RNA–Protein interactions for RNA: ENST00000380654.8

EBF1-202, Transcript of early B cell factor 1, humanhuman

TSL 1 (best) BASIC

Gene EBF1, Length 2,345 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EBF1-202ENST00000380654 SNTG2Q9NY99 539 aa20.89■□□□□ 0.93
EBF1-202ENST00000380654 TUBGCP4Q9UGJ1 667 aa20.89■□□□□ 0.93
EBF1-202ENST00000380654 L3MBTL1Q9Y468 752 aa20.89■□□□□ 0.93
EBF1-202ENST00000380654 USH1CQ9Y6N9 552 aa20.89■□□□□ 0.93
EBF1-202ENST00000380654 GRIK4Q16099 956 aa20.88■□□□□ 0.93
EBF1-202ENST00000380654 PKDCCQ504Y2 493 aa20.88■□□□□ 0.93
EBF1-202ENST00000380654 FAM47CQ5HY64 1035 aa20.88■□□□□ 0.93
EBF1-202ENST00000380654 CCDC33Q8N5R6 958 aa20.88■□□□□ 0.93
EBF1-202ENST00000380654 C18orf25Q96B23 403 aaPredicted RBP20.88■□□□□ 0.93
EBF1-202ENST00000380654 SERAC1Q96JX3 654 aa20.88■□□□□ 0.93
EBF1-202ENST00000380654 TMEM237Q96Q45 408 aa20.88■□□□□ 0.93
EBF1-202ENST00000380654 LRRC37BQ96QE4 947 aa20.88■□□□□ 0.93
EBF1-202ENST00000380654 CYTH2Q99418 400 aa20.88■□□□□ 0.93
EBF1-202ENST00000380654 SNRNP25Q9BV90 132 aaKnown RBP20.88■□□□□ 0.93
EBF1-202ENST00000380654 ETNK1Q9HBU6 452 aa20.88■□□□□ 0.93
EBF1-202ENST00000380654 PCDH18Q9HCL0 1135 aa20.88■□□□□ 0.93
EBF1-202ENST00000380654 SSU72Q9NP77 194 aaKnown RBP20.88■□□□□ 0.93
EBF1-202ENST00000380654 PLXNB2O15031 1838 aa20.88■□□□□ 0.93
EBF1-202ENST00000380654 PAPSS1O43252 624 aaPredicted RBP20.88■□□□□ 0.93
EBF1-202ENST00000380654 FAM155BO75949 473 aa20.88■□□□□ 0.93
EBF1-202ENST00000380654 TARSP26639 723 aaKnown RBP20.88■□□□□ 0.93
EBF1-202ENST00000380654 ATXN1P54253 815 aaKnown RBP20.88■□□□□ 0.93
EBF1-202ENST00000380654 PTK7Q13308 1070 aa20.88■□□□□ 0.93
EBF1-202ENST00000380654 RIPK1Q13546 671 aa20.88■□□□□ 0.93
EBF1-202ENST00000380654 PPP6R3Q5H9R7 873 aaPredicted RBP20.88■□□□□ 0.93
EBF1-202ENST00000380654 WLSQ5T9L3 541 aa20.88■□□□□ 0.93
EBF1-202ENST00000380654 CLEC4CQ8WTT0 213 aa20.88■□□□□ 0.93
EBF1-202ENST00000380654 PTPRN2Q92932 1015 aa20.88■□□□□ 0.93
EBF1-202ENST00000380654 CFAP36Q96G28 342 aa20.88■□□□□ 0.93
EBF1-202ENST00000380654 DPEP3Q9H4B8 488 aa20.88■□□□□ 0.93
EBF1-202ENST00000380654 NPHS2Q9NP85 383 aa20.88■□□□□ 0.93
EBF1-202ENST00000380654 STAU1O95793 577 aaKnown RBP20.87■□□□□ 0.93
EBF1-202ENST00000380654 FAAP100Q0VG06 881 aa20.87■□□□□ 0.93
EBF1-202ENST00000380654 OVGP1Q12889 678 aa20.87■□□□□ 0.93
EBF1-202ENST00000380654 SEPT7Q16181 437 aaKnown RBP20.87■□□□□ 0.93
EBF1-202ENST00000380654 PLEKHG4Q58EX7 1191 aa20.87■□□□□ 0.93
EBF1-202ENST00000380654 VSIG1Q86XK7 387 aa20.87■□□□□ 0.93
EBF1-202ENST00000380654 SHCBP1Q8NEM2 672 aa20.87■□□□□ 0.93
EBF1-202ENST00000380654 AGAP11Q8TF27 550 aa20.87■□□□□ 0.93
EBF1-202ENST00000380654 EIF2AQ9BY44 585 aaKnown RBP20.87■□□□□ 0.93
EBF1-202ENST00000380654 KATNBL1Q9H079 304 aa20.87■□□□□ 0.93
EBF1-202ENST00000380654 CDKN2AIPQ9NXV6 580 aaPredicted RBP20.87■□□□□ 0.93
EBF1-202ENST00000380654 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP20.87■□□□□ 0.93
EBF1-202ENST00000380654 SMAPO00193 183 aa20.87■□□□□ 0.93
EBF1-202ENST00000380654 APOL1O14791 398 aa20.87■□□□□ 0.93
EBF1-202ENST00000380654 ATP2A2P16615 1042 aaKnown RBP20.87■□□□□ 0.93
EBF1-202ENST00000380654 SDC4P31431 198 aa20.87■□□□□ 0.93
EBF1-202ENST00000380654 GRM5P41594 1212 aa20.87■□□□□ 0.93
EBF1-202ENST00000380654 HDAC4P56524 1084 aa20.87■□□□□ 0.93
EBF1-202ENST00000380654 BCAR1P56945 870 aa20.87■□□□□ 0.93
EBF1-202ENST00000380654 CYLDQ9NQC7 956 aa20.87■□□□□ 0.93
EBF1-202ENST00000380654 HAO1Q9UJM8 370 aa20.87■□□□□ 0.93
EBF1-202ENST00000380654 GJD2Q9UKL4 321 aa20.87■□□□□ 0.93
EBF1-202ENST00000380654 KIAA1257Q9ULG3 409 aa20.87■□□□□ 0.93
EBF1-202ENST00000380654 NUMBLQ9Y6R0 609 aa20.87■□□□□ 0.93
EBF1-202ENST00000380654 HOXA11P31270 313 aaPredicted RBP20.86■□□□□ 0.93
EBF1-202ENST00000380654 SLC8A1P32418 973 aa20.86■□□□□ 0.93
EBF1-202ENST00000380654 YWHAZP63104 245 aaKnown RBP20.86■□□□□ 0.93
EBF1-202ENST00000380654 ZNF200P98182 395 aaPredicted RBP20.86■□□□□ 0.93
EBF1-202ENST00000380654 SLC6A3Q01959 620 aa20.86■□□□□ 0.93
EBF1-202ENST00000380654 SETDB1Q15047 1291 aa20.86■□□□□ 0.93
EBF1-202ENST00000380654 KYAT1Q16773 422 aa20.86■□□□□ 0.93
EBF1-202ENST00000380654 MAP7D3Q8IWC1 876 aa20.86■□□□□ 0.93
EBF1-202ENST00000380654 GPRC5AQ8NFJ5 357 aa20.86■□□□□ 0.93
EBF1-202ENST00000380654 CCDC110Q8TBZ0 833 aa20.86■□□□□ 0.93
EBF1-202ENST00000380654 SLC35F5Q8WV83 523 aa20.86■□□□□ 0.93
EBF1-202ENST00000380654 UTP4Q969X6 686 aaKnown RBP20.86■□□□□ 0.93
EBF1-202ENST00000380654 SLC4A5Q9BY07 1137 aa20.86■□□□□ 0.93
EBF1-202ENST00000380654 FAM49AQ9H0Q0 323 aaPredicted RBP20.86■□□□□ 0.93
EBF1-202ENST00000380654 CDHR5Q9HBB8 845 aa20.86■□□□□ 0.93
EBF1-202ENST00000380654 VTA1Q9NP79 307 aa20.86■□□□□ 0.93
EBF1-202ENST00000380654 SETD4Q9NVD3 440 aa20.86■□□□□ 0.93
EBF1-202ENST00000380654 CHADO15335 359 aa20.86■□□□□ 0.93
EBF1-202ENST00000380654 SNAI1O95863 264 aaPredicted RBP20.86■□□□□ 0.93
EBF1-202ENST00000380654 MT-ND3P03897 115 aa20.86■□□□□ 0.93
EBF1-202ENST00000380654 BOLA3Q53S33 107 aa20.86■□□□□ 0.93
EBF1-202ENST00000380654 C7orf31Q8N865 590 aa20.86■□□□□ 0.93
EBF1-202ENST00000380654 SLC44A1Q8WWI5 657 aa20.86■□□□□ 0.93
EBF1-202ENST00000380654 TRIM56Q9BRZ2 755 aaKnown RBP20.86■□□□□ 0.93
EBF1-202ENST00000380654 COL1A2P08123 1366 aa20.85■□□□□ 0.93
EBF1-202ENST00000380654 LOC102724159A0A0B4J2E5 919 aa20.85■□□□□ 0.93
EBF1-202ENST00000380654 LPXNO60711 386 aa20.85■□□□□ 0.93
EBF1-202ENST00000380654 ZBED1O96006 694 aa20.85■□□□□ 0.93
EBF1-202ENST00000380654 APRTP07741 180 aa20.85■□□□□ 0.93
EBF1-202ENST00000380654 PDK2Q15119 407 aa20.85■□□□□ 0.93
EBF1-202ENST00000380654 PWP2Q15269 919 aaKnown RBP20.85■□□□□ 0.93
EBF1-202ENST00000380654 ACCSLQ4AC99 568 aa20.85■□□□□ 0.93
EBF1-202ENST00000380654 TMEM110Q86TL2 294 aa20.85■□□□□ 0.93
EBF1-202ENST00000380654 PLAC1Q9HBJ0 212 aa20.85■□□□□ 0.93
EBF1-202ENST00000380654 PAK5Q9P286 719 aa20.85■□□□□ 0.93
EBF1-202ENST00000380654 DCTN4Q9UJW0 460 aa20.85■□□□□ 0.93
EBF1-202ENST00000380654 IKBKGQ9Y6K9 419 aa20.85■□□□□ 0.93
EBF1-202ENST00000380654 DPYSL4O14531 572 aa20.84■□□□□ 0.93
EBF1-202ENST00000380654 C1QAP02745 245 aa20.84■□□□□ 0.93
EBF1-202ENST00000380654 INHBAP08476 426 aa20.84■□□□□ 0.93
EBF1-202ENST00000380654 PYGBP11216 843 aa20.84■□□□□ 0.93
EBF1-202ENST00000380654 ALADP13716 330 aa20.84■□□□□ 0.93
EBF1-202ENST00000380654 SKIV2L2P42285 1042 aaKnown RBP20.84■□□□□ 0.93
EBF1-202ENST00000380654 SNAPC2Q13487 334 aa20.84■□□□□ 0.93
EBF1-202ENST00000380654 SLC9A4Q6AI14 798 aa20.84■□□□□ 0.93
Retrieved 100 of 20,778 RNA–protein pairs in 43.4 ms