2-201ENST00000381020 MTA2O94776 668 aa12.99□□□□□ -0.33
CDX2-201ENST00000381020 RABGGTBP53611 331 aa12.99□□□□□ -0.33
CDX2-201ENST00000381020 THOC5Q13769 683 aaKnown RBP12.99□□□□□ -0.33
CDX2-201ENST00000381020 TRPM8Q7Z2W7 1104 aa12.99□□□□□ -0.33
CDX2-201ENST00000381020 SDCCAG8Q86SQ7 713 aaPredicted RBP12.99□□□□□ -0.33
CDX2-201ENST00000381020 XYLT1Q86Y38 959 aa12.99□□□□□ -0.33
CDX2-201ENST00000381020 SPON2Q9BUD6 331 aa12.99□□□□□ -0.33
CDX2-201ENST00000381020 XPNPEP3Q9NQH7 507 aa12.99□□□□□ -0.33
CDX2-201ENST00000381020 SHOC2Q9UQ13 582 aa12.99□□□□□ -0.33
CDX2-201ENST00000381020 TRUB2O95900 331 aaKnown RBP12.99□□□□□ -0.33
CDX2-201ENST00000381020 RPSAP08865 295 aaKnown RBP12.99□□□□□ -0.33
CDX2-201ENST00000381020 NAA25Q14CX7 972 aa12.99□□□□□ -0.33
CDX2-201ENST00000381020 FASTKD3Q14CZ7 662 aaKnown RBP12.99□□□□□ -0.33
CDX2-201ENST00000381020 LRRC38Q5VT99 294 aa12.99□□□□□ -0.33
CDX2-201ENST00000381020 TAF2Q6P1X5 1199 aa12.99□□□□□ -0.33
CDX2-201ENST00000381020 CCDC117Q8IWD4 279 aaPredicted RBP12.99□□□□□ -0.33
CDX2-201ENST00000381020 NDUFAF2Q8N183 169 aa12.99□□□□□ -0.33
CDX2-201ENST00000381020 CELF6Q96J87 481 aaKnown RBP12.99□□□□□ -0.33
CDX2-201ENST00000381020 DPEP3Q9H4B8 488 aa12.99□□□□□ -0.33
CDX2-201ENST00000381020 SMG5Q9UPR3 1016 aaKnown RBP12.99□□□□□ -0.33
CDX2-201ENST00000381020 KBTBD13C9JR72 458 aa12.98□□□□□ -0.33
CDX2-201ENST00000381020 TULP2O00295 520 aa12.98□□□□□ -0.33
CDX2-201ENST00000381020 GPR182O15218 404 aa12.98□□□□□ -0.33
CDX2-201ENST00000381020 HCRTO43612 131 aa12.98□□□□□ -0.33
CDX2-201ENST00000381020 AVILO75366 819 aa12.98□□□□□ -0.33
CDX2-201ENST00000381020 STBD1O95210 358 aa12.98□□□□□ -0.33
CDX2-201ENST00000381020 USP17L7P0C7H9 530 aa12.98□□□□□ -0.33
CDX2-201ENST00000381020 ZDHHC24Q6UX98 284 aa12.98□□□□□ -0.33
CDX2-201ENST00000381020 EXOC3L1Q86VI1 746 aa12.98□□□□□ -0.33
CDX2-201ENST00000381020 RYBPQ8N488 228 aaPredicted RBP12.98□□□□□ -0.33
CDX2-201ENST00000381020 NPLOC4Q8TAT6 608 aa12.98□□□□□ -0.33
CDX2-201ENST00000381020 URGCPQ8TCY9 931 aa12.98□□□□□ -0.33
CDX2-201ENST00000381020 ULBP1Q9BZM6 244 aa12.98□□□□□ -0.33
CDX2-201ENST00000381020 KIF9Q9HAQ2 790 aa12.98□□□□□ -0.33
CDX2-201ENST00000381020 ARL2BPQ9Y2Y0 163 aa12.98□□□□□ -0.33
CDX2-201ENST00000381020 ECM29Q5VYK3 1845 aa12.98□□□□□ -0.33
CDX2-201ENST00000381020 H0Y3Z8 333 aa12.98□□□□□ -0.33
CDX2-201ENST00000381020 USP12O75317 370 aa12.98□□□□□ -0.33
CDX2-201ENST00000381020 LGR5O75473 907 aa12.98□□□□□ -0.33
CDX2-201ENST00000381020 CREB1P16220 341 aa12.98□□□□□ -0.33
CDX2-201ENST00000381020 EDNRBP24530 442 aa12.98□□□□□ -0.33
CDX2-201ENST00000381020 OGDHQ02218 1023 aa12.98□□□□□ -0.33
CDX2-201ENST00000381020 SREBF2Q12772 1141 aa12.98□□□□□ -0.33
CDX2-201ENST00000381020 DPYSL3Q14195 570 aa12.98□□□□□ -0.33
CDX2-201ENST00000381020 PDK1Q15118 436 aa12.98□□□□□ -0.33
CDX2-201ENST00000381020 ZCCHC9Q8N567 271 aaKnown RBP12.98□□□□□ -0.33
CDX2-201ENST00000381020 ALLCQ8N6M5 410 aa12.98□□□□□ -0.33
CDX2-201ENST00000381020 ERP27Q96DN0 273 aa12.98□□□□□ -0.33
CDX2-201ENST00000381020 MTG1Q9BT17 334 aaPredicted RBP12.98□□□□□ -0.33
CDX2-201ENST00000381020 RNF39Q9H2S5 420 aa12.98□□□□□ -0.33
CDX2-201ENST00000381020 ECT2Q9H8V3 914 aa12.98□□□□□ -0.33
CDX2-201ENST00000381020 FAM53CQ9NYF3 392 aa12.98□□□□□ -0.33
CDX2-201ENST00000381020 ST3GAL5Q9UNP4 418 aa12.98□□□□□ -0.33
CDX2-201ENST00000381020 PRRC2BQ5JSZ5 2229 aaKnown RBP12.98□□□□□ -0.33
CDX2-201ENST00000381020 CCT8L1PA6NM43 557 aa12.98□□□□□ -0.33
CDX2-201ENST00000381020 BDNFP23560 247 aa12.98□□□□□ -0.33
CDX2-201ENST00000381020 CES3Q6UWW8 571 aa12.98□□□□□ -0.33
CDX2-201ENST00000381020 BBS12Q6ZW61 710 aa12.98□□□□□ -0.33
CDX2-201ENST00000381020 NT5DC4Q86YG4 428 aa12.98□□□□□ -0.33
CDX2-201ENST00000381020 MIB1Q86YT6 1006 aa12.98□□□□□ -0.33
CDX2-201ENST00000381020 PABPC5Q96DU9 382 aaKnown RBP12.98□□□□□ -0.33
CDX2-201ENST00000381020 PGLYRP2Q96PD5 576 aa12.98□□□□□ -0.33
CDX2-201ENST00000381020 ADAM2Q99965 735 aa12.98□□□□□ -0.33
CDX2-201ENST00000381020 CDHR5Q9HBB8 845 aa12.98□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 61.9 ms