RNA–Protein interactions for RNA: ENST00000380358.8

CHD3-203, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

TSL 2 BASIC

Gene CHD3, Length 7,356 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-203ENST00000380358 GRIN3AQ8TCU5 1115 aa12.82□□□□□ -0.36
CHD3-203ENST00000380358 REEP2Q9BRK0 252 aa12.82□□□□□ -0.36
CHD3-203ENST00000380358 PACSIN1Q9BY11 444 aa12.82□□□□□ -0.36
CHD3-203ENST00000380358 ABCG4Q9H172 646 aa12.82□□□□□ -0.36
CHD3-203ENST00000380358 TRIT1Q9H3H1 467 aaKnown RBP12.82□□□□□ -0.36
CHD3-203ENST00000380358 SH3GLB2Q9NR46 395 aa12.82□□□□□ -0.36
CHD3-203ENST00000380358 NMRK1Q9NWW6 199 aa12.82□□□□□ -0.36
CHD3-203ENST00000380358 TFR2Q9UP52 801 aa12.82□□□□□ -0.36
CHD3-203ENST00000380358 CSHL1Q14406 222 aa12.81□□□□□ -0.36
CHD3-203ENST00000380358 AP5B1Q2VPB7 878 aa12.81□□□□□ -0.36
CHD3-203ENST00000380358 ARL6IP4Q66PJ3 421 aaKnown RBP12.81□□□□□ -0.36
CHD3-203ENST00000380358 FAM45AQ8TCE6 357 aa12.81□□□□□ -0.36
CHD3-203ENST00000380358 TBCDQ9BTW9 1192 aa12.81□□□□□ -0.36
CHD3-203ENST00000380358 DCP1AQ9NPI6 582 aaPredicted RBP12.81□□□□□ -0.36
CHD3-203ENST00000380358 PSMB9P28065 219 aa12.81□□□□□ -0.36
CHD3-203ENST00000380358 MMRN1Q13201 1228 aa12.81□□□□□ -0.36
CHD3-203ENST00000380358 TRIM16LQ309B1 348 aa12.81□□□□□ -0.36
CHD3-203ENST00000380358 CASP10Q92851 521 aa12.81□□□□□ -0.36
CHD3-203ENST00000380358 JSRP1Q96MG2 331 aaPredicted RBP12.81□□□□□ -0.36
CHD3-203ENST00000380358 TOR4AQ9NXH8 423 aa12.81□□□□□ -0.36
CHD3-203ENST00000380358 NCKAP1Q9Y2A7 1128 aa12.81□□□□□ -0.36
CHD3-203ENST00000380358 DNALI1O14645 258 aaPredicted RBP12.81□□□□□ -0.36
CHD3-203ENST00000380358 TALDO1P37837 337 aa12.81□□□□□ -0.36
CHD3-203ENST00000380358 BYSLQ13895 437 aaKnown RBP12.81□□□□□ -0.36
CHD3-203ENST00000380358 RASGRP2Q7LDG7 609 aa12.81□□□□□ -0.36
CHD3-203ENST00000380358 PARP8Q8N3A8 854 aa12.81□□□□□ -0.36
CHD3-203ENST00000380358 AASDHPPTQ9NRN7 309 aa12.81□□□□□ -0.36
CHD3-203ENST00000380358 FAM20BO75063 409 aa12.81□□□□□ -0.36
CHD3-203ENST00000380358 CCT8P50990 548 aa12.81□□□□□ -0.36
CHD3-203ENST00000380358 ANXA11P50995 505 aaKnown RBP12.81□□□□□ -0.36
CHD3-203ENST00000380358 ZCCHC8Q6NZY4 707 aaKnown RBP12.81□□□□□ -0.36
CHD3-203ENST00000380358 C16orf46Q6P387 395 aa12.81□□□□□ -0.36
CHD3-203ENST00000380358 NLNQ9BYT8 704 aa12.81□□□□□ -0.36
CHD3-203ENST00000380358 PRKD2Q9BZL6 878 aa12.81□□□□□ -0.36
CHD3-203ENST00000380358 PPP2R3BQ9Y5P8 575 aa12.81□□□□□ -0.36
CHD3-203ENST00000380358 TPH1P17752 444 aa12.81□□□□□ -0.36
CHD3-203ENST00000380358 PSMA4P25789 261 aaKnown RBP12.81□□□□□ -0.36
CHD3-203ENST00000380358 MYBPC1Q00872 1141 aa12.81□□□□□ -0.36
CHD3-203ENST00000380358 KYAT1Q16773 422 aa12.81□□□□□ -0.36
CHD3-203ENST00000380358 TARS2Q9BW92 718 aaKnown RBP12.81□□□□□ -0.36
CHD3-203ENST00000380358 KLHL3Q9UH77 587 aa12.81□□□□□ -0.36
CHD3-203ENST00000380358 NUDT5Q9UKK9 219 aa12.81□□□□□ -0.36
CHD3-203ENST00000380358 DUSP12Q9UNI6 340 aa12.81□□□□□ -0.36
CHD3-203ENST00000380358 CPDO75976 1380 aa12.81□□□□□ -0.36
CHD3-203ENST00000380358 UGP2Q16851 508 aa12.81□□□□□ -0.36
CHD3-203ENST00000380358 AASDHQ4L235 1098 aaPredicted RBP12.81□□□□□ -0.36
CHD3-203ENST00000380358 WLSQ5T9L3 541 aa12.81□□□□□ -0.36
CHD3-203ENST00000380358 RMND5AQ9H871 391 aa12.81□□□□□ -0.36
CHD3-203ENST00000380358 ZNHIT2Q9UHR6 403 aa12.81□□□□□ -0.36
CHD3-203ENST00000380358 ARF3P61204 181 aaPredicted RBP12.8□□□□□ -0.36
CHD3-203ENST00000380358 ARF1P84077 181 aaKnown RBP12.8□□□□□ -0.36
CHD3-203ENST00000380358 PLD1Q13393 1074 aa12.8□□□□□ -0.36
CHD3-203ENST00000380358 ATP6AP1LQ52LC2 224 aa12.8□□□□□ -0.36
CHD3-203ENST00000380358 OTUD3Q5T2D3 398 aaPredicted RBP12.8□□□□□ -0.36
CHD3-203ENST00000380358 RPTNQ6XPR3 784 aa12.8□□□□□ -0.36
CHD3-203ENST00000380358 RANBP17Q9H2T7 1088 aaKnown RBP12.8□□□□□ -0.36
CHD3-203ENST00000380358 PSMC3IPQ9P2W1 217 aaPredicted RBP12.8□□□□□ -0.36
CHD3-203ENST00000380358 USP27XA6NNY8 438 aa12.8□□□□□ -0.36
CHD3-203ENST00000380358 IL2P60568 153 aa12.8□□□□□ -0.36
CHD3-203ENST00000380358 ARMCX4Q5H9R4 360 aa12.8□□□□□ -0.36
CHD3-203ENST00000380358 PDZK1Q5T2W1 519 aa12.8□□□□□ -0.36
CHD3-203ENST00000380358 OR10G6Q8NH81 332 aa12.8□□□□□ -0.36
CHD3-203ENST00000380358 ZNF671Q8TAW3 534 aa12.8□□□□□ -0.36
CHD3-203ENST00000380358 ATP6V1G3Q96LB4 118 aa12.8□□□□□ -0.36
CHD3-203ENST00000380358 FAM111AQ96PZ2 611 aa12.8□□□□□ -0.36
CHD3-203ENST00000380358 CGRRF1Q99675 332 aa12.8□□□□□ -0.36
CHD3-203ENST00000380358 CCDC134Q9H6E4 229 aa12.8□□□□□ -0.36
CHD3-203ENST00000380358 BARHL2Q9NY43 387 aa12.8□□□□□ -0.36
CHD3-203ENST00000380358 ANGPT4Q9Y264 503 aa12.8□□□□□ -0.36
CHD3-203ENST00000380358 TBC1D3BA6NDS4 549 aa12.8□□□□□ -0.36
CHD3-203ENST00000380358 SERPINH1P50454 418 aaKnown RBP12.8□□□□□ -0.36
CHD3-203ENST00000380358 CLCN3P51790 818 aa12.8□□□□□ -0.36
CHD3-203ENST00000380358 PTSQ03393 145 aa12.8□□□□□ -0.36
CHD3-203ENST00000380358 RNASE12Q5GAN4 147 aaKnown RBP12.8□□□□□ -0.36
CHD3-203ENST00000380358 DSELQ8IZU8 1212 aa12.8□□□□□ -0.36
CHD3-203ENST00000380358 GMCL1Q96IK5 515 aa12.8□□□□□ -0.36
CHD3-203ENST00000380358 VPS45Q9NRW7 570 aa12.8□□□□□ -0.36
CHD3-203ENST00000380358 TRAPPC8Q9Y2L5 1435 aa12.8□□□□□ -0.36
CHD3-203ENST00000380358 PRAG1Q86YV5 1406 aa12.8□□□□□ -0.36
CHD3-203ENST00000380358 RFFLQ8WZ73 363 aa12.8□□□□□ -0.36
CHD3-203ENST00000380358 ZDHHC6Q9H6R6 413 aa12.8□□□□□ -0.36
CHD3-203ENST00000380358 ACTR8Q9H981 624 aa12.8□□□□□ -0.36
CHD3-203ENST00000380358 MRPS7Q9Y2R9 242 aaKnown RBP12.8□□□□□ -0.36
CHD3-203ENST00000380358 RPS6KL1Q9Y6S9 549 aa12.8□□□□□ -0.36
CHD3-203ENST00000380358 H7C4K7 107 aa12.8□□□□□ -0.36
CHD3-203ENST00000380358 RPS6KA4O75676 772 aa12.8□□□□□ -0.36
CHD3-203ENST00000380358 TSPAN9O75954 239 aa12.8□□□□□ -0.36
CHD3-203ENST00000380358 CTCFP49711 727 aaPredicted RBP12.8□□□□□ -0.36
CHD3-203ENST00000380358 ITGA8P53708 1063 aa12.8□□□□□ -0.36
CHD3-203ENST00000380358 NRG3P56975 720 aa12.8□□□□□ -0.36
CHD3-203ENST00000380358 OLFML2AQ68BL7 652 aa12.8□□□□□ -0.36
CHD3-203ENST00000380358 KCNV1Q6PIU1 500 aa12.8□□□□□ -0.36
CHD3-203ENST00000380358 ELOVL6Q9H5J4 265 aa12.8□□□□□ -0.36
CHD3-203ENST00000380358 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP12.8□□□□□ -0.36
CHD3-203ENST00000380358 ERAP1Q9NZ08 941 aa12.8□□□□□ -0.36
CHD3-203ENST00000380358 BIRC5O15392 142 aa12.79□□□□□ -0.36
CHD3-203ENST00000380358 HIST1H2ABP04908 130 aa12.79□□□□□ -0.36
CHD3-203ENST00000380358 TAF6P49848 677 aa12.79□□□□□ -0.36
CHD3-203ENST00000380358 CYLC2Q14093 348 aaPredicted RBP12.79□□□□□ -0.36
CHD3-203ENST00000380358 PIGHQ14442 188 aaPredicted RBP12.79□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms